Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0812 ATGGTGCCACGCCCTGATGATCAGAAATCAAAATTGTCAACTACGACGGAGGCAAAGGATGGTAAAAACAACATCGGAGCGCAGACATTCACATTCCGAGAATTGGCTACGGCTACAAAGAATTTCCGTATGGAATGTCTAATAGGTGAAGGTGGCTTTGGAAGAGTTTATAAGGGACGACTTGAGAAAGTTAAACAGGAAGTGGCTATAAAGCAACTCGACAGGAATGGATTACAAGGAAATAGAGAATTTCTTGTGGAGGTGTTAATGCTCAGCCTCTTGCACCATGAGAATCTAGTTAATCTTATTGGATATTGTGCAGATGGAGATCAGAGACTTTTGGTCTATGAATACATGCCACTTGGATCTCTTGAAGACCATCTTCTTGACCTTCCACCGGAGCAAAAGCCAATAGATTGGTTTATAAGAATGAAGATAGCATTAGGTGCAGCGAAGGGCTTAGAATATCTGCATGACAAGGCCAATCCTCCAGTAATCTATCGAGATTTAAAGTCTTCCAACATCTTGTTGGACAGAGATTTCAATGCAAAACTGTCCGATTTTGGACTCGCAAAACTGGGACCTGTTGGGGATAAAACACATGTATCGTCAAGGGTAATGGGAACTTATGGGTATTGTGCTCCCGAGTATCAAAGAACAGGCCAACTCACGGTCAAATCAGACGTATATAGCTTTGGAGTTGTTTTATTGGAGCTAATTACTGGGAAAAGAGCCATCGACACTACAAGACGTACTGAGGAGCAGAATCTTGTTACATGGGCACGCCCAGTATTCAAGGAGCCAAACAGATATCCGAATCTTGCAGATCCTCTTCTAAAAGGAGACTTTCCTATTAGATCTTTGAATCAAGCAGTGGCAGTTGCAGCCATGTGCCTTAATGAGGAACCGACAGTACGACCCCTAATAAGCGATGTGGTCACCGCTCTCAGTTTTCTTGGGATAGGAATCGATGCTGAAACAACATTAATCGATAGTGTTCATTCTTCACCGTCTGAAAATATTATGAATAATGCAAAAGGAACTCGTTGTCATGACGAAGAAGTAACAAGACAGCGACAACAAGCAGTAGCGGAAGCCATAGAATGGGGCTCATCATCAAGGAGCAACACCAATAATGGCTTCGAAGTGCTTCATACAAATTCATTGCACTAA 1173 42.46 MVPRPDDQKSKLSTTTEAKDGKNNIGAQTFTFRELATATKNFRMECLIGEGGFGRVYKGRLEKVKQEVAIKQLDRNGLQGNREFLVEVLMLSLLHHENLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLPPEQKPIDWFIRMKIALGAAKGLEYLHDKANPPVIYRDLKSSNILLDRDFNAKLSDFGLAKLGPVGDKTHVSSRVMGTYGYCAPEYQRTGQLTVKSDVYSFGVVLLELITGKRAIDTTRRTEEQNLVTWARPVFKEPNRYPNLADPLLKGDFPIRSLNQAVAVAAMCLNEEPTVRPLISDVVTALSFLGIGIDAETTLIDSVHSSPSENIMNNAKGTRCHDEEVTRQRQQAVAEAIEWGSSSRSNTNNGFEVLHTNSLH 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6623544 6625539 + Conep11aG0083600.1 Cone11ag0812 448064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0812 390 SMART serkin_6 42 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0812 390 Gene3D Phosphorylase Kinase; domain 1 12 118 - -
Cone11ag0812 390 FunFam Serine/threonine-protein kinase PBS1 119 332 - -
Cone11ag0812 390 PIRSF TyrPK_CSF1-R 39 131 - -
Cone11ag0812 390 PIRSF TyrPK_CSF1-R 284 383 - -
Cone11ag0812 390 PIRSF TyrPK_CSF1-R 134 243 - -
Cone11ag0812 390 MobiDBLite consensus disorder prediction 1 16 - -
Cone11ag0812 390 Gene3D Transferase(Phosphotransferase) domain 1 119 324 - -
Cone11ag0812 390 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524(InterPro)
Cone11ag0812 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0812 390 Pfam Protein kinase domain 46 313 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0812 390 MobiDBLite consensus disorder prediction 1 20 - -
Cone11ag0812 390 SUPERFAMILY Protein kinase-like (PK-like) 28 336 IPR011009 -
Cone11ag0812 390 CDD STKc_IRAK 48 316 - -
Cone11ag0812 390 FunFam Serine/threonine-protein kinase PBS1 14 118 - -
Cone11ag0812 390 ProSiteProfiles Protein kinase domain profile. 42 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0812 390 PANTHER OS07G0668900 PROTEIN 14 326 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0621 Cone-Chr10:2966987 Cone11ag0812 Cone-Chr11:6623544 2.24E-41 dispersed
Cone11ag0812 Cone-Chr11:6623544 Cone14ag0778 Cone-Chr14:4523716 6.19E-168 dispersed
Cone11ag0812 Cone-Chr11:6623544 Cone11ag0816 Cone-Chr11:6690935 9.80E-89 proximal
Cone11ag0812 Cone-Chr11:6623544 Cone18ag0817 Cone-Chr18:5195317 2.93E-88 wgd
Cone11ag0812 Cone-Chr11:6623544 Cone18ag0771 Cone-Chr18:4370225 6.90E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81895 PF04178 Got1 1.00E-13 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0812 - - - 0.0