Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0362 ATGCCTAACCACAAAACCATCAAGTATCTTCTACACACTACCCTCGCCCACCTCCTCTTCCTCCACCACCTCACCACCACCGCATCCGCCGCCGACAACATCCTCCTCAACTGCGGCTCCTCTGGCGACTCCACTGCCTCCGACACCGGCACCTGGATCGGAGACACTGACTCAAAATTCCTCTCCCAAAACGGAGCGGCCTCACAAGCACTAACTCAAGCCTCCTCCGTCCCTCAAACCCCTTACTCCACCGCCCGCCTCTCCTCCTCCGCCTTCACCTACTCCTTTCCCCTCACCCCCGGCCAAAAATTCCTCCGCCTCTACTTCTACCCTGCTCCTTACTCCCCCACCTTCTCCCGCCTCAACGCTATCTTCACAGTCAAAACAGATCGCTTCACCCTCCTCCAGAACTTCAACGCTTCCCTTCACGCCGATTCGTCTAACACCCCCACCATCTTTGAGGAATACTCCATCAACGTTTTCGACCAAATCCTCAACTTAACTTTTGCTCCAAACTCCTCTGTTCCTAACTCATACGCTTTCATCAACGGCATCGAAATCGTCTCTATGCCCACAAATCTTTACTACAAAGAATCTACCTTAATCGGACAAGGCAGAGCTTCTTATAGTATGAATAACTACACGGCACTTGAAATGGCTTATCGGATTAATATCGGGGGGGCCGCCATATCTCCAGTTGAAGATACTGGCATGTTCCGAAGATGGTCTTTAGAAACAGAATACTTAACTTCATATTATGAAGATTCTTCCCCATACAACAATAGCATTACCCTTAAGTATACTCTATCAGTTCCGAGTTACACCGCACCTAAAGATGTTTATACAACTGCTAGAAGTATGGGAAGGAACATGACAATGAACAAGAGCTTCAATCTCACATGGAGCTTCCCTGTAGACTCCGGATTCTCTTACTTGGTCAGGATGCATTTTTGCGAGTTTGAAGCAGAGATTGTTAAAGTGGGTCAGAGAGTTTTTAATATATATCTGGCTAATCAATCTGCCGCGAAAGCTTTTGATGTTTTCCGATCCGCCGGAGGGAGAGAGATTCCGTATTTTCGTGACTACCTAGTTTTCTTGCTGAATAGTGGAGGTGATGAGAAGAGAGTGAATCTCTCTGTCGAGCTTCAATCATATCCAGATAGGTTGACAACAGATTATTATGACGCTATTTTGAATGGGATCGAGATTTTTAAACTCAACGACACGACCGGTAATCTTGCCGGAGCGAACCCGAACCCACTTCCGGCCACGACTCAACAACCTCGTACGGAATCAAATAAGTCGAAGAGCAAGTCGCCGGTTGTGATCGGTTCGGTTGTTGGTGGGTTTGGTTTTCTCGCCGTGGTCGGGTTTTTGCTTCTTGGGTTCTTTATTTTCCGGCGACGAGTTGGAAGTTCTGAGAAGCATAAGGGGTCCAGTACTGACGGGACTACTACATTGTGGGGCCTGTTTTCATATTCGACGACCAAGTCAACGAAGACACGTGGGTCGTCGTCTCTACCTTCCGATTTGTGTCGTTACTTTTCATTGGCTGAAATCAAGGCTGCTACTAATGATTTTGATGGCGTGCTCATTGTTGGTGCTGGAGGGTTTGGTGACGTGTACAAAGGGTATGTGAACATGGATGGTGTGACTATACGCATCGCGATCAAACGGTTAAAACCCGGTTCGGAACAAGGGGCCAATGAGTTCAAGACCGAGATCAAGATGCTCTCCCAACTCCGACACCTTCATTTGGTCTCTTTGATCGGATATTGCAACGAAGGTGAAGAGATGATCTTGGTTTATGATTACATGGCACGTGGGACCCTCCGAGATCATCTCTACGGTAAAGAGAATCCATCCCTACCGTGGATTCAACGATTGGAGATTTGTATTGGAGCGGCGCGTGGGCTCCATTACCTTCACACGGGCGCAAAGCACACGATCATTCACCGTGACATGAAAACAACCAACATTCTATTGGACGAGAAATGGGTGGCCAAGGTTTCGGATTTCGGTTTGTCCAGAGTGGGGCCGACCGACACTTCCAAATCACACGTAAGCACGGTGGTCAAGGGTAGTTTTGGGTATTTGGACCCAGAATACTACCGACGTCATCAACTGACCGAAAAATCTGATGTGTACTCGTTTGGAGTAGTACTATGTGAAGTACTATGCGCTAGACCACCTGTGATTCGTACCATGGATAAGGAGCAAGTGAGCCTTCCCACATGGGTCCAGAGATGCTACGCTCGGAACATGCTCGAACAGATCGTAGATCGCACAATGAAGGATCAAGTGGGCCTAAAGTGTTTGGGGAAATTCGTGGAAACCGCGGTGAGTTGCATAAGGGATAACGGAACGGAACGACCATCCATGAATGACGTGGTGTGGGGGCTCGAGTTCGCATTGCAGCTGCAGCAGAGCACCACCACTGCAGGGGAGAATGGAACTAAATGCGGGGTCCACAACGATGAAAAAGAAGAAGAAAAAGAAGCCATGCCTGTAAGTACAGAAATGAACGTCAGTCGCGAGGAGATTTATAGTAGCAGTCCAGATGTAGGGGTTGGTGCGGATTCGAAAAGGCAGTGGAGCATTAACTGTAATGTCAAGTAG 2619 48.26 MPNHKTIKYLLHTTLAHLLFLHHLTTTASAADNILLNCGSSGDSTASDTGTWIGDTDSKFLSQNGAASQALTQASSVPQTPYSTARLSSSAFTYSFPLTPGQKFLRLYFYPAPYSPTFSRLNAIFTVKTDRFTLLQNFNASLHADSSNTPTIFEEYSINVFDQILNLTFAPNSSVPNSYAFINGIEIVSMPTNLYYKESTLIGQGRASYSMNNYTALEMAYRINIGGAAISPVEDTGMFRRWSLETEYLTSYYEDSSPYNNSITLKYTLSVPSYTAPKDVYTTARSMGRNMTMNKSFNLTWSFPVDSGFSYLVRMHFCEFEAEIVKVGQRVFNIYLANQSAAKAFDVFRSAGGREIPYFRDYLVFLLNSGGDEKRVNLSVELQSYPDRLTTDYYDAILNGIEIFKLNDTTGNLAGANPNPLPATTQQPRTESNKSKSKSPVVIGSVVGGFGFLAVVGFLLLGFFIFRRRVGSSEKHKGSSTDGTTTLWGLFSYSTTKSTKTRGSSSLPSDLCRYFSLAEIKAATNDFDGVLIVGAGGFGDVYKGYVNMDGVTIRIAIKRLKPGSEQGANEFKTEIKMLSQLRHLHLVSLIGYCNEGEEMILVYDYMARGTLRDHLYGKENPSLPWIQRLEICIGAARGLHYLHTGAKHTIIHRDMKTTNILLDEKWVAKVSDFGLSRVGPTDTSKSHVSTVVKGSFGYLDPEYYRRHQLTEKSDVYSFGVVLCEVLCARPPVIRTMDKEQVSLPTWVQRCYARNMLEQIVDRTMKDQVGLKCLGKFVETAVSCIRDNGTERPSMNDVVWGLEFALQLQQSTTTAGENGTKCGVHNDEKEEEKEAMPVSTEMNVSREEIYSSSPDVGVGADSKRQWSINCNVK 872
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1773508 1778604 - Conep11aG0037200.1 Cone11ag0362 447614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0362 872 MobiDBLite consensus disorder prediction 814 860 - -
Cone11ag0362 872 Pfam Protein tyrosine and serine/threonine kinase 533 798 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0362 872 Pfam Malectin-like domain 36 405 IPR024788 -
Cone11ag0362 872 Gene3D Phosphorylase Kinase; domain 1 491 605 - -
Cone11ag0362 872 SMART serkin_6 527 804 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0362 872 FunFam Receptor-like protein kinase FERONIA 606 821 - -
Cone11ag0362 872 FunFam FERONIA receptor-like kinase 33 191 - -
Cone11ag0362 872 PANTHER OS03G0124300 PROTEIN-RELATED 8 467 IPR045272 GO:0004714(InterPro)|GO:0006468(InterPro)
Cone11ag0362 872 CDD STKc_IRAK 533 798 - -
Cone11ag0362 872 SUPERFAMILY Protein kinase-like (PK-like) 502 803 IPR011009 -
Cone11ag0362 872 Gene3D - 215 407 - -
Cone11ag0362 872 Gene3D - 33 191 - -
Cone11ag0362 872 ProSiteProfiles Protein kinase domain profile. 527 804 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0362 872 MobiDBLite consensus disorder prediction 821 836 - -
Cone11ag0362 872 ProSitePatterns Protein kinases ATP-binding region signature. 533 558 IPR017441 GO:0005524(InterPro)
Cone11ag0362 872 Gene3D Transferase(Phosphotransferase) domain 1 606 828 - -
Cone11ag0362 872 FunFam Receptor-like protein kinase FERONIA 499 605 - -
Cone11ag0362 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0362 872 CDD TM_EGFR-like 437 469 - -
Cone11ag0362 872 FunFam FERONIA receptor-like kinase 215 407 - -
Cone11ag0362 872 MobiDBLite consensus disorder prediction 415 437 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0362 Cone-Chr11:1773508 Cone18ag1142 Cone-Chr18:8226328 0 dispersed
Cone11ag0358 Cone-Chr11:1752189 Cone11ag0362 Cone-Chr11:1773508 4.39E-98 proximal
Cone11ag0361 Cone-Chr11:1766270 Cone11ag0362 Cone-Chr11:1773508 1.98E-104 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81878 PF00168 C2 8.40E-22 CL0154 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0362 - - - 0.0