Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0356 ATGGCTGAATCTAGCTCGCCAGCTCACTCGTTCGGCCAGACCGAGATTAACTGGGACAAGCTTGATAAAACTAAATTTTATGTCGTAGGAGCCGGTCTGTTTACAGGGGTTACAGTTGCTCTGTACCCTGTTTCTGTCGTGAAAACGAGGCTACAGGTTGCTACAAAGGAATCTGCTGAGAAAAATGCATTTTCCGTCATTAGAGGAATATTGAAAAATGATGGCATTCCTGGTCTCTACAGAGGGTTTGGTACTGTAATTACTGGTGCCATTCCTTCCAGGATTATTTTTCTTACTGCTTTAGAGACCACAAAAGTGGGAGCCTTCAAGGCACTTGAGCCGTTCAAATTTTCTGAACCTACTCAGGCAGCCATAGCAAATGGATTAGGTGGTATGGCAGCTTCACTTTTTTCTCAAGCCGTTTTTGTTCCAATTGATGTGATCAGCCAAAAGTTAATGGTGCAAGGATACTCTGGCCATGCAAAATATAGTGGCGGTTTAGATGTTGCTCGTAAGGTCATAAAATCTGATGGCATTAAAGGATTATATAGAGGATTTGGTTTATCCGTTATGACTTATTCACCATCTAGTGCTGTATGGTGGGCAAGTTATGGTTCAAGTCAACGAGTCATATGGAGGCTCTTAGATGATGGCAATAAATTTGAAGAATCAAATTCCAGCGATGGTAAAATAGTGTTAGTTCAAGCAGCTGGTGGGATAATCGCTGGTGCAACTGCATCCTGTATCACCACACCCTTAGACACCATAAAGACACGCTTGCAGGTAATTGGGCATGAAAAGAAGAGCACTGCCAGGCAAGTAGTTAGAAGCTTAATTGCAGATGATGGATGGAAAGGATTTTACAAAGGATTGGGGCCAAGATTTTTCAGCATGTCAGCATGGGGAACCTCAATGATATTGACCTACGAATATTTGAAACGCGTGTGTGCAACGAATTAA 960 42.4 MAESSSPAHSFGQTEINWDKLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVATKESAEKNAFSVIRGILKNDGIPGLYRGFGTVITGAIPSRIIFLTALETTKVGAFKALEPFKFSEPTQAAIANGLGGMAASLFSQAVFVPIDVISQKLMVQGYSGHAKYSGGLDVARKVIKSDGIKGLYRGFGLSVMTYSPSSAVWWASYGSSQRVIWRLLDDGNKFEESNSSDGKIVLVQAAGGIIAGATASCITTPLDTIKTRLQVIGHEKKSTARQVVRSLIADDGWKGFYKGLGPRFFSMSAWGTSMILTYEYLKRVCATN 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1743377 1745957 + Conep11aG0036600.1 Cone11ag0356 447608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0356 319 PRINTS Mitochondrial carrier protein signature 239 261 IPR002067 GO:0055085(InterPro)
Cone11ag0356 319 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085(InterPro)
Cone11ag0356 319 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085(InterPro)
Cone11ag0356 319 FunFam Mitochondrial substrate carrier family protein 27 319 - -
Cone11ag0356 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Cone11ag0356 319 SUPERFAMILY Mitochondrial carrier 19 312 IPR023395 -
Cone11ag0356 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 315 IPR018108 -
Cone11ag0356 319 Gene3D Mitochondrial carrier domain 26 319 IPR023395 -
Cone11ag0356 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 107 IPR018108 -
Cone11ag0356 319 Pfam Mitochondrial carrier protein 234 316 IPR018108 -
Cone11ag0356 319 Pfam Mitochondrial carrier protein 31 106 IPR018108 -
Cone11ag0356 319 Pfam Mitochondrial carrier protein 124 211 IPR018108 -
Cone11ag0356 319 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 318 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0356 Cone-Chr11:1743377 Cone7ag1234 Cone-Chr7:9152009 5.81E-85 dispersed
Cone15ag0699 Cone-Chr15:3802527 Cone11ag0356 Cone-Chr11:1743377 1.14E-102 transposed
Cone11ag0356 Cone-Chr11:1743377 Cone18ag1144 Cone-Chr18:8246994 4.11E-222 wgd
Cone11ag0356 Cone-Chr11:1743377 Cone6ag0430 Cone-Chr6:2086342 3.67E-13 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0356 K15121 - rcu:8260256 517.309