Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0361 ATGTCGAGAAAATTGAAGGACAATGGACGGGGGTCGAAGCCGGGTCCATTCCACATATTCTCTACGGCTAAGTACTCTACCAGTAAGAACCGTAGGCCTTCTTTGCCGCCAAATTTGATTCGCTACTTTTCATTGGCTGAGATCAAACTCGCCACAAACAACTTCACTGACAATCTACTTGTCGGCCGAGGAGGCTTTGGTAACTTGTACAAAGGCTCAATTGATAATGGGTCGACCCAGGTTGCAATCAAGCGGTCCATTCCCAGTTCACATCAAGGTATCCAGGAGTTCCAGACCGAGATATTGATAATCTCCCAACTACGCCATGATAATCTCTTGTCCCTGATTGGATATTGTGATGATCATGGAGAGATGATCTCAGTATACGAGTACATGTCACGTGGGTCCCTGCATGATCACCTTCACAATGAAAACTCCCTGCCTCTTTCATGGAATCAACGGCTCGAGATCTGTATAGGAGTTGCACGAGTGCTTCATTACCTCCACATAGGTGTAAAGGGCACGATCATCTACCGTGACGTTAAGACCAGCAATATTTTATTGGACGATAAATGGATGGTTAAACTTGGTGATTTCGGGTTGTCAAAGGTGGGTCCTAATACTAGCATGTCCAGTTCCAATTCCAGACCACAACTCAAGAGAGTTAAGACCCTTGTTAAGGGTACTCGTGGGTACTTAGATCCAGAGTACTTCAACAATTCGGAGCTGACCGAAAAATCCGATGTGTACTCATTCGGTGTAGTATTATTAGAAGTGTTGTGCGCTCAATCTCCTATAATTTGTATGGAGGATGGAAGCACGGAGCACATTTCTAACTGGGTCTATGGCTGGCTCTGTGAAGACAAGCTTGATGAAGTCATCGATCCCCATTTGAAAGGTACGGTTGCACACGATTCTATGATGGAATTCATAGAAATTGCGATGAGCTGTTTGTCTCATAAAGGAACCGAGCGACCTCATATGAACGAGGTGACATTGAGCCTTGAGCATGCACTAGAGTTGCAGGACAACTCGTCGAATCAAGATCACATGAATAAAGATATGGTTAATGGTGGGGAAGAAGTTGATTCAATTGTTGATCATGAGGAGGCAGCTGAGGTGGTTGGATCGAGTTATTCTCAAGATATGCCTTGTGATGATCCATTGACTTATGATTCCAAAGACGGTACTATTGCTTCTTTGAGAAGTGAGTTGGCTCGAGTGAAACAAGACCGAGATAGATTGAGTGAAGAGTTAGAGCATATGCGTACACAACGTGCGGAAGAGTTGAAGGGAATTAGAGCACAACAACTCGAAGCACAATCAGATATGGAAGCTTGA 1341 44.37 MSRKLKDNGRGSKPGPFHIFSTAKYSTSKNRRPSLPPNLIRYFSLAEIKLATNNFTDNLLVGRGGFGNLYKGSIDNGSTQVAIKRSIPSSHQGIQEFQTEILIISQLRHDNLLSLIGYCDDHGEMISVYEYMSRGSLHDHLHNENSLPLSWNQRLEICIGVARVLHYLHIGVKGTIIYRDVKTSNILLDDKWMVKLGDFGLSKVGPNTSMSSSNSRPQLKRVKTLVKGTRGYLDPEYFNNSELTEKSDVYSFGVVLLEVLCAQSPIICMEDGSTEHISNWVYGWLCEDKLDEVIDPHLKGTVAHDSMMEFIEIAMSCLSHKGTERPHMNEVTLSLEHALELQDNSSNQDHMNKDMVNGGEEVDSIVDHEEAAEVVGSSYSQDMPCDDPLTYDSKDGTIASLRSELARVKQDRDRLSEELEHMRTQRAEELKGIRAQQLEAQSDMEA 446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1766270 1767610 - Conep11aG0037100.1 Cone11ag0361 447613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0361 446 MobiDBLite consensus disorder prediction 375 394 - -
Cone11ag0361 446 SUPERFAMILY Protein kinase-like (PK-like) 29 335 IPR011009 -
Cone11ag0361 446 MobiDBLite consensus disorder prediction 405 433 - -
Cone11ag0361 446 SMART serkin_6 55 340 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0361 446 MobiDBLite consensus disorder prediction 405 446 - -
Cone11ag0361 446 FunFam receptor-like protein kinase FERONIA 19 131 - -
Cone11ag0361 446 Gene3D Transferase(Phosphotransferase) domain 1 132 364 - -
Cone11ag0361 446 ProSitePatterns Protein kinases ATP-binding region signature. 61 84 IPR017441 GO:0005524(InterPro)
Cone11ag0361 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0361 446 Coils Coil 398 425 - -
Cone11ag0361 446 ProSiteProfiles Protein kinase domain profile. 55 340 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0361 446 Gene3D Phosphorylase Kinase; domain 1 40 131 - -
Cone11ag0361 446 Pfam Protein kinase domain 60 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0361 446 PANTHER OS07G0166700 PROTEIN 43 342 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Cone11ag0361 446 FunFam Receptor-like protein kinase FERONIA 132 357 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0361 Cone-Chr11:1766270 Cone18ag1141 Cone-Chr18:8218344 8.59E-162 dispersed
Cone2ag0493 Cone-Chr2:2676203 Cone11ag0361 Cone-Chr11:1766270 4.03E-58 dispersed
Cone11ag0360 Cone-Chr11:1759305 Cone11ag0361 Cone-Chr11:1766270 4.88E-112 tandem
Cone11ag0361 Cone-Chr11:1766270 Cone11ag0362 Cone-Chr11:1773508 1.98E-104 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81877 PF00133 tRNA-synt_1 2.50E-200 CL0039 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0361 - - - 0.0