Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone11ag0794 | ATGGGGTGTTTTCCTTGTTTCGATTCGAGGGAAGAGGAGAAGCTGAATCCTGAGAAAGAAAGTGATGATGGGAAGCAAGTTCAGCAAAGTCTTTCTTCAAACATTTCTCGGTTGCCCTCTGGGGCTGATAAACTCAGAGCTAGAAGCCTTGGAGGATCCAAAATGGAACAACCACAAGTTCCAAAGGACTTGCCAGCTGGAAATATTGCAGCTCAGATATTCACTTTTCGAGAGCTTGCAGCTGCAACAAGGAATTTTCGGCCAGAGTGCTTCTTGGGGGAAGGAGGATTTGGACGTGTATATAAAGGCCGGCTTGAGAGCACTGGCCAGGTTGTTGCTGTCAAGCAATTGGATAGAAATGGTCTTCAGGGAAACAGGGAATTTCTTGTAGAGGTTTTAATGCTCAGCCTTTTACATCATCCTAATTTAGTGAATCTGATTGGATACTGTGCTGATGGGGATCAACGCCTCCTTGTTTATGAGTTCATGCCCTTGGGATCATTGGAAGATCACCTACATGATCTTCCCATTGACAAGGAATCACTAGACTGGAATACAAGAATGAAGATAGCGGCTGGTGCAGCCAGAGGCTTGGAATACCTTCATGACAAAGCAAATCCTCCCGTTATTTATAGGGATTTTAAGTCGTCCAACATTTTACTAGAGGAGGGATTTCATCCAAAGCTCTCTGATTTTGGGCTTGCAAAGCTGGGTCCAGTAGGAGACAAATCTCATGTTTCTACTAGGGTTATGGGAACTTACGGTTATTGTGCTCCGGAATATGCCATGACTGGACAACTCACAGTTAAGTCTGATGTTTACAGTTTTGGGGTCGTTTTCTTAGAGCTGATAACTGGACGTAAAGCCATTGATAACAGCCTACCGCACGGAGAACAGAACCTTGTCACATGGGCACGCCCATTTTTCAATGATCGTAGGAGATTCTCCAAATTGGCTGATTCAAGATTACAGGGACGATACCCGATGAGGGGGCTCTACCAAGCTCTGGCTGTGGCTTCAATGTGCATCCAAGAACAGGCTGCCACTCGTCCTCTAATTGGAGACGTGGTTACTGCTCTTTCTTACCTGGCCAATCAAGCCTATGATCCGAATAGTCCATCCGGGAATGAGAAGAGGAACAATAGAGACAGAAGTGGAGGTGGGGGTGGAAGGATTTTGAAGAAGGAAGAAGAAGTGGGAAGATCTGGGCGTAAATGGGATTTAGACGGTTCTGAGAAGGATGACTCACCTAAAGAGACAGCTCGGATGTTGAACCGAGATCTAGAGAGAGAACGAGCTGTGGCAGAGGCTAAAATGTGGGGGGAAAATTGGCGGGAGAAAAGAAGGCAAAGTGCACAAGGTAGTTTTGACGCTTCTAATGGATAG | 1386 | 45.89 | MGCFPCFDSREEEKLNPEKESDDGKQVQQSLSSNISRLPSGADKLRARSLGGSKMEQPQVPKDLPAGNIAAQIFTFRELAAATRNFRPECFLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPIDKESLDWNTRMKIAAGAARGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDNSLPHGEQNLVTWARPFFNDRRRFSKLADSRLQGRYPMRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLANQAYDPNSPSGNEKRNNRDRSGGGGGRILKKEEEVGRSGRKWDLDGSEKDDSPKETARMLNRDLERERAVAEAKMWGENWREKRRQSAQGSFDASNG | 461 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6350743 | 6355127 | + | Conep11aG0081800.1 | Cone11ag0794 | 448046 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone11ag0794 | 461 | SUPERFAMILY | Protein kinase-like (PK-like) | 69 | 360 | IPR011009 | - | |
Cone11ag0794 | 461 | ProSitePatterns | Protein kinases ATP-binding region signature. | 92 | 115 | IPR017441 | GO:0005524(InterPro) | |
Cone11ag0794 | 461 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 209 | 221 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone11ag0794 | 461 | Gene3D | Transferase(Phosphotransferase) domain 1 | 163 | 384 | - | - | |
Cone11ag0794 | 461 | ProSiteProfiles | Protein kinase domain profile. | 86 | 363 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone11ag0794 | 461 | Coils | Coil | 418 | 438 | - | - | |
Cone11ag0794 | 461 | MobiDBLite | consensus disorder prediction | 376 | 452 | - | - | |
Cone11ag0794 | 461 | CDD | STKc_IRAK | 92 | 360 | - | - | |
Cone11ag0794 | 461 | MobiDBLite | consensus disorder prediction | 7 | 25 | - | - | |
Cone11ag0794 | 461 | FunFam | Serine/threonine-protein kinase PBS1 | 59 | 162 | - | - | |
Cone11ag0794 | 461 | PANTHER | OS07G0668900 PROTEIN | 12 | 380 | - | - | |
Cone11ag0794 | 461 | Gene3D | Phosphorylase Kinase; domain 1 | 71 | 162 | - | - | |
Cone11ag0794 | 461 | MobiDBLite | consensus disorder prediction | 367 | 461 | - | - | |
Cone11ag0794 | 461 | Pfam | Protein kinase domain | 91 | 292 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone11ag0794 | 461 | FunFam | Serine/threonine-protein kinase PBS1 | 163 | 379 | - | - | |
Cone11ag0794 | 461 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0794 | Cone-Chr11:6350743 | Cone14ag0778 | Cone-Chr14:4523716 | 1.10E-216 | dispersed | |
Cone1ag0688 | Cone-Chr1:6432681 | Cone11ag0794 | Cone-Chr11:6350743 | 9.46E-48 | dispersed | |
Cone20ag1308 | Cone-Chr20:8501028 | Cone11ag0794 | Cone-Chr11:6350743 | 4.89E-97 | dispersed | |
Cone8ag1529 | Cone-Chr8:11506065 | Cone11ag0794 | Cone-Chr11:6350743 | 6.63E-98 | dispersed | |
Cone18ag1447 | Cone-Chr18:9726278 | Cone11ag0794 | Cone-Chr11:6350743 | 4.86E-132 | transposed | |
Cone11ag0794 | Cone-Chr11:6350743 | Cone18ag0817 | Cone-Chr18:5195317 | 2.00E-95 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81893 | PF00722 | Glyco_hydro_16 | 5.50E-62 | CL0004 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone11ag0794 | K13430 | - | csv:101219880 | 781.941 |