Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0794 ATGGGGTGTTTTCCTTGTTTCGATTCGAGGGAAGAGGAGAAGCTGAATCCTGAGAAAGAAAGTGATGATGGGAAGCAAGTTCAGCAAAGTCTTTCTTCAAACATTTCTCGGTTGCCCTCTGGGGCTGATAAACTCAGAGCTAGAAGCCTTGGAGGATCCAAAATGGAACAACCACAAGTTCCAAAGGACTTGCCAGCTGGAAATATTGCAGCTCAGATATTCACTTTTCGAGAGCTTGCAGCTGCAACAAGGAATTTTCGGCCAGAGTGCTTCTTGGGGGAAGGAGGATTTGGACGTGTATATAAAGGCCGGCTTGAGAGCACTGGCCAGGTTGTTGCTGTCAAGCAATTGGATAGAAATGGTCTTCAGGGAAACAGGGAATTTCTTGTAGAGGTTTTAATGCTCAGCCTTTTACATCATCCTAATTTAGTGAATCTGATTGGATACTGTGCTGATGGGGATCAACGCCTCCTTGTTTATGAGTTCATGCCCTTGGGATCATTGGAAGATCACCTACATGATCTTCCCATTGACAAGGAATCACTAGACTGGAATACAAGAATGAAGATAGCGGCTGGTGCAGCCAGAGGCTTGGAATACCTTCATGACAAAGCAAATCCTCCCGTTATTTATAGGGATTTTAAGTCGTCCAACATTTTACTAGAGGAGGGATTTCATCCAAAGCTCTCTGATTTTGGGCTTGCAAAGCTGGGTCCAGTAGGAGACAAATCTCATGTTTCTACTAGGGTTATGGGAACTTACGGTTATTGTGCTCCGGAATATGCCATGACTGGACAACTCACAGTTAAGTCTGATGTTTACAGTTTTGGGGTCGTTTTCTTAGAGCTGATAACTGGACGTAAAGCCATTGATAACAGCCTACCGCACGGAGAACAGAACCTTGTCACATGGGCACGCCCATTTTTCAATGATCGTAGGAGATTCTCCAAATTGGCTGATTCAAGATTACAGGGACGATACCCGATGAGGGGGCTCTACCAAGCTCTGGCTGTGGCTTCAATGTGCATCCAAGAACAGGCTGCCACTCGTCCTCTAATTGGAGACGTGGTTACTGCTCTTTCTTACCTGGCCAATCAAGCCTATGATCCGAATAGTCCATCCGGGAATGAGAAGAGGAACAATAGAGACAGAAGTGGAGGTGGGGGTGGAAGGATTTTGAAGAAGGAAGAAGAAGTGGGAAGATCTGGGCGTAAATGGGATTTAGACGGTTCTGAGAAGGATGACTCACCTAAAGAGACAGCTCGGATGTTGAACCGAGATCTAGAGAGAGAACGAGCTGTGGCAGAGGCTAAAATGTGGGGGGAAAATTGGCGGGAGAAAAGAAGGCAAAGTGCACAAGGTAGTTTTGACGCTTCTAATGGATAG 1386 45.89 MGCFPCFDSREEEKLNPEKESDDGKQVQQSLSSNISRLPSGADKLRARSLGGSKMEQPQVPKDLPAGNIAAQIFTFRELAAATRNFRPECFLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPIDKESLDWNTRMKIAAGAARGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDNSLPHGEQNLVTWARPFFNDRRRFSKLADSRLQGRYPMRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLANQAYDPNSPSGNEKRNNRDRSGGGGGRILKKEEEVGRSGRKWDLDGSEKDDSPKETARMLNRDLERERAVAEAKMWGENWREKRRQSAQGSFDASNG 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6350743 6355127 + Conep11aG0081800.1 Cone11ag0794 448046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0794 461 SUPERFAMILY Protein kinase-like (PK-like) 69 360 IPR011009 -
Cone11ag0794 461 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524(InterPro)
Cone11ag0794 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0794 461 Gene3D Transferase(Phosphotransferase) domain 1 163 384 - -
Cone11ag0794 461 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0794 461 Coils Coil 418 438 - -
Cone11ag0794 461 MobiDBLite consensus disorder prediction 376 452 - -
Cone11ag0794 461 CDD STKc_IRAK 92 360 - -
Cone11ag0794 461 MobiDBLite consensus disorder prediction 7 25 - -
Cone11ag0794 461 FunFam Serine/threonine-protein kinase PBS1 59 162 - -
Cone11ag0794 461 PANTHER OS07G0668900 PROTEIN 12 380 - -
Cone11ag0794 461 Gene3D Phosphorylase Kinase; domain 1 71 162 - -
Cone11ag0794 461 MobiDBLite consensus disorder prediction 367 461 - -
Cone11ag0794 461 Pfam Protein kinase domain 91 292 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0794 461 FunFam Serine/threonine-protein kinase PBS1 163 379 - -
Cone11ag0794 461 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0794 Cone-Chr11:6350743 Cone14ag0778 Cone-Chr14:4523716 1.10E-216 dispersed
Cone1ag0688 Cone-Chr1:6432681 Cone11ag0794 Cone-Chr11:6350743 9.46E-48 dispersed
Cone20ag1308 Cone-Chr20:8501028 Cone11ag0794 Cone-Chr11:6350743 4.89E-97 dispersed
Cone8ag1529 Cone-Chr8:11506065 Cone11ag0794 Cone-Chr11:6350743 6.63E-98 dispersed
Cone18ag1447 Cone-Chr18:9726278 Cone11ag0794 Cone-Chr11:6350743 4.86E-132 transposed
Cone11ag0794 Cone-Chr11:6350743 Cone18ag0817 Cone-Chr18:5195317 2.00E-95 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81893 PF00722 Glyco_hydro_16 5.50E-62 CL0004 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0794 K13430 - csv:101219880 781.941