Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone11ag0515 | ATGACTGCTGCTACTTCCAACGTAGAAAGCCTCTGGATTTTCGTCCTAGCCTCTAAATTTGAAAACATAACTCGAGAAAACATCCTACTCTCAGTCTTAATCGTCACCATGACGTGGCTAGCCATGAATCTCATCTTCTGGGCTCACACAGGAGGCCCAGCATGGGGCAGGAGCTGGTGGGCCAACAAATGTCCGAATAATAATTCAATCCCAGGCCCAAGAGGCTTCCCCCTAATCGGAAGCATGAACCTTATGGTCAACTTAGCCCACCGACGTATTGCCGCCATGGCTCAATCCCTCAACGCCACCCGTCTTATGGCCTTCAGCCTCGGAACCACTCGCGTCATTGTGACTTGTAATCCTGACGTGGCGAAAGAGATTCTCAACAGCTCGGTTTTCGCTGACCGGCCGATCAAGGAGTCTGCTTATGGCTTGATGTTCAACCGTGCGATCGGGTTCGCATCGTACGGTGTTTATTGGCGGACTATGAGGAGAATTTCGTCAAATCATCTCTTCTGTCCGAAACAGATTACCGCTTCGGAGTATTCGAGGAGATTAATTGTGTCGGAAATGGTTGGAATGTTTAAAAAAGAAGAGGATTGCTTCTCTGTTCGGAGTGTACTAAAACGGGCTTCTCTGAACCACATGATGAGCTCTGTTTTCGGAAAATCTTATCCGTTGGATTCGAATACTAATTGCGAGGTTGACAAATTAAGAGAGCTTGTCGATGAAGGGTACGATCTCTTGGGTTTGTTAAACTGGTCGGACCATTTTCCGGCTTTGGCTAATTTCGATATTCAAAGAATCCGGCTCAGATGCTCCAAACTTGTACCCAAAGTGAACCGGTTCGTGGGCCGAGTTATCGCTGAACACCGAGCGGTTCAAACTGGACCGGAGGGGCCGAAAGATTTCGTTAATGTGTTGCTCTCGCTACAAGGAGAGAATAAACAATCTGATTCTGATATAATCGCTGTTCTTTGGGAAATGATATTCAGGGGAACTGATACAGTGGCGGTTTTGATCGAGTGGGTCCTAGCGAGGATGGTGCTTCATCCTGATGTCCAATCAACGGTGCAGGATGAGTTAGATAAGGTTGTGGGAAGATCACGCGCCGTGACTGAAACCGATCTTCCGTCTCTGTGCTATTTAACGGCTGTGATTAAGGAGGTTTTGAGGCTACACCCGCCGGGCCCACTTCTATCATGGGCCCGTTTGGCTATCACTGATACGATTGTTGATGGGTATCATGTGCCCAAGGGGACCACAGCGATGGTGAATATGTGGTCTATTGCGAGGGACACACGTGTTTGGGCGGACCCATTGGAATTTAGGCCCGATAGGTTTGAAGCCCAAGAATATGGACACATGGAGTTTTCGATTATGGGCTCTGATCTAAGACTTGCCCCATTCGGGTCGGGTCGAAGGATTTGTCCAGGAAAGAATCTGGGGTTGATAACGGTTAGCTTCTGGGTGGCCTCGCTTTTACATGAGTTTAAATGGCTACCATCGGATGAGAATGCCGTTGACTTATCTGAAGTTTTAAAGTTGTCGTGTGAAATGGCCAACCCTTTGACCGTAAAAGTACGTGCCAGGCACAGTTAA | 1602 | 48.0 | MTAATSNVESLWIFVLASKFENITRENILLSVLIVTMTWLAMNLIFWAHTGGPAWGRSWWANKCPNNNSIPGPRGFPLIGSMNLMVNLAHRRIAAMAQSLNATRLMAFSLGTTRVIVTCNPDVAKEILNSSVFADRPIKESAYGLMFNRAIGFASYGVYWRTMRRISSNHLFCPKQITASEYSRRLIVSEMVGMFKKEEDCFSVRSVLKRASLNHMMSSVFGKSYPLDSNTNCEVDKLRELVDEGYDLLGLLNWSDHFPALANFDIQRIRLRCSKLVPKVNRFVGRVIAEHRAVQTGPEGPKDFVNVLLSLQGENKQSDSDIIAVLWEMIFRGTDTVAVLIEWVLARMVLHPDVQSTVQDELDKVVGRSRAVTETDLPSLCYLTAVIKEVLRLHPPGPLLSWARLAITDTIVDGYHVPKGTTAMVNMWSIARDTRVWADPLEFRPDRFEAQEYGHMEFSIMGSDLRLAPFGSGRRICPGKNLGLITVSFWVASLLHEFKWLPSDENAVDLSEVLKLSCEMANPLTVKVRARHS | 533 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 2677425 | 2679208 | - | Conep11aG0053000.1 | Cone11ag0515 | 447767 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone11ag0515 | 533 | SUPERFAMILY | Cytochrome P450 | 70 | 531 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag0515 | 533 | Gene3D | Cytochrome P450 | 59 | 532 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag0515 | 533 | CDD | CYP78 | 101 | 524 | - | - | |
| Cone11ag0515 | 533 | PRINTS | E-class P450 group I signature | 211 | 229 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag0515 | 533 | PRINTS | E-class P450 group I signature | 426 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag0515 | 533 | PRINTS | E-class P450 group I signature | 341 | 367 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag0515 | 533 | PRINTS | E-class P450 group I signature | 467 | 477 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag0515 | 533 | PRINTS | E-class P450 group I signature | 321 | 338 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag0515 | 533 | PRINTS | E-class P450 group I signature | 384 | 402 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag0515 | 533 | PRINTS | E-class P450 group I signature | 477 | 500 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag0515 | 533 | FunFam | Cytochrome P450 78A5 | 62 | 531 | - | - | |
| Cone11ag0515 | 533 | PRINTS | P450 superfamily signature | 385 | 396 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag0515 | 533 | PRINTS | P450 superfamily signature | 468 | 477 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag0515 | 533 | PRINTS | P450 superfamily signature | 332 | 349 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag0515 | 533 | PRINTS | P450 superfamily signature | 477 | 488 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag0515 | 533 | PANTHER | CYTOCHROME P450 78A7-RELATED | 1 | 528 | IPR051996 | - | |
| Cone11ag0515 | 533 | Pfam | Cytochrome P450 | 71 | 509 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag0515 | 533 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 470 | 479 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone11ag0515 | Cone-Chr11:2677425 | Cone6ag0519 | Cone-Chr6:2591809 | 1.40E-173 | dispersed | |
| Cone11ag0515 | Cone-Chr11:2677425 | Cone14ag0450 | Cone-Chr14:2111433 | 8.00E-275 | wgd | |
| Cone11ag0515 | Cone-Chr11:2677425 | Cone15ag0480 | Cone-Chr15:2267032 | 5.62E-264 | wgd | |
| Cone11ag0515 | Cone-Chr11:2677425 | Cone18ag0995 | Cone-Chr18:7308166 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone11ag0515 | K20619 | - | cit:102613914 | 738.028 |