Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0497 ATGGTCCAGCCACCACCAAACACTGGTACTACTGAGAATGACTGGAGCTCCACCACCATCACCACCCCCACAACCACCGACATCTCAACCACCCAGAACGGCGTCAGCCACCACCCGACTTACCACGGCGTCCGCAAGCGGCGATGGGGCAAATGGGTGTCGGAAATTCGAGAACCGCGCAAAAAATCACGCATTTGGTTGGGTTCATTTCCGGCCCCTGAAATGGCAGCCAAGGCCCATGACGTGGCAGCCTACTGCTTGAAAGGACGTAAGGCCCAGCTCAATTTTCCAGAGGAAGTCGATGATTTGCCCCGTCCGGCGTCGTTTGCAGCTAAGGATATTCAAGAGGCGGCAGCTAAGGCAGCAGCTCAGACGATGGTGTCAGCTAGGAAAAACAACGTGTCGGACGAGGAAGTTGAGTGTGGAAAGAGCAATGATTTTTGGGGTGAGATCGAGTTGCCGGAATTGAGAAGTAAAGGGCATTGTTACAGCTTTTGGAATTCGTACGGCTGGGTTTTTCCAAACTGCGATGACACGTCGCATGAGTATCAGGAAGAGACAAGGCAGACCATGCCTGTGAACAACACATCGTTTTTTATTTGA 603 52.4 MVQPPPNTGTTENDWSSTTITTPTTTDISTTQNGVSHHPTYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPAPEMAAKAHDVAAYCLKGRKAQLNFPEEVDDLPRPASFAAKDIQEAAAKAAAQTMVSARKNNVSDEEVECGKSNDFWGEIELPELRSKGHCYSFWNSYGWVFPNCDDTSHEYQEETRQTMPVNNTSFFI 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2554738 2555388 + Conep11aG0051100.1 Cone11ag0497 447749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0497 200 SUPERFAMILY DNA-binding domain 40 98 IPR016177 GO:0003677(InterPro)
Cone11ag0497 200 MobiDBLite consensus disorder prediction 1 42 - -
Cone11ag0497 200 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 26 136 IPR051032 -
Cone11ag0497 200 MobiDBLite consensus disorder prediction 1 38 - -
Cone11ag0497 200 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone11ag0497 200 FunFam Ethylene-responsive transcription factor 2 40 98 - -
Cone11ag0497 200 Pfam AP2 domain 40 89 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone11ag0497 200 SMART rav1_2 40 103 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone11ag0497 200 PRINTS Ethylene responsive element binding protein signature 79 99 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone11ag0497 200 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone11ag0497 200 CDD AP2 41 98 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone11ag0497 200 Gene3D AP2/ERF domain 40 99 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0497 Cone-Chr11:2554738 Cone20ag0599 Cone-Chr20:3503235 3.25E-38 dispersed
Cone11ag0497 Cone-Chr11:2554738 Cone18ag1009 Cone-Chr18:7471657 1.58E-120 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44316 PF00067 p450 4.00E-78 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0497 K09286 - mdm:103417636 189.119