Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone11ag0951 | ATGGACGATGAAACAGAGCAGAAAAACGAAGACACAAACTATCAAACCCGAAGCATCCTCCTCGGAAAATATGAGATGGGGAGATTACTGGGCCAAGGAACGTTCGCGAAAGTCTACTGCGGCAAGAACATAACCACCCACAAAAGCGTCGCCATTAAAGTGATCAACAAAGATCAGGTGAAGAAAGAAGGATTAATGGAGCAAATCAAGCGGGAAATCTCCGTCATGCGATTGGTCCATCATCCAAACATCGTGGAGCTGAAAGAAGTCATGGCCACAAAGAGCAAAATCCTCTTCATCATGGAATACATTAATGGAGGCGAACTGTTCGACAAAATTAGCAGGAGAAAAAAACTCGAGGTAGAAACAGCAAGGAAGTACTTCCGACAATTAATCAGCGCCGTCGAGTTCTGCCATAGCAGAGGCGTCTCCCACCGCGATTTAAAACCTGAAAACCTCCTCCTCGACCTGAACGGAGACCTTAAAGTCTCCGATTTCGGCTTATCGGCCTTACCGGAAAGCTTAAGGACTGACGGTTTGCTTCATACACAGTGTGGGACCCCTGCTTATGTTGCTCCTGAGATATTAAGGAAAAAAGGTTATGATGGAGCTAAGGCTGATATATGGTCTTGTGGGGTTATACTATTCGTTTTGCTTTCCGGCTATTTACCCTTTCGGGCCGATAATATCATGAAGATGTATCGGAAGGTTTTCAAGGCAGAGTATGAATTTCCTCCATGGCTTTCTTATGATGCAAAGAGCTTGATCTCTAAGCTGCTAGTTGTTGATCCTGATAAACGAATTTCGATCTCAGATATAATGAAGAGTCATTGGTTTCAACATGGGGTTATTAGTAGTAGTACTAATAATCCGAATCAAGAAGTAGTAAACGGAGAAATAAGTAATAATGAAGATGTGGAATTGGTCATGAAATCATCATCAGCACCATTTTATAATGCGTTTGAGTTCATAGCTTCAATGTCAACTGGATTTGACTTGTCTAGCTTGTTTGAGAGTACGAAGAAACGCGGGTCAACTTTTACGTCAAAGTGTTCGGCTTTGACTGTTTTGACAAAGCTTAAGGGCATGGGGAAGAAGCTTGGTTTGACGGTGTGTAGTTTGAAAGATTATAAGGTGAAGATGGTGGGGAAATATGAAGGGAGGAAAGGCAAACTGGAGGTGGCAGTTGAGGTGTTTGAAGTGGCGGCAGAAGTGGCGGTGGTGGAGTTTTCTAAGGTGGCCGGAGATACTATGGAGTATGTTAAGTTTTGTGAGGAGGATGTTAGGCCTGCACTTAAGGATATTGTTTGGAGTTGGCAAGGCGAAATTCATGGTTGTTCGTAA | 1344 | 43.23 | MDDETEQKNEDTNYQTRSILLGKYEMGRLLGQGTFAKVYCGKNITTHKSVAIKVINKDQVKKEGLMEQIKREISVMRLVHHPNIVELKEVMATKSKILFIMEYINGGELFDKISRRKKLEVETARKYFRQLISAVEFCHSRGVSHRDLKPENLLLDLNGDLKVSDFGLSALPESLRTDGLLHTQCGTPAYVAPEILRKKGYDGAKADIWSCGVILFVLLSGYLPFRADNIMKMYRKVFKAEYEFPPWLSYDAKSLISKLLVVDPDKRISISDIMKSHWFQHGVISSSTNNPNQEVVNGEISNNEDVELVMKSSSAPFYNAFEFIASMSTGFDLSSLFESTKKRGSTFTSKCSALTVLTKLKGMGKKLGLTVCSLKDYKVKMVGKYEGRKGKLEVAVEVFEVAAEVAVVEFSKVAGDTMEYVKFCEEDVRPALKDIVWSWQGEIHGCS | 447 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7758593 | 7760218 | + | Conep11aG0098300.1 | Cone11ag0951 | 448203 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone11ag0951 | 447 | ProSiteProfiles | NAF domain profile. | 313 | 338 | IPR018451 | GO:0007165(InterPro) | |
Cone11ag0951 | 447 | SUPERFAMILY | Protein kinase-like (PK-like) | 20 | 316 | IPR011009 | - | |
Cone11ag0951 | 447 | FunFam | Non-specific serine/threonine protein kinase | 15 | 103 | - | - | |
Cone11ag0951 | 447 | ProSiteProfiles | Protein kinase domain profile. | 24 | 279 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone11ag0951 | 447 | Pfam | NAF domain | 317 | 371 | IPR004041 | GO:0007165(InterPro) | |
Cone11ag0951 | 447 | Gene3D | Phosphorylase Kinase; domain 1 | 15 | 103 | - | - | |
Cone11ag0951 | 447 | Pfam | Protein kinase domain | 24 | 279 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone11ag0951 | 447 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 9 | 428 | - | GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) | |
Cone11ag0951 | 447 | Gene3D | Transferase(Phosphotransferase) domain 1 | 104 | 284 | - | - | |
Cone11ag0951 | 447 | SMART | serkin_6 | 24 | 279 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone11ag0951 | 447 | FunFam | Non-specific serine/threonine protein kinase | 313 | 437 | - | - | |
Cone11ag0951 | 447 | FunFam | Non-specific serine/threonine protein kinase | 17 | 315 | - | - | |
Cone11ag0951 | 447 | CDD | CIPK_C | 319 | 433 | - | - | |
Cone11ag0951 | 447 | Gene3D | Kinase associated domain 1, KA1 | 313 | 438 | - | - | |
Cone11ag0951 | 447 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 143 | 155 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone11ag0951 | 447 | ProSitePatterns | Protein kinases ATP-binding region signature. | 30 | 53 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0951 | Cone-Chr11:7758593 | Cone17ag0986 | Cone-Chr17:7606899 | 1.60E-199 | dispersed | |
Cone11ag0951 | Cone-Chr11:7758593 | Cone18ag0616 | Cone-Chr18:3122230 | 9.80E-283 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81900 | PF00400 | WD40 | 1.80E-05 | CL0186 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone11ag0951 | - | - | - | 0.0 |