Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone11ag0527 | ATGAAATCAGGAGAAAGATCAGGATTACTTCATGATAATAACAATGATCATGAGCTACAATTACAATCTTTCTCGAATATTGCAACACAAGCAATTCACGAACTGACCGGTTCTGTTCAATTTGAAGATATTAATCCGGTTTTGAGCTTCTTTTCATCCAACAATGGAGCCGGAAACAGTACCACCGATCATTGCAGCGACGTCGCAATCAGTAAACCATCTTGGGATTCTAATGAGCAGGTGGGAAGATTGGATCCGAAGGGTGTTGATGATGAGAAGTGCAATGGGAATATTAGTGATGGAAATAATTCATGGAGGAGATCTAGCTCAAGTACTATTAGTTCAGAAAAGAGCAATAAGGTGAAAGTGAGGAGGAAGCTGAGAGCGCCAAGGTTTTGCTTTCAGACAAGAAGTGATGTTGATGTGCTTGATGATGGTTACAAATGGAGGAAATATGGCCAAAAAGTTGTCAAGAACAGCCTTCATCCTAGATATTCTTCAACTCATGATTTTGATCATTTAGATGTATACATGTATACTGCACGTAGGAGTTACTATCGTTGTACACAAAGCAACTGTCGAGTGAAGAAGAGGATTGAAAGATTGTCTGAAGATTGTCGAATGGTGCTAACAACATATGAAGGAAGACATAACCATTCTCCTTTTGAGGACTCAAATTCATCCGAGCCTGATTGCATTTCCTCCTTCTGA | 711 | 39.52 | MKSGERSGLLHDNNNDHELQLQSFSNIATQAIHELTGSVQFEDINPVLSFFSSNNGAGNSTTDHCSDVAISKPSWDSNEQVGRLDPKGVDDEKCNGNISDGNNSWRRSSSSTISSEKSNKVKVRRKLRAPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRYSSTHDFDHLDVYMYTARRSYYRCTQSNCRVKKRIERLSEDCRMVLTTYEGRHNHSPFEDSNSSEPDCISSF | 236 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2860831 | 2862868 | - | Conep11aG0054300.1 | Cone11ag0527 | 447779 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone11ag0527 | 236 | MobiDBLite | consensus disorder prediction | 71 | 118 | - | - | |
Cone11ag0527 | 236 | Gene3D | WRKY domain | 128 | 221 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone11ag0527 | 236 | Pfam | WRKY DNA -binding domain | 144 | 165 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone11ag0527 | 236 | Pfam | WRKY DNA -binding domain | 181 | 219 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone11ag0527 | 236 | ProSiteProfiles | WRKY domain profile. | 138 | 222 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone11ag0527 | 236 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 83 | 224 | IPR044810 | GO:0003700(InterPro) | |
Cone11ag0527 | 236 | MobiDBLite | consensus disorder prediction | 96 | 117 | - | - | |
Cone11ag0527 | 236 | SUPERFAMILY | WRKY DNA-binding domain | 135 | 220 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone11ag0527 | 236 | SMART | WRKY_cls | 143 | 221 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0527 | Cone-Chr11:2860831 | Cone9ag1265 | Cone-Chr9:9395529 | 8.55E-43 | dispersed | |
Cone11ag0527 | Cone-Chr11:2860831 | Cone14ag0482 | Cone-Chr14:2345784 | 1.14E-37 | wgd | |
Cone11ag0527 | Cone-Chr11:2860831 | Cone15ag0511 | Cone-Chr15:2482764 | 4.20E-69 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44321 | PF00076 | RRM_1 | 6.10E-13 | CL0221 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone11ag0527 | - | - | - | 0.0 |