Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0951 ATGGACGATGAAACAGAGCAGAAAAACGAAGACACAAACTATCAAACCCGAAGCATCCTCCTCGGAAAATATGAGATGGGGAGATTACTGGGCCAAGGAACGTTCGCGAAAGTCTACTGCGGCAAGAACATAACCACCCACAAAAGCGTCGCCATTAAAGTGATCAACAAAGATCAGGTGAAGAAAGAAGGATTAATGGAGCAAATCAAGCGGGAAATCTCCGTCATGCGATTGGTCCATCATCCAAACATCGTGGAGCTGAAAGAAGTCATGGCCACAAAGAGCAAAATCCTCTTCATCATGGAATACATTAATGGAGGCGAACTGTTCGACAAAATTAGCAGGAGAAAAAAACTCGAGGTAGAAACAGCAAGGAAGTACTTCCGACAATTAATCAGCGCCGTCGAGTTCTGCCATAGCAGAGGCGTCTCCCACCGCGATTTAAAACCTGAAAACCTCCTCCTCGACCTGAACGGAGACCTTAAAGTCTCCGATTTCGGCTTATCGGCCTTACCGGAAAGCTTAAGGACTGACGGTTTGCTTCATACACAGTGTGGGACCCCTGCTTATGTTGCTCCTGAGATATTAAGGAAAAAAGGTTATGATGGAGCTAAGGCTGATATATGGTCTTGTGGGGTTATACTATTCGTTTTGCTTTCCGGCTATTTACCCTTTCGGGCCGATAATATCATGAAGATGTATCGGAAGGTTTTCAAGGCAGAGTATGAATTTCCTCCATGGCTTTCTTATGATGCAAAGAGCTTGATCTCTAAGCTGCTAGTTGTTGATCCTGATAAACGAATTTCGATCTCAGATATAATGAAGAGTCATTGGTTTCAACATGGGGTTATTAGTAGTAGTACTAATAATCCGAATCAAGAAGTAGTAAACGGAGAAATAAGTAATAATGAAGATGTGGAATTGGTCATGAAATCATCATCAGCACCATTTTATAATGCGTTTGAGTTCATAGCTTCAATGTCAACTGGATTTGACTTGTCTAGCTTGTTTGAGAGTACGAAGAAACGCGGGTCAACTTTTACGTCAAAGTGTTCGGCTTTGACTGTTTTGACAAAGCTTAAGGGCATGGGGAAGAAGCTTGGTTTGACGGTGTGTAGTTTGAAAGATTATAAGGTGAAGATGGTGGGGAAATATGAAGGGAGGAAAGGCAAACTGGAGGTGGCAGTTGAGGTGTTTGAAGTGGCGGCAGAAGTGGCGGTGGTGGAGTTTTCTAAGGTGGCCGGAGATACTATGGAGTATGTTAAGTTTTGTGAGGAGGATGTTAGGCCTGCACTTAAGGATATTGTTTGGAGTTGGCAAGGCGAAATTCATGGTTGTTCGTAA 1344 43.23 MDDETEQKNEDTNYQTRSILLGKYEMGRLLGQGTFAKVYCGKNITTHKSVAIKVINKDQVKKEGLMEQIKREISVMRLVHHPNIVELKEVMATKSKILFIMEYINGGELFDKISRRKKLEVETARKYFRQLISAVEFCHSRGVSHRDLKPENLLLDLNGDLKVSDFGLSALPESLRTDGLLHTQCGTPAYVAPEILRKKGYDGAKADIWSCGVILFVLLSGYLPFRADNIMKMYRKVFKAEYEFPPWLSYDAKSLISKLLVVDPDKRISISDIMKSHWFQHGVISSSTNNPNQEVVNGEISNNEDVELVMKSSSAPFYNAFEFIASMSTGFDLSSLFESTKKRGSTFTSKCSALTVLTKLKGMGKKLGLTVCSLKDYKVKMVGKYEGRKGKLEVAVEVFEVAAEVAVVEFSKVAGDTMEYVKFCEEDVRPALKDIVWSWQGEIHGCS 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7758593 7760218 + Conep11aG0098300.1 Cone11ag0951 448203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0951 447 ProSiteProfiles NAF domain profile. 313 338 IPR018451 GO:0007165(InterPro)
Cone11ag0951 447 SUPERFAMILY Protein kinase-like (PK-like) 20 316 IPR011009 -
Cone11ag0951 447 FunFam Non-specific serine/threonine protein kinase 15 103 - -
Cone11ag0951 447 ProSiteProfiles Protein kinase domain profile. 24 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0951 447 Pfam NAF domain 317 371 IPR004041 GO:0007165(InterPro)
Cone11ag0951 447 Gene3D Phosphorylase Kinase; domain 1 15 103 - -
Cone11ag0951 447 Pfam Protein kinase domain 24 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0951 447 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 428 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Cone11ag0951 447 Gene3D Transferase(Phosphotransferase) domain 1 104 284 - -
Cone11ag0951 447 SMART serkin_6 24 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag0951 447 FunFam Non-specific serine/threonine protein kinase 313 437 - -
Cone11ag0951 447 FunFam Non-specific serine/threonine protein kinase 17 315 - -
Cone11ag0951 447 CDD CIPK_C 319 433 - -
Cone11ag0951 447 Gene3D Kinase associated domain 1, KA1 313 438 - -
Cone11ag0951 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag0951 447 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0951 Cone-Chr11:7758593 Cone17ag0986 Cone-Chr17:7606899 1.60E-199 dispersed
Cone11ag0951 Cone-Chr11:7758593 Cone18ag0616 Cone-Chr18:3122230 9.80E-283 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81900 PF00400 WD40 1.80E-05 CL0186 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0951 - - - 0.0