Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0803 ATGGCTGAAGCTAGACAACCCCTATGGAGAAAAGTCCCAGTCCCTTCAAGCAAAATCAGTCCATACCGTATAGTCATTGTTCTCCGCCTCATAATCCTCGGCTTCTTCTTCCATTTCCGGATCTTAACTCCCGCCTATGATGCTTTTCCTTTATGGCTCATATCTGTTATATGTGAAATATGGTTTGCACTCTCTTGGATACTTGACCAGTTTCCAAAATGGAACCCAATAAACCGGGAAACTTACTTGGACCGGCTTTCAATGAGGTTCGAGCGGGAAGGTGAGCCAAATAGCTTAGCGCCGGTTGATGTCTATGTGAGCACTGTGGACCCGCTTAAGGAGCCGCCTATTATAACCGCAAACACGGTACTTTCGATCCTGTCCATTGATTATCCAGTTGATAAGGTGACATGTTATGTATCGGACGATGGTGCTTCCATGCTTCTTTTCGATTCGTTGTCTGAAACTGCTGAGTTTGCGAGAAGGTGGGTCCCTTTTTGTAAGAAGTACAGTGTTGAGCCGAGGGCGCCTGAGTTTTACTTCTCACAGAAGATTGATTACTTGAAAGATAAGGTGCTTGCGAGCTTTGTCAAGGAGCGCAGAGCTATGAAGAGAGAGTATGAAGAGTTCAAAGTGAGGATAAATGCATTGGTGGCAAAGGCACAGAAGAAACCCGAAGAAGGATGGGTTATGCAAGATGGCACTCCTTGGCCGGGGAACAACACTCGTGATCATCCCGGAATGATTCAGGTTTATCTAGGAAGTGAGGGTGCACTAGATGTAGAAGGCAAGGAATTGCCACGACTAGTGTACATTTCCCGTGAGAAACGACCTGGCTATCAACATCACAAGAAAGCCGGTGCTATGAATGCTCTAGTTCGAGTTTCTGCCGTGCTTACAAATGCTCCTTTTATGCTGAATCTGGATTGTGATCACTACATAAACAACAGCAAGGCCGTAAGAGAAGCAATGTGCTTTCTAATGGATCCTCAGCTGGGTAAGAAGCTCTGCTATGTCCAATTCCCACAAAGATTCGACGGTATAGATCGCCACGATAGATATGCTAATCGCAATATCGTCTTTTTTGATATTAACATGAGAGGCTTAGATGGAATCCAAGGCCCGGTGTATGTCGGGACAGGATGTGTCTTTAACCGGCAGGCCTTGTACGGATATGACCCACCCGTTTCAGAGAAACGGCCCAAGATGACATGTGATTGCTGGCCTTCATGGTGCTGCTGTTGTTGTGGTGGTTCAAGGAAGTCTAAGTCAAAGAAGAAAGTGGAAAGCAGAGGTTTGCTCGGTGGGCTCTACTCGAAGAATAAGAAAATGATGGGGAAGAATCATGTCCGGAAAGGGTCTTCTGGACCGGTTTTTGATCTTGAAGAGATTGAAGAAGGGCTTGAAGGCTATGATGAGTTGGAGAAATCATCTCTCATGTCACAGAAGAATTTCGAGAAACGGTTCGGTCAATCTCCGGTTTTTATTGCATCAACTCTTATGGAAGATGGGGGTTTACCTGAAGGAACCAATAATAGGGGATCACTAATTAAGGAGGCTATTCATGTCATAAGCTGTGGATATGAAGAGAAAACCGAATGGGGCAAAGAGATTGGTTGGATTTATGGTTCGGTCACGGAAGATATCCTAACAGGCTTCAAAATGCATTGTAGAGGATGGAAATCAGTTTATTGCATGCCAAAGAGGCCAGCTTTCAAGGGATCAGCCCCGATAAATCTATCAGACCGATTGCACCAAGTTCTTAGATGGGCTCTAGGTTCAGTTGAAATTTTCCTTAGCCGGCATTGCCCTTTATGGTATGGCTATGGAGGGAAATTAAAATGGCTAGAGAGGCTTGCTTACATAAACACCATTGTCTATCCCTTCACTTCCATCCCCTTACTCGCCTATTGCACTATTCCTGCCGTTTGTCTTCTCACTGGAAAATTCATCGTCCCCACTCTGAATAACTTTGCTAGCATATGGTTTATGGCTCTATTCTTATCCATCATTACAACGTCCATTTTAGAGCTTAGATGGAGTAATGTGAGCATAGAGGATTTATGGCGAAACGAGCAATTTTGGGTCATAGGAGGTGTCTCTGCTCATATTTTTGCCGTTTTCCAAGGCCTTCTTAAGGTTCTTGCTGGTGTAGATACTAACTTTACAGTGACATCAAAAGCAGCAGATGATGCCGAATTTGGTGACCTCTACCTCTTTAAATGGACTACTCTTCTTATCCCGCCTACCACTTTGATCATCTTGAACATGGTGGGTGTCGTGGCCGGAGTTTCTGATGCTATAAACAATGGATATGGCTCATGGGGCCCACTTTTCGGGAAACTGTTTTTCGCCTTCTGGGTTATTGTTCATCTCTATCCTTTCCTTAAGGGTTTGATGGGAAGGCAGAATAGGACACCAACTATTGTGGTTTTGTGGTCAGTCCTTCTTGCTTCAATCTTTTCATTGATCTGGGTTAGGATCGATCCTTTCTTGCCCAAGCAAACTGGTCCTGTTCTTAAACAATGTGGGGTAGAGTGCTAG 2544 44.61 MAEARQPLWRKVPVPSSKISPYRIVIVLRLIILGFFFHFRILTPAYDAFPLWLISVICEIWFALSWILDQFPKWNPINRETYLDRLSMRFEREGEPNSLAPVDVYVSTVDPLKEPPIITANTVLSILSIDYPVDKVTCYVSDDGASMLLFDSLSETAEFARRWVPFCKKYSVEPRAPEFYFSQKIDYLKDKVLASFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLVYISREKRPGYQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINMRGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCGGSRKSKSKKKVESRGLLGGLYSKNKKMMGKNHVRKGSSGPVFDLEEIEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGGLPEGTNNRGSLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKWLERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIVPTLNNFASIWFMALFLSIITTSILELRWSNVSIEDLWRNEQFWVIGGVSAHIFAVFQGLLKVLAGVDTNFTVTSKAADDAEFGDLYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASIFSLIWVRIDPFLPKQTGPVLKQCGVEC 847
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6511721 6515147 + Conep11aG0082700.1 Cone11ag0803 448055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0803 847 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 23 816 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER)
Cone11ag0803 847 SUPERFAMILY Nucleotide-diphospho-sugar transferases 115 670 IPR029044 -
Cone11ag0803 847 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 207 394 IPR029044 -
Cone11ag0803 847 FunFam Cellulose synthase 219 393 - -
Cone11ag0803 847 Pfam Cellulose synthase 102 840 IPR005150 GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro)
Cone11ag0803 847 Coils Coil 200 220 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0803 Cone-Chr11:6511721 Cone18ag0800 Cone-Chr18:4711339 0 dispersed
Cone11ag0803 Cone-Chr11:6511721 Cone17ag0440 Cone-Chr17:2065330 2.60E-279 wgd
Cone11ag0803 Cone-Chr11:6511721 Cone20ag0973 Cone-Chr20:6919909 4.60E-278 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0803 K10999 - vvi:100241197 1579.69