Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0932 ATGGGTAACATGGACGATGCGTACCCCCGCCCGGGCACGGTGGAGTGTGCGCACAAGGTGGCGATTCCGCCACCACAACCGTTTGTGAAGTCATTTCAAAACTCTCTAAAGGAAACATTTTTCCCCGACGATCCATTAAGGCAATTCAAGAACCAACCATTATTGAAGAAGTTCAAATTAGGACTACAATACTTCTTTCCAATCATAGAATGGGGTCCTAGTTATAGCCTCGAGTTTTTGAAAGCCGACTTAATTTCCGGGATTACCATTGCCAGTCTGGCGATCCCTCAGGGTATCAGTTATGCCAAGCTAGCCAACTTGCCGCCAATTCTCGGCCTATATTCGAGCTTTATTCCCCCGATAGTTTATGCGTTCATGGGGAGCTCGAGAGATTTGGCAGTCGGCACAGTGGCGGTTGCTTCGCTTTTGACGGCTTCCATGTTGGGGGATGAAGTTAATGCAGCTGAGAACCCCAAGCTTTATCTTCACCTTGCTTTCACTGCAACATTCTTTGCAGGAGTTTTCCAAGCTTTATTGGGCTTATTAAGGCTAGGTTTTATCGTGGATTTTCTGTCACATGCAACAATAGTTGGGTTCATGGCTGGGGCAGCGACGGTGGTAATCTTACAGCAGCTCAAAGGGATTCTTGGTCTTGTCCACTTCACTCACGGCACTGATGTCATCTCCGTCGTTCGTTCCGTCTTCACCCAAACCCATCAGTGGAGATGGGAGAGCTGGCTCTTAGGCTGCGTTTTCCTTTTCTTTCTCCTCGCCACAAGATACTTTAGCAAGAAAAGGCCCAAGTTCTTTTGGGTATCGGCCCTTGCACCTTTGACTTGTGTTATTTTGGGAACCGTTTTCGCTTTTCTCACACAAGCTCAGAAAAATGGAGTTCAAGTGATAGGGGACCTGAAGAAAGGGCTTAATCCACCGTCCATCACAGATCTTGTCTTCGAGTCGCCTTACCTAACGGTTGCTCTTAAAACCGGCATCATCACAGGCGTTATAGCTCTTGCTGAAGGAATTGCAGTAGGAAGGAGTTTTGCCATGTTCAAAAACTACCACATTGATGGAAACAAAGAAATGGTGGCTATTGGAACAATGAATATTATCGGTTCTTTCACCTCATGTTACCTAACCACGGGCCCGTTTTCCCGATCAGCCGTGAACTACAATGCCGGATGCAAAACTGCAATCTCAAACATCGTCATGGCAATTGCTGTCATGTTAACATTGTTGTTCCTAACACCTTTGTTCCATTACACCCCCGCTGTGGTCTTGTCCTCTATCATCATCTCCGCTATGCTTGGGTTAATTGACTATGATGCAGCCATCCATCTATTCAAGGTTGACAAGTTTGACTTTGTAGTATGCATGAGCGCATACAGCGGGGTCGTTTTCGGAAGTGTGGAGATCGGGTTGGTAGTCGCGCTTGCAATTTCTGTGCTTCGAGTCCTTCTATTTGTGGCTAGGCCTAAGACTGTTGTGCTTGGGAATATCCCCAACTCTATGATATATAGAAGCGTCGAGCAATACCCGAATGCAAACAGCATCCCCGGAATTCTTATACTTGAGATCAATGCTCCTATTTACTTTGCCAATGCTAGTTACTTAAGAGAAAGGATTGCACGGTGGATCGACGAAGAAGAGGACCGGATAAAATCTTCAGGCGAAACTAGCTTACAATATGTCATATTGGACTTCAGTGCCGTTGGCAACATCGATACGAGCGGAATAAGCATGCTAGAAGAGGTTAGGAAGGTTGTTGATAGAAGAGGTTTAAAGCTTGCATTGGCTAATCCGGGAAGTGAGGTAATGAAGAAGCTTAACAAGTCGAAGCTCATCGACGAAATCGGACAAGAATGGATTTATCTTACAGTTGGAGAAGCCGTTGGAGCTTGTAATTACATGCTTCATACGTCCAAACCTGGGAAAGGCGAAGAAGAGGCATAA 1953 45.88 MGNMDDAYPRPGTVECAHKVAIPPPQPFVKSFQNSLKETFFPDDPLRQFKNQPLLKKFKLGLQYFFPIIEWGPSYSLEFLKADLISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPIVYAFMGSSRDLAVGTVAVASLLTASMLGDEVNAAENPKLYLHLAFTATFFAGVFQALLGLLRLGFIVDFLSHATIVGFMAGAATVVILQQLKGILGLVHFTHGTDVISVVRSVFTQTHQWRWESWLLGCVFLFFLLATRYFSKKRPKFFWVSALAPLTCVILGTVFAFLTQAQKNGVQVIGDLKKGLNPPSITDLVFESPYLTVALKTGIITGVIALAEGIAVGRSFAMFKNYHIDGNKEMVAIGTMNIIGSFTSCYLTTGPFSRSAVNYNAGCKTAISNIVMAIAVMLTLLFLTPLFHYTPAVVLSSIIISAMLGLIDYDAAIHLFKVDKFDFVVCMSAYSGVVFGSVEIGLVVALAISVLRVLLFVARPKTVVLGNIPNSMIYRSVEQYPNANSIPGILILEINAPIYFANASYLRERIARWIDEEEDRIKSSGETSLQYVILDFSAVGNIDTSGISMLEEVRKVVDRRGLKLALANPGSEVMKKLNKSKLIDEIGQEWIYLTVGEAVGACNYMLHTSKPGKGEEEA 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7614854 7620563 - Conep11aG0096400.1 Cone11ag0932 448184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0932 650 Pfam STAS domain 512 630 IPR002645 -
Cone11ag0932 650 CDD STAS_SulP_like_sulfate_transporter 512 627 - -
Cone11ag0932 650 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cone11ag0932 650 Pfam Sulfate permease family 80 460 IPR011547 GO:0016020(InterPro)
Cone11ag0932 650 Gene3D STAS domain 491 636 IPR036513 -
Cone11ag0932 650 SUPERFAMILY SpoIIaa-like 514 634 IPR036513 -
Cone11ag0932 650 PANTHER SULFATE TRANSPORTER 55 634 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone11ag0932 650 FunFam Sulfate transporter 31 491 637 - -
Cone11ag0932 650 ProSiteProfiles STAS domain profile. 511 634 IPR002645 -
Cone11ag0932 650 NCBIfam sulfate permease 67 630 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0932 Cone-Chr11:7614854 Cone20ag1225 Cone-Chr20:8126898 7.54E-255 dispersed
Cone11ag0932 Cone-Chr11:7614854 Cone18ag0634 Cone-Chr18:3289773 0 wgd
Cone11ag0932 Cone-Chr11:7614854 Cone4ag0266 Cone-Chr4:1188017 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0932 K17471 - rcu:8275411 1069.3