Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0944 ATGATAATTAACGTGAAGGAATCGACGATGGTGAAGCCATCAGGAGAGACACCGAAGCGGAGCTTGTGGAATTCGAACGTGGATATAGTAGTGCCGAGCATGCATACTCCAAGTGTATATTTCTACTGTCCCACTGGTTCGCCCAATTTCTTTGATTCTAGAATTCTTAAGGAGGCGCTTAGTAAGGCTCTGGTGCCGTTTTACCCCATGGCTGGTCGATTGAAGAGAGATGAAGACGGTCGAATTGAGATTGATTGTAATGCAGAAGGAGTGCTGTTTGTTGAAGCTGAGACCAGTGCGGCTGTTGATGATTTTGGCGATTTTGCGCCTACTTTGAAGCTCAGGCAGCTGATTCCTACTGTGGATTATTCTCGTGGGATCGAGTCATATCCTCTCTTGATCTTGCAGGTTACTTACTTTAAATGTGGTGGGGTCTCACTTGGTGTTGGAATGCAACACCATGCAGCAGATGGATTCTCCGGTCTCCATTTCATAAACACATGGTCCGATATGGCTCGTGGGCTCGACCTAACAATACCTCCTTTCATCGACAGGACTCTCCTCCGAGCCCAGGACCCACCTCAACCTTCATTCGAACACATTGAATATCAACCAGCCCCCACCATGAATGCCCCCCTACAAGGATCAAATCCAGAGGACACAACAGTATCCATATTTAAAATGACCCGAGACCAGCTCAACATCTTAAAGGCCAAGTCCAGGGAAAACGGCAACACAATAAACTACAGCTCATATGAGATGTTATCGGGCCATGTGTGGAGATGCGTATGCAAGGCCCGTGGGCTTCCGGACGATCAAGTAACAAAGTTGTACATCGCGACGGATGGACGGTCCAGATTGCGTCCTCCTCTCCCGCCCGGTTACTTTGGCAATGTGATCTTCACCACCACACCTATAGCATTAGCAGGTGATTTGCAGTCAAAACCTACATGGTATGCTGCAAGTAGGATCCATGATGCATTGAAGAGGATGGATGACAAGTACTTGAAATCGGCCCTCGAATATCTAGAGCTACAGCCTGATCTCTCGGCTCTTGTTCGTGGTGCCCATACTTTCAGGTGTCCGAACCTTGGGATTACTAGCTGGGTTAGGCTGCCCATCCATGATGCTGATTTTGGGTGGGGCCGGCCGATTTTTATGGGACCCGGTGGGATTGCTTATGAGGGTCTATCGTTTATGATACCTAGTCCTACTGATGATGGGAGCTTGTCTGTGGCCCTTTGCCTGCAAACTCAACATATGAAAGTGTTCGAGAAATTATTGTATGAAATCTAA 1296 47.76 MIINVKESTMVKPSGETPKRSLWNSNVDIVVPSMHTPSVYFYCPTGSPNFFDSRILKEALSKALVPFYPMAGRLKRDEDGRIEIDCNAEGVLFVEAETSAAVDDFGDFAPTLKLRQLIPTVDYSRGIESYPLLILQVTYFKCGGVSLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIPPFIDRTLLRAQDPPQPSFEHIEYQPAPTMNAPLQGSNPEDTTVSIFKMTRDQLNILKAKSRENGNTINYSSYEMLSGHVWRCVCKARGLPDDQVTKLYIATDGRSRLRPPLPPGYFGNVIFTTTPIALAGDLQSKPTWYAASRIHDALKRMDDKYLKSALEYLELQPDLSALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFMIPSPTDDGSLSVALCLQTQHMKVFEKLLYEI 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7705382 7708332 - Conep11aG0097600.1 Cone11ag0944 448196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0944 431 Gene3D - 1 205 IPR023213 -
Cone11ag0944 431 SUPERFAMILY CoA-dependent acyltransferases 199 380 - -
Cone11ag0944 431 Gene3D - 212 431 IPR023213 -
Cone11ag0944 431 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Cone11ag0944 431 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 422 IPR050317 GO:0016747(PANTHER)
Cone11ag0944 431 FunFam Tryptamine hydroxycinnamoyl transferase 208 429 - -
Cone11ag0944 431 Pfam Transferase family 3 427 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0944 Cone-Chr11:7705382 Cone18ag0631 Cone-Chr18:3256509 3.64E-289 dispersed
Cone16ag0306 Cone-Chr16:3546339 Cone11ag0944 Cone-Chr11:7705382 4.64E-106 transposed
Cone11ag0944 Cone-Chr11:7705382 Cone18ag0620 Cone-Chr18:3179951 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0944 K13065 - cit:102624577 741.88