Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone11ag0593 | ATGGAAAGGGAGAGATTCTTAACAAATAATATGAACTGGAACTACTCAAATTTCGGGGTGGAAATCCAGTCGAATGATTTAAACAACAATAATTCCTGCATTTTCAATCCGAATTGGGATAATTCAATGGATCAGAGCGATCCCTTTGAATCCGCCTTAAGCTCCATCGTCTCTTCTCCAGCTGCCTCTAATGGTGGCGGCGGACCCACCACTACCACAGCCATCACCTCCACCACACCCATCACCGGAGACAACATAATGATCAGAGAACTCATCGGAAGACTAGGAAGCATTTGCAATTCCGGTGAGATTTCCCCTCAACCTTACATTCCAGGAAATAATAGCACTAACACTTCATGCTATAACACTCCGTTAAATTCACCACCTAAGCTCAACCTATCGATGATGGATCCACAAATGAGACCAAGCCTTCCACTTTCTGGGACCCACTTGGCCCCTTTTCCGGCCGATCCTGGTTTCGCAGAGAGAGCGGCGAGATTTTCCTGTTTTGGGACAAGAAATGTTGGACAGTTTGGTCTGGTTGAAACTGAGTTGGGTTGTTATAACAACAGATCAATGCCTAAATCTGAATCGGGCAAGCTGTCTAGGGTTTCTAGTAATCAGTCGTTTAGATTTGCTAACGGGACTGGATCTCAAATGGGCAATTCAGAAAGCAATGCAAAGGGAGAGGAAAATGGAGTAGAATTGAATGATTCAAGGGAAGGTTCCTCTGTTTCTGAGCAGGTCACTTTTGGTGAATTGAATATCAAAACTGAACCTGTTCCTCCTGCTGCTGCTTGTAATAACAGGAAGAGGAAGACTATTACAAAGGGGAAGAAGGGTAAAGAAGCTGCAACAAATCCTAAAGATGTTAAGGCAGGGGTGGAGAGCGATGAATTGAAAGCGAAGAGGAGCAAACATGAGGAGGCAAATGGGACTGGAAAGGGTAGTGAAAAGGGCGAGGAGTGTTGTGACGGTGAGAATAAAAATGGAGGGGAAGGGAATAACAATCAGAAGACTTGTAATAATAAGGATAATTTGAAGCCGCCAGAGCCTCCTAAAGATTATATTCATGTTCGGGCCAGAAGAGGTCAGGCGACAGATAGCCATAGCTTGGCTGAAAGAGTTCGAAGAGAGAAGATTAGTGAAAGGATGAAGTTTCTTCAAGATCTTGTTCCTGGTTGCAATAAGGTAATTGGGAAGGCAGTGATGCTTGATGAAATTATAAACTATGTGCAGTCATTACAGCGCCAAGTTGAGTTTCTATCAATGAAACTGGCTACTGTTAATCCAAGGATGGATTTTAACATGGAGGCTCTTCTTCCCAAAGAGGTCTTTCAACCTCGTGGATCTTTACCGCAAACTATTTACCCTTTAGATTCGTCTATCCCCGGATTTTCAAACTACCCGGCCCTCCAATTGCCTTCTCCACAACTACACAATAATGGAACTTCTACTGGAAATGAGAATCAATTCCCCGGAAATCCGGCAATGAGCGATACTCTAAGACAGAACTTGAGTATGCACGGCCCTCCTGCCATTGATGGATTTTCTGAAGCTGTGCCTCCGCAAGTTTCATCCTTCTGGGAAGATGATCTTCAAAGTGTAGTTCAGATGGGTTATGGACCCAATTAG | 1635 | 43.98 | MERERFLTNNMNWNYSNFGVEIQSNDLNNNNSCIFNPNWDNSMDQSDPFESALSSIVSSPAASNGGGGPTTTTAITSTTPITGDNIMIRELIGRLGSICNSGEISPQPYIPGNNSTNTSCYNTPLNSPPKLNLSMMDPQMRPSLPLSGTHLAPFPADPGFAERAARFSCFGTRNVGQFGLVETELGCYNNRSMPKSESGKLSRVSSNQSFRFANGTGSQMGNSESNAKGEENGVELNDSREGSSVSEQVTFGELNIKTEPVPPAAACNNRKRKTITKGKKGKEAATNPKDVKAGVESDELKAKRSKHEEANGTGKGSEKGEECCDGENKNGGEGNNNQKTCNNKDNLKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVIGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNMEALLPKEVFQPRGSLPQTIYPLDSSIPGFSNYPALQLPSPQLHNNGTSTGNENQFPGNPAMSDTLRQNLSMHGPPAIDGFSEAVPPQVSSFWEDDLQSVVQMGYGPN | 544 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3602668 | 3605719 | + | Conep11aG0060900.1 | Cone11ag0593 | 447845 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone11ag0593 | 544 | SMART | finulus | 371 | 421 | IPR011598 | GO:0046983(InterPro) | |
Cone11ag0593 | 544 | MobiDBLite | consensus disorder prediction | 238 | 253 | - | - | |
Cone11ag0593 | 544 | FunFam | Basic helix-loop-helix transcription factor | 362 | 435 | - | - | |
Cone11ag0593 | 544 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 365 | 415 | IPR011598 | GO:0046983(InterPro) | |
Cone11ag0593 | 544 | Gene3D | - | 362 | 435 | IPR036638 | GO:0046983(InterPro) | |
Cone11ag0593 | 544 | MobiDBLite | consensus disorder prediction | 330 | 345 | - | - | |
Cone11ag0593 | 544 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 152 | 493 | IPR024097 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro) | |
Cone11ag0593 | 544 | Pfam | Helix-loop-helix DNA-binding domain | 369 | 416 | IPR011598 | GO:0046983(InterPro) | |
Cone11ag0593 | 544 | MobiDBLite | consensus disorder prediction | 57 | 78 | - | - | |
Cone11ag0593 | 544 | CDD | bHLH_AtBPE_like | 355 | 440 | - | - | |
Cone11ag0593 | 544 | MobiDBLite | consensus disorder prediction | 279 | 328 | - | - | |
Cone11ag0593 | 544 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 363 | 435 | IPR036638 | GO:0046983(InterPro) | |
Cone11ag0593 | 544 | MobiDBLite | consensus disorder prediction | 211 | 355 | - | - | |
Cone11ag0593 | 544 | MobiDBLite | consensus disorder prediction | 211 | 230 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0593 | Cone-Chr11:3602668 | Cone17ag0663 | Cone-Chr17:4075955 | 1.13E-68 | dispersed | |
Cone11ag0593 | Cone-Chr11:3602668 | Cone18ag0913 | Cone-Chr18:6505353 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44329 | PF05633 | BPS1 | 2.50E-05 | CL0133 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone11ag0593 | - | - | - | 0.0 |