Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0946 ATGGCAAATCTCAAAGAGAGCCTTCTCCCTCCAAGACCCGCCTCTGCTGTAAACCTTAGGGAAGCTTCTTATCGACCATCTGCCTTTGGAAGACAGCCTTTTCAAGGTGTGGATGTTATGGGCCTCAAAAAGCGAGGCCAAGGGCTTCGTTCTTGGATCCGGGTCGACCCATTAGGGAACTCTCAGGTCATTGAAGTCGACAAGTTCACCATCATGCGCCGTTGTGATCTACCTGCTCGTGATCTACGCTTACTTGACCCTCTATTTGTCTACCCTTCAACAATACTTGGTAGAGAGAAGGCCATCGTTGTTAATTTAGAGCAGATTCGGTGTATTATAACTTCTGATGAGGTTTTGCTGTTGAATTCACTTGGTAGTTACGTGTTGCAGTATGTGGTAGAGTTAGAACAGAGACTTGCGGCTACTCGGGTTAATGAGGTTTGGCAATCCGGACGAGCTGATGTGGATATGAGGAAGAGTAGGGATCTTGATAATGTGTTTAATAGTTCATCTCCAGATTATTTGCCCTTTGAGTTTAGGGCCTTGGAAGTTGCTCTGGAGGTCGCTTGTACATTCCTTGATTCTCAGGCATCAGAATTAGAAATTGAAGCATATCCAGCACTAGACGAACTCACATCAAAGATAAGCACACTAAACCTGGAACGAGTTCGTAGATTAAAAAGCAGACTTGTTGCCTTAACTCGGAGAGTCCAGAAGGTGAGGGATGAAATAGAGCAGCTCATGGATGATGATGGAGACATGGCGGAAATGTATCTGACAGAGAAGAAAATGCGGGTAGAATCACCGATCTACGGCGATCAGTCCATGAGTGGCTACAGATCGACCGAGGGTGGGCCTGTTTCTGCTCCAGTTTCTCCCGTGTCTTCACCTGCTACTGCTAGGAGGCTTGAGAAAAGCTTTAGTATGGCTCGAAGTCGACATAGCACAAGGAGTTCCGAAAGTAATACAGAAAGCATTGAACAACTTGAAATGTTGCTCGAAGCATATTTTGTTGTCATTGATAGCACCCTAAACAAGCTCACATCGTTGAAGGAGTACATTGATGATACGGAAGATTTCATCAACATTCAGTTGGATAATGTACGGAATCAGCTGATCCAGTATGAGCTACTACTGACTACTGCAACATTTGTAGTTGCGATATTCGGGGTGGTGGCTGGGATTTTCGGAATGAATTTTTCAATATCCTTATTTGACTACCCATCTGCTTTTAATTGGGTCCTTATAATTACAGGAGCAAGTTGTTTTGTCATATTTTTTGCATTTGTTTGGTTTTTCAGACATAGAAGACTCATGCCACTGTAG 1326 43.97 MANLKESLLPPRPASAVNLREASYRPSAFGRQPFQGVDVMGLKKRGQGLRSWIRVDPLGNSQVIEVDKFTIMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITSDEVLLLNSLGSYVLQYVVELEQRLAATRVNEVWQSGRADVDMRKSRDLDNVFNSSSPDYLPFEFRALEVALEVACTFLDSQASELEIEAYPALDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKMRVESPIYGDQSMSGYRSTEGGPVSAPVSPVSSPATARRLEKSFSMARSRHSTRSSESNTESIEQLEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQYELLLTTATFVVAIFGVVAGIFGMNFSISLFDYPSAFNWVLIITGASCFVIFFAFVWFFRHRRLMPL 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7720456 7722505 + Conep11aG0097800.1 Cone11ag0946 448198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0946 441 MobiDBLite consensus disorder prediction 278 302 - -
Cone11ag0946 441 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 378 431 IPR045863 -
Cone11ag0946 441 CDD Mrs2_Mfm1p-like 52 438 IPR039204 -
Cone11ag0946 441 Pfam Magnesium transporter MRS2-like 64 264 - -
Cone11ag0946 441 Pfam Magnesium transporter MRS2-like 320 369 - -
Cone11ag0946 441 Gene3D Magnesium transport protein CorA, transmembrane region 130 372 - -
Cone11ag0946 441 Gene3D - 38 123 - -
Cone11ag0946 441 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 38 438 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cone11ag0946 441 FunFam Magnesium transporter MRS2-1 40 123 - -
Cone11ag0946 441 MobiDBLite consensus disorder prediction 278 322 - -
Cone11ag0946 441 Gene3D Magnesium transport protein CorA, transmembrane region 379 439 - -
Cone11ag0946 441 FunFam Magnesium transporter MRS2-1 379 439 - -
Cone11ag0946 441 Coils Coil 223 250 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0946 Cone-Chr11:7720456 Cone17ag0276 Cone-Chr17:1309074 3.23E-242 dispersed
Cone9ag0537 Cone-Chr9:2568874 Cone11ag0946 Cone-Chr11:7720456 4.83E-137 transposed
Cone11ag0946 Cone-Chr11:7720456 Cone20ag1134 Cone-Chr20:7734583 1.22E-193 wgd
Cone11ag0946 Cone-Chr11:7720456 Cone4ag0290 Cone-Chr4:1342275 7.19E-18 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0946 K16075 - cit:102622939 681.404