Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0438 ATGGCTGGACGTAGGTTTTCCTCTCTGATTTCACTCTTAAATTCAAGTAAATCCTCTTTGAGATCGCACTCGTTTCAATCTTACAACGCCAATTCGAAGTTGTTCGATTATAAGGATCGAGCTCATGCAAGATTGTCATACGCTTTTGTAGATCACAATTACCAAACAAGTCAAGGTCAGAAGTTCCAAAATAATGCCAGTTATCATTTTCAAATGAGTGCTTTTCAATCTCTTAGTGACTGTCACTGTCAAAAAACCAAACCAGTTTCTGCATTTTCACACAAGTCATCTAATTCCCTGTTTAGAAGCCCCTTTTCAAACAGTAGATCCTATTCCTTTTCATCCACTAATAAAGATGAGAAATCTGGAGATGTTGGAATTGTATCTGGTTCTACTGATGGTGGAGTGGATGTGAGTAACAATGCCGATTTGGGAAGTGATTGGATTGAAAAAGCTAAGGTTGCCTGGCAGAGTGCTGTAGATGCAGCATCTTTTACAGGGGAAAAGGCGAAAGAAGTATCAGATCAAATGTTTCCTCATGTAGAACAGTTGCTCAATACTCATCCCTATCTCAAAAATGTGATTGTCCCTATGGGTTCTACAGTGATAGCCACAATGCTGGCTTGGTTAGTGATGCCTAAAATTTTGAGGAGAATTCATAGGTATGCAATGCAAGGCTCAGCTAGTCTACTCCCTGGAAGTGTATATGTGGAACAAGTGCCTTATGAGAAAAGCTTTTGGGGTGCCTTAGAGGATCCTCTACGATATCTTGTTACTTTCATTGCATTTACAGAAATTGGCAGGATGGTAGCACCAACCACTGTAGCATCACAGTACATCACTCAGGTGTGGAGGGGAGCAGTGGTCGTTAGCTTCGTTTGGTTTCTGTATAGGTGGAAGACAAATGTGTTCACTCATGCATTGGCTAGACATAGTCTTTCGAGGCTTGACCGCGAAAGATTTCTAACTCTGGACAGAGTTTCATCTGTTGGGTTATTTGCTATTGGGTTCATGGCTTTAGCCGAGGCATGTGGTGTGGCTGTTCACTCTCTACTGACTGTTGGGGGCATTGGAGGAGTGGCCACTGCTTTTGCTGCAAGAGACATCCTTGGGAATGTTCTTAGTGGGTTGGCCATGCAATTCTCCAAGCCCTTTTCACTTGGAGATACAATAAAGGCTGGATCTGTAGAAGGTCAGGTGGTGGAAATGGGACTAACAACAACATCATTACTGAACGCCGAGAAGTTTCCTGTCATAGTTCCTAATTCACTATTTTCGAGCCAGGTAATTGTGAACAAATCACGTGCTGAATGGCGTGCCATGACTACTAAAATTCCTTTGCAAATTGAGGATGTTAGTCGGTTTACTCAGATAACTGAAGATATAAAAAGCATGCTTAGATCTCATCCTAAAGTTTTCTTGGGCAAGGAGGTTCCTTATTGCTTTCTCTCTCGAATAGAAAGTTCGCACGCGGAACTTACGCTTGGTTGCAACCTCAAACAAATGAGCAAAGATGAGTTATACTCCACAGAGCAAGATATTCTACTGCAATCGGTCGATATAATCAAGAAACACGGTGCAGCCTTGGGAAGCACCTGGAATGACGGACCAAGTCGCTGA 1620 42.41 MAGRRFSSLISLLNSSKSSLRSHSFQSYNANSKLFDYKDRAHARLSYAFVDHNYQTSQGQKFQNNASYHFQMSAFQSLSDCHCQKTKPVSAFSHKSSNSLFRSPFSNSRSYSFSSTNKDEKSGDVGIVSGSTDGGVDVSNNADLGSDWIEKAKVAWQSAVDAASFTGEKAKEVSDQMFPHVEQLLNTHPYLKNVIVPMGSTVIATMLAWLVMPKILRRIHRYAMQGSASLLPGSVYVEQVPYEKSFWGALEDPLRYLVTFIAFTEIGRMVAPTTVASQYITQVWRGAVVVSFVWFLYRWKTNVFTHALARHSLSRLDRERFLTLDRVSSVGLFAIGFMALAEACGVAVHSLLTVGGIGGVATAFAARDILGNVLSGLAMQFSKPFSLGDTIKAGSVEGQVVEMGLTTTSLLNAEKFPVIVPNSLFSSQVIVNKSRAEWRAMTTKIPLQIEDVSRFTQITEDIKSMLRSHPKVFLGKEVPYCFLSRIESSHAELTLGCNLKQMSKDELYSTEQDILLQSVDIIKKHGAALGSTWNDGPSR 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2201332 2204710 + Conep11aG0045000.1 Cone11ag0438 447690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0438 539 SUPERFAMILY Sm-like ribonucleoproteins 368 433 IPR010920 -
Cone11ag0438 539 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 148 532 - -
Cone11ag0438 539 Pfam Mechanosensitive ion channel, beta-domain 368 435 IPR006685 GO:0016020(InterPro)|GO:0055085(InterPro)
Cone11ag0438 539 Gene3D - 384 432 IPR023408 -
Cone11ag0438 539 MobiDBLite consensus disorder prediction 95 124 - -
Cone11ag0438 539 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 280 367 IPR011014 GO:0016020(InterPro)
Cone11ag0438 539 Gene3D - 279 383 - -
Cone11ag0438 539 MobiDBLite consensus disorder prediction 95 122 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0438 K22047 - mdm:139197397 651.744