Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone11ag0950 | ATGGCTTATTCTTCATGGGTAGATACTTCATTAGATCTCAACCTCAATCCTCTCCGATACGTTAACGACGTCATTCCGCCAAAGGAGGTGGAAAGCAAATCTCTACATTTTGAGAGGAAAATTTCAGTGAAAGACGAGAGTTATGCGTTGGAGGAGGAATTGAAGAGGGTGAATGAGGAAAACAAGAGGCTGACGGAAATGCTAACGGTGATGTGCGAAAAGTACAACGCTTTGAGGAATCATTTGATGAACTACATGAACAAAAATCCTGAGCAGAAGGAGCTTATAGTAAGCTCAGCAAAGAAAAGAAAATCGGAAAGCAGCAATAATGATAGTATTAGTAATCATGTCGTAGGAATTATCAATAGTAATGGTAATTCGGAGAACAGCTCGACTGATCAGGAAGATACATGCAAGAAATTACAAAGAGAAGAAAGCATTAAAGCCAAAATCACTAGAGCTTACGTTCGGATCGAACCGTCCGATACTACCCTTGTGGTGAAAGATGGATATCAATGGAGGAAATATGGGCAGAAGGTGACTAGAGATAATCCTTGTCCTAGAGCTTATTTCAAGTGCTCTTTTGCTCCAAGCTGCCCTGTGAAAAGGAAGGTGCAAAAAAGTGTAGAAGATCAATGCGTTTTAGTTGCAACTTATGAAGGCGAACACAATCATCCACCTCCATCTCAGCTTGACCATCAAGCGAATACAAGCTCAACTAGGAGTAGTACCACGACACTTAGCGGCTCGATTAATCCCTTTTCGACCTCTGTAAACGGTGGATCATCGACACCATCAAATATAACTCTTGATTTGATAAAGTCAAAATCAAATCCGAGTGTCGAAAATACGCCTGAGGTGCATAAGTTTCTGGTAGAACAAATGGCTTCATCATTGACGAAAGATTCGAAGTTCACGGCGGCTTTGGCTGCTGCTATTTCCGGACGAATATTTACGCAATAA | 963 | 41.23 | MAYSSWVDTSLDLNLNPLRYVNDVIPPKEVESKSLHFERKISVKDESYALEEELKRVNEENKRLTEMLTVMCEKYNALRNHLMNYMNKNPEQKELIVSSAKKRKSESSNNDSISNHVVGIINSNGNSENSSTDQEDTCKKLQREESIKAKITRAYVRIEPSDTTLVVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKRKVQKSVEDQCVLVATYEGEHNHPPPSQLDHQANTSSTRSSTTTLSGSINPFSTSVNGGSSTPSNITLDLIKSKSNPSVENTPEVHKFLVEQMASSLTKDSKFTAALAAAISGRIFTQ | 320 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7747844 | 7749235 | - | Conep11aG0098200.1 | Cone11ag0950 | 448202 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone11ag0950 | 320 | MobiDBLite | consensus disorder prediction | 229 | 263 | - | - | |
Cone11ag0950 | 320 | FunFam | WRKY transcription factor 40 | 152 | 229 | - | - | |
Cone11ag0950 | 320 | Coils | Coil | 47 | 74 | - | - | |
Cone11ag0950 | 320 | Gene3D | WRKY domain | 151 | 229 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone11ag0950 | 320 | Pfam | WRKY DNA -binding domain | 168 | 226 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone11ag0950 | 320 | SMART | WRKY_cls | 167 | 227 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone11ag0950 | 320 | ProSiteProfiles | WRKY domain profile. | 162 | 228 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone11ag0950 | 320 | SUPERFAMILY | WRKY DNA-binding domain | 163 | 228 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone11ag0950 | 320 | MobiDBLite | consensus disorder prediction | 220 | 263 | - | - | |
Cone11ag0950 | 320 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 40 | 315 | IPR044810 | GO:0003700(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0950 | Cone-Chr11:7747844 | Cone17ag0272 | Cone-Chr17:1288799 | 8.86E-87 | dispersed | |
Cone11ag0950 | Cone-Chr11:7747844 | Cone18ag0617 | Cone-Chr18:3133849 | 1.10E-173 | wgd | |
Cone11ag0950 | Cone-Chr11:7747844 | Cone20ag1141 | Cone-Chr20:7768393 | 6.28E-87 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44354 | PF00400 | WD40 | 2.30E-05 | CL0186 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone11ag0950 | - | - | - | 0.0 |