Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0941 ATGGAAAAGAAGAAGTATCCTGTAGGAGCAGAGCGTTATACTCTGCATGAAGAGATCGGGCAGGGCGTGAGTGGCTCGGTGCACCGAGCTCTCTGTAAACCTTACAATGAGATAGTCGCCATCAAAATCCTTGATTTGGAGCGTGCTGATTGTGATCTGTATAACATTTCTCGAGAAGCACAAACGATGATCTTGGTTGACCATCCTAATGTGCTTAGATGCCACTGTTCCTTTGTTAGTGACCATAGTCTGTGGATCGTTATGCCCTACATGTCTGGAGGCTCAAGTCTACACATTTTAAAAGCCGCATACCCAACTGGTTTTGGTGAGGTAGTTATAGCAACAATATTGAAGGAGGTATTAAAGGGTTTAGAGTATCTTCACAATCAGGGACACATACATCGGGATGTCAAAGCCGGGAATATACTCATGAGCTCCCGTGGTACAATCAAGCTGGGGGATTTTGGGGTTTCTTGTTGCCTTTTTGATTCGTGTGACAGGCATCGCATGAGGAATACATTCGTGGGGACACCTTGCTGGATGGCACCTGAGGTTATGGAGCAGCTACATGGTTATGATTTCAAAGCGGACATTTGGTCTTTTGGAATAACTGCTTTAGAGCTCGCCCGTGGCAATGCTCCTTTCTCACAGTATCCCCCAATGAAGGTGCTTCTGATGACACTACAGAATGCTCCTCCAGGTCTTGATTATGAAAGGGATCGGAAATTTTCGAAGCATTTTAAGCAGATGATTGCTATTTGCTTGGTAAAAGACCCTCTAAAACGCCCTTCTGCAAAGAAATTGCTAAAGCATCCTTTCTTCAAGCAAGCCAAGTCAAATGATTATATTGTGCGTACCCTTTTGGAGGGTCTGCCAAATCTTGGGGATCGCATTAAGGCATTGAAGAAAAAGGAGGAAGATATGGTAGCACAGAAGAAAATGCCCGATGGGGAGAAGGAGGAAATATCACAGAATGAATATAAACGAGGAATTAGTGAGTGGAACTTCGATCTTGAAGATGTAAAGGCTCAGGCATCGCTGATCCAAGATAATGATGACACGATATCTTGCTCAAATTCCTTTATTTCGCTTGTTGTGGAAGAAAAAAATTCACAATGTCAAAGCTCCTCTCAAGCTTCAGATTCGGAGTGGAATGATGTGATGCAGAATCAAGCAGTTCCTCTTCGCTCAGTTGACTCGACGTCTAATGATATGAAGTCATGTCATGAGGACCGTACTATGCATAATTCTTCACCCCAGCATGATGCTCGGGATGGAAATAGTTCATCTGAAATACTGGAATTGGAGTTCAGTGGAAGAACTTTAGAGCGTGCAGCCAGTTCTTGTCATCATAAAAAAAATGTTTCAGCCGGAGGCATGTTACTAGAAGTTTCTGTTTCACCTACTAAAAGAGAGAGAGATAAGTTGCAAAATCAGCTGCAGAACATCCCAAATTGCAGTTCTTTTACTCTTCCGCCCGCACTGGATGATATGCCTTCTGAAGTTTCTTCTTCAAATAGTGATGAACTTGATGAGAAGGTAAGGCCAACAGTTGTGCAACAGAAAGGGCGTTTCAAAGTTACATCTGAGAATGTTAGCATAGAAAAGGTTGCCCCTCCTCCTATACGGCTAAAGAGTCGGAGCATGCAGGTGATAACCACTCCGTATTCTGCAATTTCGAATTCATCAAATCCACTTCTCTCACCTCTACCTTCACCATCTGCCAGAACATCAATTCTTTCTGGACCTTCTTCTTTTCACCTGTTGCATTCTATTTTGCAGTCAAATATTATTCAGGGGGAGAATATTTTAAGCATGATGAAGAATGTTACTACTCTGGGCGACTCTGCCGTGAAAGCGGGATGTTCGGCATTTCATGTTGCAGTGGTGGAGAAATCTTTGCTTGAAGCGGGTCATGAGCGGGAGACACAATTACTTAAAGAAATAACCGATTTGCAGTTGAGGCTCATAAGTGCCCAAGATGAGCTTCGAAAGTTAAGAACAGAAAACACTTAA 2016 43.06 MEKKKYPVGAERYTLHEEIGQGVSGSVHRALCKPYNEIVAIKILDLERADCDLYNISREAQTMILVDHPNVLRCHCSFVSDHSLWIVMPYMSGGSSLHILKAAYPTGFGEVVIATILKEVLKGLEYLHNQGHIHRDVKAGNILMSSRGTIKLGDFGVSCCLFDSCDRHRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELARGNAPFSQYPPMKVLLMTLQNAPPGLDYERDRKFSKHFKQMIAICLVKDPLKRPSAKKLLKHPFFKQAKSNDYIVRTLLEGLPNLGDRIKALKKKEEDMVAQKKMPDGEKEEISQNEYKRGISEWNFDLEDVKAQASLIQDNDDTISCSNSFISLVVEEKNSQCQSSSQASDSEWNDVMQNQAVPLRSVDSTSNDMKSCHEDRTMHNSSPQHDARDGNSSSEILELEFSGRTLERAASSCHHKKNVSAGGMLLEVSVSPTKRERDKLQNQLQNIPNCSSFTLPPALDDMPSEVSSSNSDELDEKVRPTVVQQKGRFKVTSENVSIEKVAPPPIRLKSRSMQVITTPYSAISNSSNPLLSPLPSPSARTSILSGPSSFHLLHSILQSNIIQGENILSMMKNVTTLGDSAVKAGCSAFHVAVVEKSLLEAGHERETQLLKEITDLQLRLISAQDELRKLRTENT 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7685584 7690482 + Conep11aG0097300.1 Cone11ag0941 448193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0941 671 FunFam serine/threonine-protein kinase BLUS1 isoform X1 94 327 - -
Cone11ag0941 671 Coils Coil 649 669 - -
Cone11ag0941 671 Gene3D Transferase(Phosphotransferase) domain 1 94 329 - -
Cone11ag0941 671 SMART serkin_6 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0941 671 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0941 671 Pfam Protein kinase domain 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0941 671 CDD STKc_OSR1_SPAK 13 274 - -
Cone11ag0941 671 MobiDBLite consensus disorder prediction 393 429 - -
Cone11ag0941 671 MobiDBLite consensus disorder prediction 403 419 - -
Cone11ag0941 671 SUPERFAMILY Protein kinase-like (PK-like) 11 275 IPR011009 -
Cone11ag0941 671 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 671 IPR047173 GO:0043539(InterPro)
Cone11ag0941 671 FunFam Serine/threonine-protein kinase BLUS1 2 90 - -
Cone11ag0941 671 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524(InterPro)
Cone11ag0941 671 MobiDBLite consensus disorder prediction 494 514 - -
Cone11ag0941 671 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0941 Cone-Chr11:7685584 Cone17ag0279 Cone-Chr17:1338830 2.23E-243 dispersed
Cone11ag0941 Cone-Chr11:7685584 Cone18ag0623 Cone-Chr18:3194144 0 wgd
Cone11ag0941 Cone-Chr11:7685584 Cone20ag1129 Cone-Chr20:7711788 2.85E-248 wgd
Cone11ag0941 Cone-Chr11:7685584 Cone4ag0285 Cone-Chr4:1311433 1.83E-21 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81899 PF01095 Pectinesterase 2.50E-58 CL0268 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0941 K08835 - cit:102627630 811.601