Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0649 ATGGCTTCGTCTTCTTCCTGTTCAACTTCATTTCTGCTCCTTCCACTCGGTTCTGCTTCTACAAAATACCCAGCTATAACTCATCGAGGAATTTCCGTTGAGAAAATTCCGAGTTTGGTTGTTCGGTGCTTGAATTCAAAATTTGCATTTAAAGATTTGCTGAGGACTCGAGAGGACATGATTGAATCCCGTTCGATAAGACGCAGGGAAGCGATCGGATTAGTTTTTGGATTGTCTAGTCTCTTCATCAAATCCGTTGATGCCAATGGGGCTGGCTTGCCTCCCGAGGAAAAGCCCAAACTATGCGGTGATGATTGTGAGAAAGAGCTTGAAAATGTACCAATGGTGACTACAGAATCTGGTTTGCAGTATAAGGATATTAATGTCGGTGTAGGCCCTAGTCCACCAGTTGGTTTTCAGGTGGCTGCAAATTACGTTGCCATGGTTCCTTCTGGACAAATTTTTGACAGTTCATTGGAGAAGGGTCAACTTTATATCTTTCGTGTTGGATCTGGTCAGGTGATCAAGGGACTTGATGAAGGAATTTTAAGCATGAGAGTGGGTGGAAAGCGCCGACTATACATCCCAGGATCTTTGGCGTTCCCTAAAGGTCTTACTTCAGCTCCGGGAAGGCCAAGGGTAGCACCGAACAGTCCCGTGATCTTTGATGTTAGTTTGGAATATGTGCCTGGCCTTGACATAGATGAGGAGTAG 714 44.96 MASSSSCSTSFLLLPLGSASTKYPAITHRGISVEKIPSLVVRCLNSKFAFKDLLRTREDMIESRSIRRREAIGLVFGLSSLFIKSVDANGAGLPPEEKPKLCGDDCEKELENVPMVTTESGLQYKDINVGVGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGQLYIFRVGSGQVIKGLDEGILSMRVGGKRRLYIPGSLAFPKGLTSAPGRPRVAPNSPVIFDVSLEYVPGLDIDEE 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4313548 4317256 - Conep11aG0066600.1 Cone11ag0649 447901

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0649 237 FunFam Peptidylprolyl isomerase 110 228 - -
Cone11ag0649 237 Gene3D - 110 228 IPR046357 GO:0003755(InterPro)
Cone11ag0649 237 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 135 226 IPR001179 GO:0003755(InterPro)
Cone11ag0649 237 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 138 230 IPR001179 GO:0003755(InterPro)
Cone11ag0649 237 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 88 229 - GO:0003755(PANTHER)
Cone11ag0649 237 SUPERFAMILY FKBP-like 115 227 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0649 K01802 - - mdm:139194903 329.331
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0649 Cone-Chr11:4313548 Cone15ag0569 Cone-Chr15:2863758 8.79E-13 dispersed
Cone7ag0956 Cone-Chr7:7442292 Cone11ag0649 Cone-Chr11:4313548 1.05E-10 transposed
Cone11ag0649 Cone-Chr11:4313548 Cone18ag0950 Cone-Chr18:6924658 3.23E-09 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1287 . . Bda03g00972 . Bpe04g00898 . . . . . . Cma14g01427 . Car14g01257 Sed12g0549 . Cpe03g01199 Bhi01g03696 Tan10g1419 Cmetu07g0756 . . . . . . . . . . . . . . Cone11ag0649 . . . Cme07g01953 . . . . . . . . . . Cmo14g01463 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009069 1 2 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 33