Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0811 ATGGTGGTTCCGAAGTTATCTCCTCGGTATGTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCGGAAGAGCTTCCCTGATTGTCAAGGCAATATCTTCTTCTTCTCCATCAAATGTAGAGCTTCTGCTCGGAGATATTAAAGCCTCCTTGCAAGGTAACTCAGAAAACCTTCTCTTGAGCTCTTGGAACTTGTCTGTACCCGCTTGTCAATGGAGAGGACTCAAATGGGTCTTCCCCGATGGCTCTCCTTTACTCTGCAGTGATCCATCTTCACCGCAATGGAACAACCTTTCTCTCTCTAAAGACCCTTCTCTTCATCTTCTCGCCATTCAGCTTCCTTCTGCTAATCTCACCGGTTCATTATCTAGAGAGCTCACTGAGTTCACTATGCTTAAAAGTCTCTACCTTAACTTCAATTATTTAAGTGGAAAAATCCCTCTTGAACTAGGCTACAGTTCCTCCCTCTCTGATATTGATTTGAGTAGCAATTTGTTAAGTGGAGCTCTGCCTCCATCGATCTGGAATCTATGTGATAGACTTGTTTCTTTGAGGTGTCGTAGTAATTCACTAGCTGGGACCATTTCCGAACCTGCATTGCCAAATTCAACTTGCAACAGCTTGCTAGTATTGGATTTGAGTGACAATAAGTTGTCAGGTAATTTCCCTGAATTCATAACCAGGTTTGAGAATCTTAAAGAGATTGATCTTTCAAATAACTTGTTGTTCGGTTCAATTCCACAGAGCCTGGGTGGCTTAAAATTAGAAAAATTGAATCTTTCGCACAATAATTTTACGGGAGCTTTGCCAGTTTTTAGTGATTCTAAGTTTGGGGTGGAGGTTTTTGAAGGGAATGATCCTGGACTATGTGGGCTGCCCTTGAAAAGTTGTAGCGAAAGTTCAGGGTTGAGCTCGGGTGCCATTGCAGGTATTGTAATAGGGCTTATGACTGGGACTGTGGTTTTGGCTTCATTGCTGATCGGTTATATGCAAAATAAGAAGAGGAAAAGTAGATATGAAAGTGAAGGTGAGTTGCAGGAAGGAGAAGATGAAGAAACCAATAGTGAAGGTGGTGAGGGTAGGCTAATTTTGTTTCCAGGCGGCGAGCATTTGACTCTAGAAGATGTGTTGAATGCGACAGGACAAGTAATGGAGAAGACTAGCTATGGGACTGTGTACAAGGCTAAGCTTGCTGATGGAAGCACAATTGCTCTGAGGTTGTTGAGAGAAGGTAGTTGTAAAGATAGGAGCTCTTGCTTACCTGTAATAAAGCAGCTTGGAAAGGTTCGGCATGAGAATTTGATTCCATTGAGAGCTTTCTATCAGGGGAAGAGAGGAGAAAAATTACTCATTTATGACTTTTTGCCTCAGAGAACCCTTCACGATCTCTTACATGAATCCAGAGTGGGAAAACCCGTATTGAACTGGGCTAGGCGTCACAAGATTGCGCTGGGCATAGCCCGAGGACTAGCTTTTCTTCATTCTGGTGTTGATACACCCATCACACATGGGAATGTGAGATCAAAAAATGTTCTAGTTGATGACTTTTTCGTTGCCCGTCTGACTGAATTTGGGCTTGACAAGCTAATGATCCCTGCTGTCGCTGATGAAGTTGTGGCACTTGCAAAAGCTGATGGCTATAAGGCCCCAGAGCTTCAAAAGATGAAGAAATGTACTTCAAGGACTGACGTTTATGCATTTGGTATTTTGTTATTGGAGATTTTGATCGGCAAGAAACCGGGAAAAAATGGGAGAAGTGGTGCATCCGTAGATTTCCCCTCCATGGTGAACGTAGCTGTATTGGAGGAGACTACAATGGAGATTTTTGATGTGGAGGTTTTGAAAGGCATAAAGAATCCCATGGAAGATGGGTTAATTCAAGCATTGAAGCTTGCTATGGGTTGCTGTGCTCCAGTGGTCACGGTGAGACCTAGCATGAATGAAGTTGTGAAACAGTTGGAGGAGAATAGACCAAGGAACAGGTCCGCTCTGTATAGCCCTTCAGAAACAAGGAGTGAAATTGGTACCCCATTTTGA 2043 43.02 MVVPKLSPRYVVFFFFFFFFFFFIGRASLIVKAISSSSPSNVELLLGDIKASLQGNSENLLLSSWNLSVPACQWRGLKWVFPDGSPLLCSDPSSPQWNNLSLSKDPSLHLLAIQLPSANLTGSLSRELTEFTMLKSLYLNFNYLSGKIPLELGYSSSLSDIDLSSNLLSGALPPSIWNLCDRLVSLRCRSNSLAGTISEPALPNSTCNSLLVLDLSDNKLSGNFPEFITRFENLKEIDLSNNLLFGSIPQSLGGLKLEKLNLSHNNFTGALPVFSDSKFGVEVFEGNDPGLCGLPLKSCSESSGLSSGAIAGIVIGLMTGTVVLASLLIGYMQNKKRKSRYESEGELQEGEDEETNSEGGEGRLILFPGGEHLTLEDVLNATGQVMEKTSYGTVYKAKLADGSTIALRLLREGSCKDRSSCLPVIKQLGKVRHENLIPLRAFYQGKRGEKLLIYDFLPQRTLHDLLHESRVGKPVLNWARRHKIALGIARGLAFLHSGVDTPITHGNVRSKNVLVDDFFVARLTEFGLDKLMIPAVADEVVALAKADGYKAPELQKMKKCTSRTDVYAFGILLLEILIGKKPGKNGRSGASVDFPSMVNVAVLEETTMEIFDVEVLKGIKNPMEDGLIQALKLAMGCCAPVVTVRPSMNEVVKQLEENRPRNRSALYSPSETRSEIGTPF 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6608027 6610809 + Conep11aG0083500.1 Cone11ag0811 448063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0811 680 Pfam Protein tyrosine and serine/threonine kinase 384 655 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0811 680 SUPERFAMILY Protein kinase-like (PK-like) 385 660 IPR011009 -
Cone11ag0811 680 Gene3D Ribonuclease Inhibitor 42 204 IPR032675 -
Cone11ag0811 680 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 110 663 IPR052451 -
Cone11ag0811 680 MobiDBLite consensus disorder prediction 340 361 - -
Cone11ag0811 680 FunFam Leucine-rich repeat receptor-like protein kinase 207 299 - -
Cone11ag0811 680 Gene3D Phosphorylase Kinase; domain 1 367 456 - -
Cone11ag0811 680 ProSiteProfiles Protein kinase domain profile. 380 680 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0811 680 Pfam Leucine rich repeat 210 267 IPR001611 GO:0005515(InterPro)
Cone11ag0811 680 SUPERFAMILY L domain-like 56 274 - -
Cone11ag0811 680 Gene3D Ribonuclease Inhibitor 208 300 IPR032675 -
Cone11ag0811 680 Pfam Leucine Rich Repeat 157 179 IPR001611 GO:0005515(InterPro)
Cone11ag0811 680 Pfam Leucine Rich Repeat 134 153 IPR001611 GO:0005515(InterPro)
Cone11ag0811 680 Gene3D Transferase(Phosphotransferase) domain 1 457 673 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0811 Cone-Chr11:6608027 Cone5ag0167 Cone-Chr5:695792 1.06E-70 dispersed
Cone11ag0811 Cone-Chr11:6608027 Cone18ag0796 Cone-Chr18:4626967 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81894 PF04178 Got1 1.00E-13 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0811 - - - 0.0