Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0622 ATGGCACCACCGTTACAACCACCACAATCTTCAACTCCATCCTTTCTTAAAAAGCCCCTCCTCAAGTTGTTCTTCACCACCATTCTCTGTTCCGTCTCCTATTTTCTTGGAATCGACATCAACTATTCCTCCCCCTCCCACTCCTATTCCACTCAACTTAAATCCCACTATTTACACTGTCCCCCACACAACCTGTCAACCCACAGCCAGCACTACCCTTTCACAGTAAACTCCCTCAACTTCGAACCCCATCACTCTATCCCTCTCCTTCAAGATCCCTCCTCAAGAACCCATCAGATCTTCCCCTTCTGCTCTTCAAATTTCACCAACTACTGCCCATGCCATGACCCATCACGAGAAAAGAGGTTCCCAGTCGATAAATTGTTTCACAGAGAGCGCCATTGTCCGAAACCCGATGAGAAGCTACAGTGCTTGGTTCCTAGGCCGGTTGGTTACAAAAAGCCGTTCCCGTGGCCGAAGAGTATACACTATGCTTGGTTTGACAATGTGCCTTTTCCTAAGCTTACTGTGTATAAGAAATCACAGAATTGGGTTCGGTTAGAAGGTGACCGGCTTGTTTTTCCCGGAGGAGGGACTTCGTTTCCAATGGGAGTGAAAGGTTATGTTGATATGATAAAGCAAGTGGTTCCCTTGAAATCGGGGAGTATACGAACAGCTCTTGATGTTGGTTGCGGGGTTGCAAGCTTTGGAGCTTATCTGATGGACTATAACATATTGACTTTGTCAATAGCACCGAGAGATATCCATGAAGCTCAGGTACAGTTTGCCTTGGAAAGAGGTCTTCCAGCAATGCTTGGAATCTTTAGCATCTACAGATTACCGTTCTCATCAAGATCATTTGATATGGCTCATTGTTCTCGTTGCCTTGTGCCATGGACCAGATATGATGGACTATATCTGATGGAGATTGATCGGGTTTTGCGTCCTGGAGGGTATTGGATTCTGTCCGGGCCTCCTATAAGTTGGAAGATTAGTTACAAAGGTTGGCAGAGAAGAGCTGCGGATTTGAGGAAAGAGCAAATGAGCTTGGAAGATCTTGCCAGAAGATTGTGCTGGAAAAAGGTTGAAGAGAAGGGACCTATTGCAGTCTGGAGAAAGCCTACAAATCATATTCATTGCATCCAAAAGGTGAAGACTTGGAAATCGCCCAACTTTTGTCATAGCAGTGACTCTGATTCCAGTTGGCTCAAAGAGATGGATCCATGCATTACCCCTCTTCCAAATGTGGAAGATGTTCATGATATGTCAGGAGGTACTCTTGAGAAATGGCCTAAAAGGTTGAACTCTCCTCCTCCAAGGATTATAACTGGCAATATTAAAGGAATTACAGTACGAGCATTTAACGATGATAACCAACTATGGAAAAGAAGAGTTTCTCATTATGGCATCATTCTAAAATCTCTACTAATTAGTGGGAGATATAGAAATGTCATGGATATGAATGCTGGCTTAGGAGGCTTTGCAGCGGCACTTGTTAAGTACCCGCTTTGGGTTATGAATGTTATTCCTTTCGACTCAAACAATAATAATACCCTTGGTGTTATCTACGAGCGTGGCCTCATCGGAACTTATATGAACTGGTGTGAGGCCTTCTCAACGTATCCTCGAACGTATGATCTGATCCATGCCCATTATTTATTCAGCATGTACATAGACAAGTGTGACATTGTTGATATCCTCCTCGAGATGTATCGGATTCGTCGTCCAGATGGGGTTGTCTTGATACGAGACCATGTTGACATCATTGTGAAGGTTAATGGCGTCATAGATCGAGTTAAATGGAAAGGCAAAATATTTCACAGTGAGAATGGACCTCTTCATCCTGAGAAGATACTACTTGTTGACAATTCTGCATAA 1878 43.77 MAPPLQPPQSSTPSFLKKPLLKLFFTTILCSVSYFLGIDINYSSPSHSYSTQLKSHYLHCPPHNLSTHSQHYPFTVNSLNFEPHHSIPLLQDPSSRTHQIFPFCSSNFTNYCPCHDPSREKRFPVDKLFHRERHCPKPDEKLQCLVPRPVGYKKPFPWPKSIHYAWFDNVPFPKLTVYKKSQNWVRLEGDRLVFPGGGTSFPMGVKGYVDMIKQVVPLKSGSIRTALDVGCGVASFGAYLMDYNILTLSIAPRDIHEAQVQFALERGLPAMLGIFSIYRLPFSSRSFDMAHCSRCLVPWTRYDGLYLMEIDRVLRPGGYWILSGPPISWKISYKGWQRRAADLRKEQMSLEDLARRLCWKKVEEKGPIAVWRKPTNHIHCIQKVKTWKSPNFCHSSDSDSSWLKEMDPCITPLPNVEDVHDMSGGTLEKWPKRLNSPPPRIITGNIKGITVRAFNDDNQLWKRRVSHYGIILKSLLISGRYRNVMDMNAGLGGFAAALVKYPLWVMNVIPFDSNNNNTLGVIYERGLIGTYMNWCEAFSTYPRTYDLIHAHYLFSMYIDKCDIVDILLEMYRIRRPDGVVLIRDHVDIIVKVNGVIDRVKWKGKIFHSENGPLHPEKILLVDNSA 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3900805 3904367 - Conep11aG0063800.1 Cone11ag0622 447874

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0622 625 FunFam probable methyltransferase PMT21 199 376 - -
Cone11ag0622 625 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 472 587 IPR029063 -
Cone11ag0622 625 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 110 622 IPR004159 GO:0008168(InterPro)
Cone11ag0622 625 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 132 363 IPR029063 -
Cone11ag0622 625 Gene3D Vaccinia Virus protein VP39 200 375 IPR029063 -
Cone11ag0622 625 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 23 623 IPR004159 GO:0005737(PANTHER)|GO:0005768(PANTHER)|GO:0005802(PANTHER)|GO:0008168(InterPro)
Cone11ag0622 625 Coils Coil 333 353 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0622 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0622 Cone-Chr11:3900805 Cone8ag0573 Cone-Chr8:4569164 1.41E-245 dispersed
Cone11ag0622 Cone-Chr11:3900805 Cone11ag0402 Cone-Chr11:1985533 2.48E-234 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1151 . . . . . Bpe14g00997 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone11ag0622 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0029960 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 2