Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0660 ATGGACAAGGACAAGCCACAAGGCCAGGGTGGAGGTTTTCCTCCTCCGTCAGGACGTTACTCAGGCTTTTCACCTGCTGGCAATAATTTCAATTCCAAACCTGAGCAATCCTCATCTTCGATGTTATTTGCTTCGATGGCTCCTGGTGGGAGTGCGGAAATTGGTCAATTTAATCATGGAATGTCTGATTCTAATCGCTTCAGTCATGATATTAGTCGAATGCCTGACAATCCACCAAGAAGTAGGGGTCACAGACGGGCCCATTCCGAAATCCTTACTCTTCCTGATGATATCAGTTTTGATAGTGATCTTGGAGTCGTAGGTGGGGCTGATGGGCCATCATTTTCTGATGATACTGAGGAAGATTTGTTGTCCATGTATCTCGATATGGATAAGTTCAATGCATCATCTGCAACATCAACATTTCAAGTGGGGGAGCCATCGTCAGCTGTAGCCGGAGGAACATCTGCTCTGACACCTGGATCAGCTACTTCTGATGAAAATCTTGCCATTGGGTCTAATGGGAGGCCTAGAATTAGGCACCAACATAGCCAGTCCATGGATGGGTCCTCAACAATCAAACCAGAGATGCTTGTCTCAGGATCTGATGATCTCTCTGCAGCTGATACCAAGAAAGCCATGTCAGCCGCAAAGCTTGCAGAGCTAGCACTGATTGATCCCAAACGTGCGAAGAGGATCTGGGCAAACAGGCAATCAGCTGCTAGATCAAAGGAAAGAAAGATGCGGTACATTTCTGAACTTGAACGGAAAGTGAAGACTTTGCAAACCGAAGCAACTTCTTTGTCTGCTCAGCTAACCCTCCTGCAGAGAGATACAAATGGTCTCTCTGTTGAGAATAGTGAACTGAAATTGCGGTTACAATCAATGGAGCAACAGGTTCACCTGCAAGATGCTTTGAATGATGCATTGAAGGAGGAAATTCAGCATCTGAAAGTAATGACAGGTCAGGCATTTCCAAATGGTGGGCCCCTCATGAACTTTGCTCCTCCCTTCGGAGCCGACCAGCAATTTTATTCCAACAACCATGCAGCTTCCATGCAAACTCTCTTGACTGCACAACAATTTCAGCAGCTCCAGATTCAGTCTCAGAAGCAGCAGCTTCAGCAGCATCAATTACATCAGCAGCTTCAGCAGCATCAACAACAGCAGCAGCAGCAACAAACTGGGGAGTTGAAAATGAGAGGGGGGCCCAGTTCTTCTCCAAGCCAGAACGACAGTTCATCAGATATGAATTCTTCTACCTCAAAGGATTGTTGA 1278 46.32 MDKDKPQGQGGGFPPPSGRYSGFSPAGNNFNSKPEQSSSSMLFASMAPGGSAEIGQFNHGMSDSNRFSHDISRMPDNPPRSRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDDTEEDLLSMYLDMDKFNASSATSTFQVGEPSSAVAGGTSALTPGSATSDENLAIGSNGRPRIRHQHSQSMDGSSTIKPEMLVSGSDDLSAADTKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYISELERKVKTLQTEATSLSAQLTLLQRDTNGLSVENSELKLRLQSMEQQVHLQDALNDALKEEIQHLKVMTGQAFPNGGPLMNFAPPFGADQQFYSNNHAASMQTLLTAQQFQQLQIQSQKQQLQQHQLHQQLQQHQQQQQQQQTGELKMRGGPSSSPSQNDSSSDMNSSTSKDC 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4403987 4408621 + Conep11aG0067700.1 Cone11ag0660 447912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0660 425 MobiDBLite consensus disorder prediction 22 45 - -
Cone11ag0660 425 Pfam bZIP transcription factor 228 279 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone11ag0660 425 CDD bZIP_plant_RF2 229 278 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone11ag0660 425 MobiDBLite consensus disorder prediction 178 193 - -
Cone11ag0660 425 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 226 289 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone11ag0660 425 SMART brlzneu 224 288 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone11ag0660 425 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 68 402 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cone11ag0660 425 MobiDBLite consensus disorder prediction 1 88 - -
Cone11ag0660 425 MobiDBLite consensus disorder prediction 174 193 - -
Cone11ag0660 425 Coils Coil 244 313 - -
Cone11ag0660 425 SUPERFAMILY Leucine zipper domain 228 279 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone11ag0660 425 MobiDBLite consensus disorder prediction 145 168 - -
Cone11ag0660 425 MobiDBLite consensus disorder prediction 379 425 - -
Cone11ag0660 425 MobiDBLite consensus disorder prediction 69 88 - -
Cone11ag0660 425 Gene3D - 227 280 - -
Cone11ag0660 425 FunFam probable transcription factor PosF21 227 280 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0660 Cone-Chr11:4403987 Cone5ag0141 Cone-Chr5:607378 1.21E-56 dispersed
Cone11ag0660 Cone-Chr11:4403987 Cone18ag0852 Cone-Chr18:5842041 5.34E-251 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44333 PF03145 Sina 2.70E-69 CL0389 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0660 - - - 0.0