Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0413 ATGGATTTAACGTGTAGTTTGAGACTGCCAAATTTGTTAAGTGGAGGTGAACGAACGATGAACCATTTTGTTTCACAGAATGGGTTCTATAGAAGCAGAGTTGGTAATTCTATGTTTCTTGGCAGTTCACGAATTCTTTCTAAAGCTAGTTTGACTAAGAAAATGAAGAGGATAATTGCTTCAAGTGGTTCTAGGAATTCTGGCCTGGTTTGTAATCAAGAGTTTGACAGCCATTTATGGATTGCAAATCCGAGAAGATCTTTAAGCTGTAATTTTGGTAGTTCTTTCAAGATATCAAGGGTGGTTCACTCACAGTGCCAGAGTAATGATTCTTTAGCATTTATTGATGGGAATGGTCGAAATGTAGAACTCATTGATGGTCATGGGGATAGCATGGGAGTGGGACCTATTGATGATTCCCAATCAATAGGTTCTGTCGAAAATGATGGAAAACAAGAAGGAGAGGGAGAACTGGTAGCACCAAGCGTGGAAGAGTTCAAAGAATTGCTGCAAAAGGCCATGAAAGAATTAGAAGTTGCAAGGCTCAACAGTACTGTATTTGAGGAAAAGGCTCAGAAAATATCTGAAGCTGCAATTGCTTTGCGAGATGAAGCAACCAATGCTTGGAACGATGTGAACTCTACCCTTGATGCTATACAACAGATAGTTAATGAAGAAGACTTTGCCAAAGAAGCTGTGCAGAAAGCAACAATGGCTCTTTCATTAGCAGAGGCAAGGCTTCAGGTCGTGGTAGAAAGAGGAGAGGATTCCACAGAAGTTTCAAGAAATGCAGATGGCGAGTATGGTATTAAGGACGAGGAAGATGGCCTGTTAGTTGCTCAGCAGGGCATGAGGGAATGTCAGGAGAACCTGGCAAATTGCGAGGCAGAGCTGATCCGCTTACAGACTAGAAAAGATGAGTTAAAGAAGGAAATGGACAGGTTGAATGATTTTGCTGAAAAAGCACAGCTGAACTCCTTGAAAACTGAGGAGGATGTGACAAACATAATGCTTTTAGCTGAGCAAGCTGTTGCTTTTGAACTTGATGCTGCACAGCGGGTCAATGATGCAGAAATTGCTCTACAGAAAGCAGATAAATCTCTATCTACTTCTTCTATTGACATCGCAGAAACCACACAAAGGCAGGAGTTTACGGATGAGAGTCTTTCTGAGGAGGAGAGACTGGTTCAAGGGGTTTCTAGTGACGTCATATTGGAAAGGGTTGGAGATTTGCCTATAGTCAGTGATTCTTTGGCTGTCAAACCTTTACCAGATAGCTTCTGTGATCTGCAGGATTTGAATCAATCTAATGACTTAGGTGACCATGAGAAAGGAAAATTGAATTCAGACTCTGCTAGAGATGCTGAATTTGAAATAGAAAAGCCAAAGAATGTGAATCAAACAAAAAAGCAGGAAACTCAGAGGGATTTGACTAGAGACAACTCCCCGTTAAATGGTCCTAAGGCATTGCCGAACAAATCTTCTCGCTTCTTTTCTGCATCATTCTTCTCTTTTACTGGTGAGGGGACTGAGCTCACACCAGCATCCGTTGCTCATGGTCTTATGGAGTCTGCTCAGAAGAAATTTCCTAATCTAATCTTTGGGTTATTACTATTCGGAGCAGGGGCCACCTTTTACGCTACTCGAGCTGAAAGGAATTCTCGGCTGTTGCAACAGCCCGATGTTATAACCTCTAGCTTTGAAGAAGTTTCCTCAAATGCGAAGCCTCTTCTTCAAAAATTAAGGAGACTTCCTCAGAGAGTTGAAAAATTAATTGCAATGATTCCTCATCAAGAGGTGAATGAGGAGGAAGCTTCTCTTTTTGACATGTTGTGGCTATTGCTTGCTAGTGTTATATTTGTGCCAATGTTCCAGAAAATTCCCGGAGGCAGTCCTGTTCTTGGGTACTTGGCTGCTGGCATCTTGATTGGGCCGTACGGTCTCTCCATTATTCGTCACGTGCATGGGACAAAAGCAATTGCTGAATTTGGAGTTGTTTTCTTATTGTTCAATATTGGCCTTGAGCTCTCAGTTGAACGGCTGAGTTCCATGAAGAAATATGTTTTTGGGTTAGGCTCTGCTCAGGTTTTGGTTACAGCAGCAGCAGTTGGCTGTATTGCTCATTTTGTCTGTAAGCAGGCTGGTCCTGCCGCAATAGTAATTGGGAATGGCCTGGCTTTATCATCTACTGCTGTAGTGCTACAGGTGTTACAAGAGCGGGGTGAGAGCACATCTCGTCATGGACGTGCTACTTTTTCCGTCCTACTATTCCAGGATTTGGCTGTTGTGGTTTTGTTAATACTCATACCTCTTATTTCACCAAATTCGTCAAAAGGAGGGATTGGTTTTCAAGCTATTGCTGAAGCTCTTGGACTGGCTGCTGTTAAGGCGGCAGTTGCCATCACTGCCATAATTGCTGGTGGGCGCTTGCTGCTTCGACCAATTTATAAGCAGATTGCCGAGAATCAAAATGCAGAGATATTCTCTGCCAATACACTCCTTGTTATTTTGGGGACTAGTCTGCTTACAGCAAGGGCTGGACTGTCCATGGCATTGGGTGCATTTTTAGCTGGTTTACTACTCGCAGAAACAGAGTTTTCCTTGCAGGTTGAATCTGATATAGCTCCCTATCGTGGCCTTTTGTTAGGGCTTTTTTTCATGACGGTTGGAATGTCCATCGATCCGAAACTTCTTCTTTCAAACTTTCCAGTCATTATGGGGTCACTAGGAGTCCTAATTGTTGGCAAGACCTTATTGGTTGTTTTAGTTGGCAAGCTTTTTGGCATCTCAATTATATCTGCAATACGAGTTGGTCTGCTTCTTGCTCCAGGTGGAGAGTTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGTATAATGTCTTCTCAACTGTCATCTTTGCTGTTTCTTGTGGTGGGAATTTCTATGGCCCTCACACCATATCTAGCCGCTGGAGGCCAGTTGATTGCTTCTCGGTTTGAGCTGCATGATGTTCGGAGTTTGCTACCTGTTGAGAGTGAGACAGATGATTTGCAAGGTCATATAATTATTTGCGGATTTGGACGAGTTGGCCAGATAATTGCCCAACTTCTTTCAGAACGACTAATACCTTTTGTTGCTCTTGACGTGAGAAGTGATAGAGTGGCAGTTGGACGTGCCTTGGACCTTCCTGTGTATTTTGGTGATGCGGGAAGTAGAGAGGTCCTTCATAAAGTGGGTGCTGATAGAGCATGTGCTGCAGCAGTAACTCTGGATTCTCCTGGTGCAAATTATCGAACTGTTTGGGCTTTGAGAGAGCATTTCCCGCAAGTGAAGACATTTGTTCGTGCTCATGACGTTGATCATGGCATTAATCTGGAAAAAGCTGGGGCTACAGCGGTAATTCTGATCTCCGATTATTTCCATATGGGATGA 3417 43.14 MDLTCSLRLPNLLSGGERTMNHFVSQNGFYRSRVGNSMFLGSSRILSKASLTKKMKRIIASSGSRNSGLVCNQEFDSHLWIANPRRSLSCNFGSSFKISRVVHSQCQSNDSLAFIDGNGRNVELIDGHGDSMGVGPIDDSQSIGSVENDGKQEGEGELVAPSVEEFKELLQKAMKELEVARLNSTVFEEKAQKISEAAIALRDEATNAWNDVNSTLDAIQQIVNEEDFAKEAVQKATMALSLAEARLQVVVERGEDSTEVSRNADGEYGIKDEEDGLLVAQQGMRECQENLANCEAELIRLQTRKDELKKEMDRLNDFAEKAQLNSLKTEEDVTNIMLLAEQAVAFELDAAQRVNDAEIALQKADKSLSTSSIDIAETTQRQEFTDESLSEEERLVQGVSSDVILERVGDLPIVSDSLAVKPLPDSFCDLQDLNQSNDLGDHEKGKLNSDSARDAEFEIEKPKNVNQTKKQETQRDLTRDNSPLNGPKALPNKSSRFFSASFFSFTGEGTELTPASVAHGLMESAQKKFPNLIFGLLLFGAGATFYATRAERNSRLLQQPDVITSSFEEVSSNAKPLLQKLRRLPQRVEKLIAMIPHQEVNEEEASLFDMLWLLLASVIFVPMFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAAAVGCIAHFVCKQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGIGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPVIMGSLGVLIVGKTLLVVLVGKLFGISIISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPYLAAGGQLIASRFELHDVRSLLPVESETDDLQGHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKVGADRACAAAVTLDSPGANYRTVWALREHFPQVKTFVRAHDVDHGINLEKAGATAVILISDYFHMG 1138
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2044628 2052721 - Conep11aG0042500.1 Cone11ag0413 447665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0413 1138 Gene3D - 1013 1136 - -
Cone11ag0413 1138 MobiDBLite consensus disorder prediction 434 490 - -
Cone11ag0413 1138 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 614 894 IPR004771 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)
Cone11ag0413 1138 Coils Coil 163 183 - -
Cone11ag0413 1138 Coils Coil 284 325 - -
Cone11ag0413 1138 MobiDBLite consensus disorder prediction 436 477 - -
Cone11ag0413 1138 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1012 1131 IPR036291 -
Cone11ag0413 1138 Pfam TrkA-N domain 1016 1129 IPR003148 GO:0006813(InterPro)
Cone11ag0413 1138 FunFam K(+) efflux antiporter 2 chloroplastic 603 989 - -
Cone11ag0413 1138 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 321 1130 - GO:0009507(PANTHER)|GO:0015386(PANTHER)|GO:0016020(PANTHER)
Cone11ag0413 1138 Gene3D - 603 989 IPR038770 -
Cone11ag0413 1138 Pfam Sodium/hydrogen exchanger family 617 983 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cone11ag0413 1138 ProSiteProfiles RCK N-terminal domain profile. 1015 1138 IPR003148 GO:0006813(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0413 Cone-Chr11:2044628 Cone12ag1015 Cone-Chr12:8556218 7.04E-95 dispersed
Cone11ag0413 Cone-Chr11:2044628 Cone18ag1094 Cone-Chr18:8008730 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0413 K03455 - mdm:103406153 1498.03