Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0741 ATGGGTGGAAATTCCCCATGCGCTTCCTGCAAGTTGCTAAGGCGGCGATGCGCCAAGGACTGCATCTTCGCTCCTTACTTTCCGTCCGACGACCCCCACAAGTTCGCCATTGTTCATAAGGTCTTCGGTGCCAGCAATGTCAGCAAAATGTTACAGGAGCTTCCGGTTCAGCAGAGACCGGACGCGGTGAGCAGTCTAGTATACGAAGCGAATGCAAGGGTGAAAGACCCGGTTTATGGGTGTGTAGGGGCTATATCTTTCCTGCAGAATCAGGTGGCTCAACTACAAATGCAGCTTGCTATGGCTCAAGCGGAGATCCTGTGCATCCAGATGCAGCAAGAGCCTCATATGTTGCCTATCCCACTTGATCAGATAGACGACTCCGATTACGATCAGAAGTCGTATTTTCTCCAGAACACTACACTCCCAGCTCATCAGTGCCTCAACTTCTCCTCTTCTTCTTCTACTAGCAATGTAATCATTCATGATTCTCTAAAGAGAGAGACCATTTTTGGACATGACTTGGTCTCTTGA 534 49.06 MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRPDAVSSLVYEANARVKDPVYGCVGAISFLQNQVAQLQMQLAMAQAEILCIQMQQEPHMLPIPLDQIDDSDYDQKSYFLQNTTLPAHQCLNFSSSSSTSNVIIHDSLKRETIFGHDLVS 177
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5157765 5158491 + Conep11aG0076000.1 Cone11ag0741 447993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0741 177 Coils Coil 85 105 - -
Cone11ag0741 177 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Cone11ag0741 177 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 132 - -
Cone11ag0741 177 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0741 Cone-Chr11:5157765 Cone1ag1647 Cone-Chr1:57740210 3.67E-75 dispersed
Cone11ag0741 Cone-Chr11:5157765 Cone18ag0786 Cone-Chr18:4481951 1.70E-116 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44342 PF00013 KH_1 2.60E-11 CL0007 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0741 - - - 0.0