Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone11ag0475 | ATGGGTACTACAGAAGATAAGCCGATACAAGAGTTTGATCAGGAACAGAATCATGGTAGTCCAGATGCTGAGGTTCATAGCAAGCAATCTGGTTATGAAATGCTGAAGAATAGTGTCGTCTTTAGGAGCATAAAGGTTGTAATTTTCTCTAGTAAACTCAACTTTATCATGCCTTTTGGTCCTCTGGCACTTCTTGTCGCCAAACTTACGGGTCACCACGGTTGGGTCTTCTTTCTAAGCTTCTTGGGTATAACACCTCTTGCTGAGCGTTTAGGTTATGCCACAGAGCAGCTGACCTTTTACACAGGTCCTACAGTTGGGGGTCTGTTAAATGCTACTTTTGGGAATGCAACGGAACTGATTATATCGATCTATGCACTGAATAGCGGGATGGTCCGCGTTATTCAGCTATCGCTACTTGGCTCGATACTGTCAAATATGTTGCTTGTTCTTGGATGTGCACTTTTCTGTGGCGGCATTGTTTTTTACAGCAAGGAACAGGTGTTCTGCAAGGCAACGGCTTCTGTGAACTCGGGATTGCTTTTAATGGCGGTCATGGGCCTGTCATTCCCTGCCGTTCTCCACTATACTCACAGTGAGGTGCACTTTGGGAGATCAGAGTTGGCTCTTTCCCGATTTAGCAGTTGCATTATGCTTCTGGCCTATGTTGCCTATCTTTTCTACCAATTTAAGAGTCAGACAAATCTGTATGCTCCATTTACTTTTAGTGAGGAAGGGAATGAGAGTGGAGAAATCTCAGAAGATGATGAATATGAAGAGCCAGAGATGTCAATGTGGGAGTCAATTATTTGGCTTTTTATTATGACTGCATGGATTTCTATTCTATCAGAGTACTTAGTTGATGCCATGAAGGGAGCATCCACTTCGTTGAGAATTCCGGTTTCGTTTATCAGCGTTATATTACTCCCGATCGTCGGGAATGCTGCTGAGCATGCAAGTGCTCTCATGTTTGCCATGAAAGACAAGCTTGATATTTCTTTGGGTGTCGTGATCGGATCATCAGTGCAAATATCTATGTTTCTGATTCCTTTCTGTGTGGTTATCGGTTGGATTATGGGGCAGCCTATGGACTTAAACTTTCAACTGTTCGAAACGGCAACGCTATTTGTAACCGTGATAGTTGTTGCCTTCTTCCTGCAGGAAGGAACTTCGAATTATTTCAAAGGCCTTATGCTTATCCTCTGCTATGTGATTGTTGCTGCCGGTTTTTTCGTACATGTCGATCCTCCCTCGCAAGATGACAGGCAAGTAGGAGAAAAGAGGACATTATAG | 1293 | 43.46 | MGTTEDKPIQEFDQEQNHGSPDAEVHSKQSGYEMLKNSVVFRSIKVVIFSSKLNFIMPFGPLALLVAKLTGHHGWVFFLSFLGITPLAERLGYATEQLTFYTGPTVGGLLNATFGNATELIISIYALNSGMVRVIQLSLLGSILSNMLLVLGCALFCGGIVFYSKEQVFCKATASVNSGLLLMAVMGLSFPAVLHYTHSEVHFGRSELALSRFSSCIMLLAYVAYLFYQFKSQTNLYAPFTFSEEGNESGEISEDDEYEEPEMSMWESIIWLFIMTAWISILSEYLVDAMKGASTSLRIPVSFISVILLPIVGNAAEHASALMFAMKDKLDISLGVVIGSSVQISMFLIPFCVVIGWIMGQPMDLNFQLFETATLFVTVIVVAFFLQEGTSNYFKGLMLILCYVIVAAGFFVHVDPPSQDDRQVGEKRTL | 430 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2399847 | 2402051 | - | Conep11aG0048700.1 | Cone11ag0475 | 447727 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone11ag0475 | 430 | FunFam | Vacuolar cation/proton exchanger | 104 | 243 | - | - | |
Cone11ag0475 | 430 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cone11ag0475 | 430 | Pfam | Sodium/calcium exchanger protein | 268 | 411 | IPR004837 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone11ag0475 | 430 | Pfam | Sodium/calcium exchanger protein | 74 | 230 | IPR004837 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone11ag0475 | 430 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Cone11ag0475 | 430 | Gene3D | - | 104 | 255 | IPR044880 | - | |
Cone11ag0475 | 430 | Gene3D | - | 256 | 410 | IPR044880 | - | |
Cone11ag0475 | 430 | PANTHER | VACUOLAR CALCIUM ION TRANSPORTER | 22 | 416 | IPR004713 | GO:0006812(InterPro)|GO:0006874(PANTHER)|GO:0008324(InterPro)|GO:0009705(PANTHER)|GO:0015369(PANTHER)|GO:0016020(InterPro)|GO:0070588(PANTHER) | |
Cone11ag0475 | 430 | FunFam | Vacuolar cation/proton exchanger | 255 | 412 | - | - | |
Cone11ag0475 | 430 | NCBIfam | calcium/proton exchanger | 59 | 411 | IPR004798 | GO:0006816(InterPro)|GO:0015369(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0475 | Cone-Chr11:2399847 | Cone8ag1353 | Cone-Chr8:10849714 | 1.03E-195 | dispersed | |
Cone11ag0475 | Cone-Chr11:2399847 | Cone17ag0026 | Cone-Chr17:185953 | 2.40E-192 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone11ag0475 | K07300 | - | cit:102629460 | 614.764 |