Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0700 ATGTCGGCGCTCGCAGCTTCTGGCACCGCCGGGGTGTTGAGAAACGTCAATTGGTTGCTTCCAAAGCGAATATTTGCATTGTGTTATGTGATCTCCATCACCCATGCTATTGTACCACCATATGATTTTCCAATATCCCCAGCATTATCTCCTAGTCATGTGATTTTGATCTCACCTGCTATTCCTGATCTTCCTCTTCCCACCAATTTACCACCTTCTCATAAACATTGGCAGAAGAATTTCTCACCCCGTTCTTTACCAAAAGCTGAGATAGCACCTTCAATTCCTCCCAATTACGGCCCTCTTGTAACTTCTGGTCATCCTCCAACTAGTTCACGAATGTCGAGACCATTGATGAAGAGGAGTGGATCAGCACCTCCAATTTCTGGCTTTGAAAACATTGCCCCACTACATTCAAGTGCTGGCACAATTTCTTCTGGTTTACCTCAGCCGCCATTGTCTCCTTATGCTTCCAATTGTTGCCAACCAGACATGGTGATGAAACGAGGAAGTCAGAATTGCCACTGTGTGTATCCCATAAGGCTTGACCTTCTTTTCTTTAATGTCTCACAAAATCCTAGCTGGAATCTTTTCCTTGAAGAATTAGCATCACAGCTTCATTTGCGGGTTTCTCAGATTCAGCTGATTGACTTTTATGTACTCAGCTTATCAAGGTTAAATATCTCGATGCATATTACTCCGCATACCGGGCTGAGTTTCTCTTCTAGTGATGCATCTGCTATAAACTCTTCACTGTCAAATCATAAGGTTCATGTGGACCCTATTTTAGTGGGGGATTACAAGCTTCTTAATATAACCTGGTTTAGGCCTCCACCTCCTCAAGCTCCTCTTGTCACTTCATCACCCATGGTGGCCCCAACACACCAATCATCCACTTCTACAGCACATAATGCTTCAAATAATGGGAGACGCTCAAATTTGTCTCTGATTCTTGGTGTTATTTCTGGTCTTCTGTTCATTGCCACTCTATTTGTGCTTACTGTCTGTTTCTGCATATATGACCATGGGAAGATGAAAGAATCTACTGAAGTAGCAGGTAAACCGAGGGCTGTAGAGACAGTTCAACTAGTAGGATCCTTTTCCCACCTAACCAGTACTAGGTTTCTAGCTTATGAAGAACTTAAAGAAGCAACAAATAATTTTGAACCTGCAAGCATACTAGGAGAGGGTGGCTTCGGAAGAGTTTTCAAGGGCGTCTTAAGTGATGGGACACTTGTAGCCATCAAGAAGTTATCAAGTGGAGGGCAACAAGGGGATAAAGAGTTTCTGGTTGAAGTTGAAATGCTTAGCAGATTACATCACCGTAATCTTGTCAAGCTTGTTGGTTATTATAGCAGTCGAGATTCTTCACAACACTTGCTATGCTATGAGCTTGTCCCAAACGGCAGCTTGGAGGCCTGGCTCCATGGTCCTCTAGGAGAAAAATGTCCTTTGGATTGGGACACCAGAATGAAGATCGCACTTGATGCAGCTAGAGGACTTGCATACCTACACGAGGACTCACAACCTTGTGTTATCCACAGAGATTTCAAGGCATCCAATATACTGCTCGAGAATAATTTTCATGCTAAAGTTGCAGATTTCGGCCTTGCTAAACAGGCTCCTGAGGGAAGAACAAACTATCTGTCTACCCGTGTGATGGGCACATTTGGCTATGTAGCTCCTGAGTATGCAATGACTGGTCATCTACTAGTTAAGAGTGATGTTTATAGCTATGGAGTTGTTCTGCTGGAATTGCTCACTGGTAGGAGGCCTGTGGATATGTCTCAACCATCTGGACAAGAAAACCTGGTCACTTGGGCTCGACCGATTCTAAGAGACAAGGATAGGCTGGAAACCCTAGCGGATGCTAAACTTGGAGGGAAGTATCCAAAGGAAGATTTTGTTCGGGTTTGTACAATTGCTGCTGCCTGTGTTGCTCCTGAGGCAAGCCAAAGGCCCACGATGGGTGAAGTGGTTCAATCGCTTAAAATGGTGCAGAGAAGTAGAGAATATCCAGATTTGGTTGTGCAATCATCAAGTAACACGAAACCGAATCTTAGGCAGTCTTCAACTACTTTCGAGTCAGATGGGACATCATCTATGTTCTCTTCTGGACCTTATTCCGGTCTAATGTCCTTTGATCATGATAATGTCCCTAAGACAGCTGTTTTCTCTGAAGATCTTCACGAAGGACGATGA 2202 43.91 MSALAASGTAGVLRNVNWLLPKRIFALCYVISITHAIVPPYDFPISPALSPSHVILISPAIPDLPLPTNLPPSHKHWQKNFSPRSLPKAEIAPSIPPNYGPLVTSGHPPTSSRMSRPLMKRSGSAPPISGFENIAPLHSSAGTISSGLPQPPLSPYASNCCQPDMVMKRGSQNCHCVYPIRLDLLFFNVSQNPSWNLFLEELASQLHLRVSQIQLIDFYVLSLSRLNISMHITPHTGLSFSSSDASAINSSLSNHKVHVDPILVGDYKLLNITWFRPPPPQAPLVTSSPMVAPTHQSSTSTAHNASNNGRRSNLSLILGVISGLLFIATLFVLTVCFCIYDHGKMKESTEVAGKPRAVETVQLVGSFSHLTSTRFLAYEELKEATNNFEPASILGEGGFGRVFKGVLSDGTLVAIKKLSSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGSLEAWLHGPLGEKCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRRPVDMSQPSGQENLVTWARPILRDKDRLETLADAKLGGKYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRSREYPDLVVQSSSNTKPNLRQSSTTFESDGTSSMFSSGPYSGLMSFDHDNVPKTAVFSEDLHEGR 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4775332 4780179 - Conep11aG0071800.1 Cone11ag0700 447952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0700 733 MobiDBLite consensus disorder prediction 288 307 - -
Cone11ag0700 733 MobiDBLite consensus disorder prediction 92 124 - -
Cone11ag0700 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 512 524 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0700 733 Gene3D Transferase(Phosphotransferase) domain 1 466 684 - -
Cone11ag0700 733 ProSiteProfiles Protein kinase domain profile. 388 675 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0700 733 MobiDBLite consensus disorder prediction 104 118 - -
Cone11ag0700 733 ProSitePatterns Protein kinases ATP-binding region signature. 394 417 IPR017441 GO:0005524(InterPro)
Cone11ag0700 733 MobiDBLite consensus disorder prediction 675 706 - -
Cone11ag0700 733 FunFam Receptor-like serine/threonine-protein kinase ALE2 368 465 - -
Cone11ag0700 733 Pfam Protein tyrosine and serine/threonine kinase 392 663 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0700 733 PANTHER OS01G0750732 PROTEIN 159 705 IPR050885 -
Cone11ag0700 733 Gene3D Phosphorylase Kinase; domain 1 368 465 - -
Cone11ag0700 733 FunFam Receptor-like serine/threonine-protein kinase ALE2 466 684 - -
Cone11ag0700 733 SUPERFAMILY Protein kinase-like (PK-like) 365 664 IPR011009 -
Cone11ag0700 733 CDD STKc_IRAK 394 664 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0700 Cone-Chr11:4775332 Cone17ag0100 Cone-Chr17:531345 6.84E-117 dispersed
Cone5ag1242 Cone-Chr5:5799358 Cone11ag0700 Cone-Chr11:4775332 1.28E-69 dispersed
Cone11ag0700 Cone-Chr11:4775332 Cone17ag0409 Cone-Chr17:1940575 0 wgd
Cone11ag0700 Cone-Chr11:4775332 Cone18ag0752 Cone-Chr18:4146543 0 wgd
Cone11ag0700 Cone-Chr11:4775332 Cone18ag0817 Cone-Chr18:5195317 1.71E-117 wgd
Cone11ag0700 Cone-Chr11:4775332 Cone20ag1003 Cone-Chr20:7052299 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81888 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0700 - - - 0.0