Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone11ag0388 | ATGGAAAACCTTACGGCACATGGCGGCGGCCGACCGGTACTGCCTCCACAATTTCTCTCCGGCAGGCCAGATCTTCACCTCCACCCCCACCACCAATTCAACCCTCACCCCCACCACCACCAAAACCAACAAACCTCCGAAGAGGACGACGAACAAGCCGAGAGCCAAAGCCGGAGCGGTGGAAGCAGCTTAAACCAGCATCACAACAACTCCGACCAGCCCTCTAACGGACCGGACTCATCGAGAAGGTCACCATCTTCAATCAGAAGGCCACGCGGCCGCCCCTCCGGTTCGAAAAACAAACCTAAGCCCCCCATCATAATAACCCGAGACAGTCCCAACGCGCTCCGGTCCCACGTGATGGAAATCGCTAACGAATGTGACGTCATGGAGAGCCTGACAACCTTTGCACGGCGGAGGCAGAGAGGGGTTTGTATTCTAAGCGGGACAGGAACCGTCGCTAATGTTACTCTAAAGCAGCCAGCTTCGCCTGGTGCGGTGGTTACTTTACATGGAAGGTTTGAAATCTTATCGCTTTCCGGTTCATTTCTGCCGCCGCCAGCCCCGCCTGCCGCTTCGGGTTTGACGATATATCTGGCCGGAGGGCAAGGGCAGGTGGTGGGAGGAAGCGTGGTGGGCCAGCTTTTAGCGGCGGGGCCTGTTGTTGTTATGGCGGCTTCTTTTGGTAATGCGGCGTATGAGAGGTTGCCGCTTGAGGATGAAGATATTGTACCAGCAGGGACGGGCGGTGGTCCGGTGCCCGAAAATAGCCCGATCGGAGGACAGCAACAGTTATTGAATGGAGATAGCTCTAACGCGTCGTCTGGTTTGTTTCATGGGATGCCGCAAAATTTACTAAATTCACCTGATCAGGCATTCTGGGCCACACCTCGTCCACCTTACTGA | 906 | 55.74 | MENLTAHGGGRPVLPPQFLSGRPDLHLHPHHQFNPHPHHHQNQQTSEEDDEQAESQSRSGGSSLNQHHNNSDQPSNGPDSSRRSPSSIRRPRGRPSGSKNKPKPPIIITRDSPNALRSHVMEIANECDVMESLTTFARRRQRGVCILSGTGTVANVTLKQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGQLLAAGPVVVMAASFGNAAYERLPLEDEDIVPAGTGGGPVPENSPIGGQQQLLNGDSSNASSGLFHGMPQNLLNSPDQAFWATPRPPY | 301 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1912189 | 1913094 | + | Conep11aG0039900.1 | Cone11ag0388 | 447640 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone11ag0388 | 301 | ProSiteProfiles | PPC domain profile profile. | 113 | 250 | IPR005175 | - | |
Cone11ag0388 | 301 | MobiDBLite | consensus disorder prediction | 257 | 291 | - | - | |
Cone11ag0388 | 301 | PIRSF | ESCAROLA | 24 | 298 | IPR014476 | GO:0003680(InterPro) | |
Cone11ag0388 | 301 | Gene3D | - | 116 | 244 | - | - | |
Cone11ag0388 | 301 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 48 | 300 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0010228(PANTHER) | |
Cone11ag0388 | 301 | FunFam | AT-hook motif nuclear-localized protein | 116 | 243 | - | - | |
Cone11ag0388 | 301 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 113 | 244 | - | - | |
Cone11ag0388 | 301 | MobiDBLite | consensus disorder prediction | 41 | 55 | - | - | |
Cone11ag0388 | 301 | MobiDBLite | consensus disorder prediction | 56 | 84 | - | - | |
Cone11ag0388 | 301 | CDD | DUF296 | 117 | 184 | IPR005175 | - | |
Cone11ag0388 | 301 | MobiDBLite | consensus disorder prediction | 1 | 114 | - | - | |
Cone11ag0388 | 301 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 117 | 228 | IPR005175 | - | |
Cone11ag0388 | 301 | MobiDBLite | consensus disorder prediction | 243 | 301 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag1200 | Cone-Chr10:8859148 | Cone11ag0388 | Cone-Chr11:1912189 | 1.46E-70 | dispersed | |
Cone11ag0388 | Cone-Chr11:1912189 | Cone14ag0309 | Cone-Chr14:1438102 | 2.28E-99 | dispersed | |
Cone11ag0388 | Cone-Chr11:1912189 | Cone14ag0306 | Cone-Chr14:1406920 | 1.35E-18 | wgd | |
Cone11ag0388 | Cone-Chr11:1912189 | Cone15ag0333 | Cone-Chr15:1527904 | 1.24E-17 | wgd | |
Cone11ag0388 | Cone-Chr11:1912189 | Cone18ag1132 | Cone-Chr18:8173667 | 1.60E-168 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone11ag0388 | - | - | - | 0.0 |