Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone11ag0816 | ATGGTTTTTTGTCTTGAGTTCTGTTCGGAGAGAACAATGCCCTCTTTTATTCTACTTCTTCTTATTATTCTGGTCGATTTCCCCATCTCTTGCTCAGGGTTTTCACAATTACAAGTATACTTCTCTCCTTATGTACCGCCAAACCGGCTAACATCTATGAGGGAACTCTCAATGGAACAAGCTAGGTCAATTTTAATGATAGTTTCACATGCTCTGCCAAAACCTCATAGTAGACGAGTATTTAATCCTTCTCTAGAGGCATCTGCTACTCCTGCACCTTCTCCACATTCTCAAGGGCCTAGCAGCTCACCATTACCTAATCATCATTGGCATCATCGTCATGTTAGATCTCATTTGGTCGCTCCAACCCCTTCTAAAGACCAAGGATGTGATCAAATCTGTGTGGAGCCACTTACTGCAACTCCCTTTGGTTCGCCTTGTGGATGTGTGTTTCCCATGAAAGTCCAACTTCTTTTGGACGTAGCCCCTTTTTCTGTTTTTCCTGTAATGAATGAGCTTGAGATTGAGATTGCAGAGGGTACGTATTTGACGCAAAGTCAAGTGAAAATAATGGGTGCTAGTGCGGATACTCAAAATCAAGGGAAAACAGTGGTGGATGTTAACCTGGTACCCCTTGGAGAGAAGTTTGACAACACCACTGCAGTCTTAACTTCTGAAAGATTTTGGCATAAGAATGTGCCTCTTAATAGCACTCTTTTTGGTAGTTATGATGTGATGTATGTCAGATATCCAGGGCTTCCTTCTTCACCACCTTATGGGAGTTATGTGGGGAAGGGTCCAAGTGGAAGTCGAGAAGATCTTCCTATCTCTGCGAATTTCGTAAACAAGAGCAAGAGGATGAGTATTAGAACCATTGCCATCATTGCTTTGTCTGCATTTGTATTATTACTGGTTTTCCTCGGTGCTCTGTTTGTTTATGTAAAATGGAGGAAGTTTAGAAGGCCGTCAAGTGCTGTTGGTCCTGCCTTTACATCATCTATAAATAAAAGATCCGTCCTGTCAAGTTGCATGGCAAGCTCTACCTCAGTTTCCCTGATTTCCACCATGGCTACTTGCATTCCATCTGTCAAGACATTTACCTGCCCCGAACTTGTGAAAGCCACAGATAAGTTCAGCTCAAAGAGGCTTCTAGGAGAAGGGGGATTTGGGCGTGTTTATCATGGCATTGTAGAAAATGGAACTGAAGTTGCAGTTAAGTTGCTTACCAGGGATAATAATCAGAATGGTGACCGTGAATTTATTGCAGAAGTTGAGATGCTTAGTCGGTTACATCACCGTAATCTCGTGAAATTGATTGGTATATGCATTGAAGGACGTGTGCGCTGCTTAGTCTATGAGCTTGTTCACAATGGCAGTGTTGAGTCCCATTTGCATGGTGTTGACATGAAAAAGGGACCTCTTGACTGGGATGCACGGTTGAAAATTGCTCTCGGAGCAGCGAGAGGGTTGGCTTATCTTCATGAAGATTCTAACCCTCGAGTAATTCACCGTGATTTCAAGGCTAGTAATGTTTTATTGGAAGATGACTTCACCCCCAAAGTTTCAGATTTTGGATTGGCAAGGGAAGCAACTGAAGGAAGTGAACATATATCTACACGAGTTATGGGAACTTTTGGGTATGTAGCCCCTGAATATGCAATGACAGGACATCTACTTGTCAAAAGTGATGTTTACAGTTATGGTGTCGTTCTGCTTGAGCTTCTCTCTGGCAGGAAGCCTGTGGAAATGTCCCAACCTCAGGGACAGGAGAACCTAGTAACATGGGCACGAACCCTACTGACTAGTAGAGATGGTTTGGAGCAACTAATTGATCCTTCTTTGGCTGGAAGTTATGACTTTGATGACATGGCTAGCGTAGCAGCCATTGCTTCTATGTGTGTACACCCAGAGGTGACTCACAGGCCATTTATGGGAGAAGTTGTCCAGGCTCTTAAACTTATATATAACGACACGGACGAGGCATGTGGGGATTTTTGCAGCCCAAGGGAGTCCTCTGCTCAAGACTCGGACTTCAAAGGAGATCTGGTACCATCAGATAGCAGTTGGTGGAATGCTGGTGGGCTAACACCTCGATTGACTTATGGGCTGGCCTCTTCCTTCATTACGATGGAGTACAGCTCTGGCCCACTTGAAGAGATGGAAAATAGACACCATTCAACTTCAAGTTTAGTAGGGGATGAGGTATCTTTACCAGTCAGGCATGGGAACAGGTCTGGTCCCTTGAGAACAATTCGGAGCAAACCTGCTTTTTATAAATTGTCAGGTAGTAGGAGCGATCATGGTGGACTTCTTTCGAGAATTTGGAATGATGGGTACTGGGTTTAA | 2346 | 43.86 | MVFCLEFCSERTMPSFILLLLIILVDFPISCSGFSQLQVYFSPYVPPNRLTSMRELSMEQARSILMIVSHALPKPHSRRVFNPSLEASATPAPSPHSQGPSSSPLPNHHWHHRHVRSHLVAPTPSKDQGCDQICVEPLTATPFGSPCGCVFPMKVQLLLDVAPFSVFPVMNELEIEIAEGTYLTQSQVKIMGASADTQNQGKTVVDVNLVPLGEKFDNTTAVLTSERFWHKNVPLNSTLFGSYDVMYVRYPGLPSSPPYGSYVGKGPSGSREDLPISANFVNKSKRMSIRTIAIIALSAFVLLLVFLGALFVYVKWRKFRRPSSAVGPAFTSSINKRSVLSSCMASSTSVSLISTMATCIPSVKTFTCPELVKATDKFSSKRLLGEGGFGRVYHGIVENGTEVAVKLLTRDNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRVRCLVYELVHNGSVESHLHGVDMKKGPLDWDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVEMSQPQGQENLVTWARTLLTSRDGLEQLIDPSLAGSYDFDDMASVAAIASMCVHPEVTHRPFMGEVVQALKLIYNDTDEACGDFCSPRESSAQDSDFKGDLVPSDSSWWNAGGLTPRLTYGLASSFITMEYSSGPLEEMENRHHSTSSLVGDEVSLPVRHGNRSGPLRTIRSKPAFYKLSGSRSDHGGLLSRIWNDGYWV | 781 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6690935 | 6700314 | - | Conep11aG0084100.1 | Cone11ag0816 | 448068 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone11ag0816 | 781 | MobiDBLite | consensus disorder prediction | 85 | 105 | - | - | |
Cone11ag0816 | 781 | MobiDBLite | consensus disorder prediction | 722 | 745 | - | - | |
Cone11ag0816 | 781 | Gene3D | Transferase(Phosphotransferase) domain 1 | 455 | 667 | - | - | |
Cone11ag0816 | 781 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 501 | 513 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone11ag0816 | 781 | ProSiteProfiles | Protein kinase domain profile. | 378 | 654 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone11ag0816 | 781 | Gene3D | Phosphorylase Kinase; domain 1 | 350 | 454 | - | - | |
Cone11ag0816 | 781 | PANTHER | OS01G0750732 PROTEIN | 132 | 677 | IPR050885 | - | |
Cone11ag0816 | 781 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 455 | 669 | - | - | |
Cone11ag0816 | 781 | Pfam | Protein tyrosine and serine/threonine kinase | 381 | 595 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone11ag0816 | 781 | SUPERFAMILY | Protein kinase-like (PK-like) | 362 | 655 | IPR011009 | - | |
Cone11ag0816 | 781 | ProSitePatterns | Protein kinases ATP-binding region signature. | 384 | 406 | IPR017441 | GO:0005524(InterPro) | |
Cone11ag0816 | 781 | MobiDBLite | consensus disorder prediction | 85 | 108 | - | - | |
Cone11ag0816 | 781 | CDD | STKc_IRAK | 384 | 654 | - | - | |
Cone11ag0816 | 781 | FunFam | receptor-like serine/threonine-protein kinase ALE2 | 351 | 454 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0816 | Cone-Chr11:6690935 | Cone18ag0817 | Cone-Chr18:5195317 | 0 | dispersed | |
Cone18ag0160 | Cone-Chr18:838292 | Cone11ag0816 | Cone-Chr11:6690935 | 1.80E-38 | dispersed | |
Cone11ag0812 | Cone-Chr11:6623544 | Cone11ag0816 | Cone-Chr11:6690935 | 9.80E-89 | proximal | |
Cone11ag0816 | Cone-Chr11:6690935 | Cone18ag0752 | Cone-Chr18:4146543 | 2.51E-116 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81896 | PF01423 | LSM | 4.30E-17 | CL0527 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone11ag0816 | - | - | - | 0.0 |