Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0732 ATGTCTCGCCAAGCGGCAACGACGGCCTTCCACAAATCCAAGACACTCGACAACAAATACATGCTTGGGGATGAGATTGGAAAAGGAGCATATGGGCGAGTTTACAAGGGTTTGGATTTGGAGAATGGGGACTTTGTGGCCATTAAGCAAGTTTCCTTAGAGAACATTGCTCAGGAGGATCTGAACATTATCATGCAAGAGATAGATTTGCTGAAGAATCTGAACCACAAGAATATTGTGAAGTATCTTGGATCTTCAAAAACAAAGACTCACCTCCATATAATACTTGAGTACGTGGAGAATGGTTCACTTGCCAACATTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCTTTGGTTGCTGTTTACATTGCTCAGGTTTTGGAAGGCTTGGTTTATCTACATGAACAGGGTGTAATTCATCGGGATATCAAGGGTGCTAACATATTGACAACCAAAGAGGGTCTTGTGAAGCTTGCCGATTTTGGCGTTGCAACGAAATTAACCGAGGCTGATGTCAATACGCATTCAGTTGTTGGAACTCCTTACTGGATGGCCCCAGAGGTGATTGAAATGTCTGGGGTCTGTGCAGCTTCTGACATTTGGAGTGTTGGCTGCACTGTTATTGAACTCCTAACTTGTGTGCCTCCTTATTATGATCTACAGCCAATGCCAGCACTTTTTCGCATTGTTCAGGATGAGCATCCTCCAATGCCTGATAGCCTCTCACCGGATATTACAGATTTTCTTCGTCAGTGCTTTAAGAAGGATGCTAGGCAAAGGCCTGATGCAAAAACATTACTCTCTCACCCTTGGATACAAAATTGCAGGAGGGCCTTGCAGTCTTCCCTGCGCCCCAGTGGAACGTTGAGAAATGTCCAGGAAGATACTTCAGTAGATACAGAACTTCCTAATGGGGACAATCAAAACTCTAGTGAAAGCCCTTTGCCTGAGAAAGCTGAAGCAGCTGGTTCTGATATTAAGGATGACTCCAGGAAGGTTTTATCATCACCAATTGAAATTGATGAGGTGGGAAACGCTGATAATCATCATGCTACAAATGCTATTGATGAGAGAAGTGATAGCATGGAAGATGAGCTTTCATCAGATCAGGTTCCCACCTTATCCATCCTTAAAAGACCATCTCTTCTGACTGGTTCCAGCAGAACACCATCTAGTAAGGATCTTGCTGTCTCTGATACAACGGAGTTTCACGAGCCATCAACTAATAATGAAATGTTGATGAATGGTGAGGTTGCCGATTTGGGAGCTTCTGAATCCAGAAGGAAAAATATTTCTAGAGTATCCGCACAAGTGGGAAGTAGATTGCTTGGTTTTGGACCAAGAAGTCAAGATAATAGTTTTCACAAGGCTTCCAAGATGTCAGCAAATTTGGGGGGAAACGAGCTAAGTCGGTTTAGTGATACTCCTGGGGATGCATCATTGGATGATTTATTTCATCCATTGGAAAAACATGAGGAGCATGCAGCTGAGGCTTCAACTTCATCATCAGCATCAAATTTAAACCAAGGCAATGTACCAGTAACAGATGCTGGAAAAAATGACCTTGCTACAAAGTTAAGAGCAACAATTGCTCAAAAGCAGATGGAAAATGAAATGGGTCAGGCAAATGGTGGGGGTGACTTGTTGCGTTTAATGATAAAACTGAAGGATGACGTCATTGATATTGATGATTTGGTTTTTGATGAAAAGTTGCCTGGAGAAAATCTTTTCCCCCTGCAGGCTGTTGAGTTTAGCAGATTAGTTGGGTCATTGAGACCTGAGGAACCAGAGGAGGTGATTGTATCTGCCTGTCAGAAACTTGTTTCTATATTCCACCAACGACCTGAGCAGAAACTCGTTTATGTTACTCAGCACGGTTTGCTTCCTCTGATAGAATTGTTAGAGGTTCCTAAAGCTCGTGTTACATGTTCTGTACTTCAACTTATAAATCAGATAATTAGAGACAATACTGATTTTCAAGAAAATGCCTGTCTTGTTGGTATGATCCCATTGGTGATGGGCTTTGCTGTGCCTGATCGTCCCCGAGAAGTTCGTATGGAAGCAGCTTATTTTCTTCAGAAACTTTGTCAATCAAGCTCCTTGACTTTGCAAATGTTCATCTCTTGTCGTGGAATACCTGTGTTGGTGAGCTTTCTTGAGGCTGATTATTTCAAATACAGGGAAATGATTCATCTAGCTATTGACGGCATATGGCAGATCTTTAAACTTCAGCGATCAACGCCTAGAAATGATTTCTGTCGTATAGCAGCAAAAAATGGGATACTGCTTAGGCTCATTAACACATTATATAGCTTAAATGAGGCAACTCATCTGGCTTCTATTGGTGGTGTACTGCCTGTTGATGGATCTTTTCAACGGCCTCGTTCCAGTCAGCTAGATCCTAACCATTCTATATTCATTCCAAGTGATGCCCCACTTTCTGCTACTGACCAACCAGATTTTACCAAGGCTAGGCATGGATTAATTGATCATCATCTGTCAACTGGAACACAAGAACCTGCACGTGCTTCGACTTCACATTCCCAGAGAGTTGATAACAGCCAATCAGATCCTCGTTACCATTCCATGGAGACTGATAGACCTCGATCAAGCAATGCTGCAATTGAGGGATCAGCTACCTCTAAATTACCAGATCCAACATCATTAGAGAAGGTTGTAAATCAAACAACCAAAGAACAATCTGCTAGTACATCTAAGGAGCGGGTTATTAATTCTAACAATAGAACATCTACAGATAGGCCCCCAAATGGCTATCCTGCAACAGTTGCTAATCAGCAAGAGCAAGTCAGGCCACTTCTAAGTCTATTAGATAAGGAACCCCCTTCCAGGCATTTCTCTGGTCAACTTGAGTATGTTCGCCATCTATCTGGATTAGAGAGACATGAAAGTATATTGCCATTATTGCATGCAGCTAATGAAAAAAAGACAAATGGTGAACTTGATTTTCTGATGGCAGAATTTGCTGATGTCTCTCAACGTGGGAAAGAGAATGGAAATGTTGAATCTAATGCAAGAATTTCGCATAAGTCAGTAACCAAGAAGATTGGACCCCTCGCTTCTAATGAAGTAGCTGCGTCGGTATCTGGGATTGCATCTCAAACAGCTTCAGGTGTATTGTCTGGTTCAGGTGTTCTAAATGCTAGACCAGGGAGTGCAACATCCTCCGGGCTTCTTTCACACATGGTTTCAACTTTGAATGCTGATGTTGCTAGAGATTATTTGGCAAAAGTGGCAGATCTTCTCCTCGAGTTTGCCCAAGCAGACACAAATGTAAAATCTTTCATGTGCAGCCAAAGCTTGCTTAGTCGTCTTTTCCAGATGTTCAACAGGGTGGAGCCTCCAATTCTTTTGAAGATATTGAAGTGTATAAATCATTTGTCAACCGATCCAAATTGCCTGGAGAGTCTACAACGGGCAGATGCAATTAAATATCTGATCCCTAATCTTGAACTCAAAGAAGGATCTCTTGTCTCTCAAATTCATCATGAGGTCCTGAATGCGCTTTTCAATTTGTGCAAGATAAATAAGAGGAGACAGGAACAAGCAGCAGAAAATGGCATCATTCCCCATTTGATGCATTTTATTATGTCAGATTCTCCCTTGAAACAATATGCATTACCTCTACTATGTGATATGGCCCATGCATCTCGTAATTCCAGAGAGCAGCTAAGAGCCCATGGTGGCTTAGATGTGTATTTGAGCCTTCTTGAGGATCAGTTTTGGTCTGTGACAGCATTGGATTCTATTGCTGTATGCTTAGCTCATGACAATGACAACCGGAAAGTTGAACAGGCGTTGCTAAAAAAGGATGCAGTTCAGAAATTGGTGAAGTTCTTCCAATGCTGTCCAGAACAGCATTTTGTGCATATATTAGAGCCGTTCTTGAAAATTATCACAAAATCCTCTCGAATAAATACAACATTGGCCGTTAATGGTTTGACACCATTGCTAATCATCAGGCTCGATCATCAGGATGCCATAGCTCGTCTCAATCTACTTAAATTGATAAAGGCGGTTTATGAGCATCATCCGCGGCCCAAGCAATTGATTGTAGAGAATGATTTGCCTCAGAAGCTTCAGAACTTGATAGAAGAACGCAGGGATGGACAAAGGTCTGGTGGGCAAGTACTGGTGAAACAAATGGCTACCTCACTGCTTAAAGCGCTTCATATAAACACCGTTTTGTAA 4215 41.95 MSRQAATTAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSSKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPMPDSLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRPSGTLRNVQEDTSVDTELPNGDNQNSSESPLPEKAEAAGSDIKDDSRKVLSSPIEIDEVGNADNHHATNAIDERSDSMEDELSSDQVPTLSILKRPSLLTGSSRTPSSKDLAVSDTTEFHEPSTNNEMLMNGEVADLGASESRRKNISRVSAQVGSRLLGFGPRSQDNSFHKASKMSANLGGNELSRFSDTPGDASLDDLFHPLEKHEEHAAEASTSSSASNLNQGNVPVTDAGKNDLATKLRATIAQKQMENEMGQANGGGDLLRLMIKLKDDVIDIDDLVFDEKLPGENLFPLQAVEFSRLVGSLRPEEPEEVIVSACQKLVSIFHQRPEQKLVYVTQHGLLPLIELLEVPKARVTCSVLQLINQIIRDNTDFQENACLVGMIPLVMGFAVPDRPREVRMEAAYFLQKLCQSSSLTLQMFISCRGIPVLVSFLEADYFKYREMIHLAIDGIWQIFKLQRSTPRNDFCRIAAKNGILLRLINTLYSLNEATHLASIGGVLPVDGSFQRPRSSQLDPNHSIFIPSDAPLSATDQPDFTKARHGLIDHHLSTGTQEPARASTSHSQRVDNSQSDPRYHSMETDRPRSSNAAIEGSATSKLPDPTSLEKVVNQTTKEQSASTSKERVINSNNRTSTDRPPNGYPATVANQQEQVRPLLSLLDKEPPSRHFSGQLEYVRHLSGLERHESILPLLHAANEKKTNGELDFLMAEFADVSQRGKENGNVESNARISHKSVTKKIGPLASNEVAASVSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSTLNADVARDYLAKVADLLLEFAQADTNVKSFMCSQSLLSRLFQMFNRVEPPILLKILKCINHLSTDPNCLESLQRADAIKYLIPNLELKEGSLVSQIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMHFIMSDSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLSLLEDQFWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQCCPEQHFVHILEPFLKIITKSSRINTTLAVNGLTPLLIIRLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPQKLQNLIEERRDGQRSGGQVLVKQMATSLLKALHINTVL 1404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5080800 5092517 + Conep11aG0075000.1 Cone11ag0732 447984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0732 1404 MobiDBLite consensus disorder prediction 345 367 - -
Cone11ag0732 1404 Gene3D - 578 786 IPR011989 -
Cone11ag0732 1404 SMART arm_5 1138 1182 IPR000225 GO:0005515(InterPro)
Cone11ag0732 1404 SMART arm_5 1184 1223 IPR000225 GO:0005515(InterPro)
Cone11ag0732 1404 SMART arm_5 701 744 IPR000225 GO:0005515(InterPro)
Cone11ag0732 1404 SMART arm_5 616 656 IPR000225 GO:0005515(InterPro)
Cone11ag0732 1404 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0732 1404 MobiDBLite consensus disorder prediction 323 338 - -
Cone11ag0732 1404 MobiDBLite consensus disorder prediction 500 517 - -
Cone11ag0732 1404 FunFam MAP3K epsilon protein kinase 1 17 306 - -
Cone11ag0732 1404 MobiDBLite consensus disorder prediction 285 410 - -
Cone11ag0732 1404 MobiDBLite consensus disorder prediction 836 930 - -
Cone11ag0732 1404 FunFam MAP3K epsilon protein kinase 1 578 786 - -
Cone11ag0732 1404 SUPERFAMILY ARM repeat 589 1290 IPR016024 -
Cone11ag0732 1404 CDD STKc_Cdc7_like 19 274 - -
Cone11ag0732 1404 MobiDBLite consensus disorder prediction 494 521 - -
Cone11ag0732 1404 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524(InterPro)
Cone11ag0732 1404 SMART serkin_6 20 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0732 1404 FunFam MAP3K epsilon protein kinase 1-like 1053 1399 - -
Cone11ag0732 1404 MobiDBLite consensus disorder prediction 869 930 - -
Cone11ag0732 1404 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Cone11ag0732 1404 MobiDBLite consensus disorder prediction 285 317 - -
Cone11ag0732 1404 MobiDBLite consensus disorder prediction 368 410 - -
Cone11ag0732 1404 Gene3D Transferase(Phosphotransferase) domain 1 17 312 - -
Cone11ag0732 1404 Gene3D - 1049 1400 IPR011989 -
Cone11ag0732 1404 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0732 1404 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0732 1404 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0732 1404 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0732 1404 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 597 1404 IPR052441 -
Cone11ag0732 1404 MobiDBLite consensus disorder prediction 839 858 - -
Cone11ag0732 1404 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0732 1404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0732 Cone-Chr11:5080800 Cone3ag0774 Cone-Chr3:3980942 2.23E-64 dispersed
Cone11ag0732 Cone-Chr11:5080800 Cone4ag0218 Cone-Chr4:999361 4.24E-68 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81891 PF01217 Clat_adaptor_s 7.50E-46 CL0431 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0732 - - - 0.0