Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0966 ATGGGGGTAAGTGTAGCCGCGGCAGTGGGCAATGACGCTCTAAAGGAGAAGGCAGCAATGATGAGACAATCCCTGCAAAAGAGCCAAACCATCACTGACAACGTCGTCTCCATCCTCGGATCCTTTGACCACCGTCTCTCCGCCCTAGAAACCGCCATGCGTCCCACTCAGATTAGAACCCACTCTGTTCGTAAAGCTCATGAGAATATCGACAAGACATTAACTGCTACAGATGTTGTATTGAAACAATTTGATCTTTGTCGCCAGGCAGAGGTGAAAATACTAAAAGGGCCCCATGAGGACTTGGAGAGTTATCTAGAAGCAATTGATCAGCTCAGAAGAAACATTCATTTCTTTAGCACCAACAACAAGGGCTTTAAGAGTAGTGAAGGGGTCGTTAACCATGCCAATAATATCCTTTCTAAAGCCATTTCAAAGCTTGAAGACGAGTTTAAGCAGCTATTATCTAATTACAGCAAAGCAGTGGAACCTGAGCACTTATTTGATGGCCTTCCAAACTCACTAAGACCGCCCTCAGCCTCTTCTAACGACCCATTTGGTTCAGACGGCAAAAATCCTTCCTCACATCATCACTCTGATCACCAAAAAGCTACCTCTGAAACTGCAGTTTACACCCCTCCAACTCTCATACCACCCCGAGTCCTACCTCTTCTACATGATTTAGCACAACAAATGGTCCAAGCCGGTCACCACCAACAATTACTTAAAATATATCGGGATACTCGGTCTATAGTTCTTGAAGAAAGCCTTTCAAAACTAGGAGTCGAGAAGCTTAGTAGAGATGATATTCAAAAAATGCAATGGGAGCTTCTTGAGGCCAAAATCGGGAACTGGATTCATTTTATGCGAATTGCTGTCAAACTGCTTTTTGCTGGAGAACGGAAAGTTTGTGATCAGATATTTTCCGGCTTCGATTCTCTTAAAGATCAAAGCTTCGCTGATGTCACTTCAAGCAGTGTCACTATCCTCTATAGTTTCGGAGAAGCCATTGCTAGAAGCAAAAGATCGCCCGAGAAATTGTTTGTTCTTCTCGACATGTATGAGATTCTTAGAGAGCTTCACCCAGAGATTGAGATGATCTTTAGTGGGAAATCATGCAATGAGATTAGAGAATCCGCGTTGAGTTTGACCAAACGGCTAGCTCAGACAGCTCAAGAGACATTTGGAGATTTTGAGGAAGCTGTCGAGAAAGATGCAACAAAAACTGCTGTCTTGGACGGAACGGTCCATCCTTTGACAAGCTATGTGATCAACTATGTCAAGTTTCTACTTGATTATCAATCGACCTTGAAGCAACTGTTTCAAGAGTTTGAAAACGGAGGTCAAATTCAAACAAGTTCACAGTTAGCCTCCGTGATGATGAAGATAATGCATGCTCTTCAATCCAATTTGGACGGGAAATCTAAGCAGTATAAAGATCCTTCTTTGACCCACTTGTTTCTCATGAACAATATCCATTATATTGTCCGATCAGTTCGCAGGTCTGAAGCAAAGGATTTATTGGGGGATGATTGGGTGCAAAGACATAGGAGGATTGTACAGCAGCATGCAAATCAATACAAAAGGATTGGATGGGGAAAGATATTGCAGTGCCTCTCGGCTCAAGGCCTGACCTCGTCTGGAGGTGGTAGTAGTGGGGCCGGAGGAGGAGGTGGAGATGGAGGAAGTGGGAGTGGAGCATCAAGAGCTCTTGTCAAAGAAAGGTTCAAGACATTTAATATTCAATTTGAGGAGCTTCATCAAAAGCAGTCTCAATGGACAGTCCCAGATGCCGAGTTACAGGAATCTCTTAGGCTTGCAGTGGCTGAAGTCCTGTTACCAGCCTACCGCTCTTTTCTAAAACGCTTCGGGCCTCTAGTTGATAGTGGGAAGAACCCACAGAAGTATATAAGGTACCAGCCGGAGGATCTGGAACGAATGCTCGGTGAATTTTTTGAGGGGAAGAAGTTGACTGAACCCAAGCGGTAG 1989 44.24 MGVSVAAAVGNDALKEKAAMMRQSLQKSQTITDNVVSILGSFDHRLSALETAMRPTQIRTHSVRKAHENIDKTLTATDVVLKQFDLCRQAEVKILKGPHEDLESYLEAIDQLRRNIHFFSTNNKGFKSSEGVVNHANNILSKAISKLEDEFKQLLSNYSKAVEPEHLFDGLPNSLRPPSASSNDPFGSDGKNPSSHHHSDHQKATSETAVYTPPTLIPPRVLPLLHDLAQQMVQAGHHQQLLKIYRDTRSIVLEESLSKLGVEKLSRDDIQKMQWELLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFSGFDSLKDQSFADVTSSSVTILYSFGEAIARSKRSPEKLFVLLDMYEILRELHPEIEMIFSGKSCNEIRESALSLTKRLAQTAQETFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLLDYQSTLKQLFQEFENGGQIQTSSQLASVMMKIMHALQSNLDGKSKQYKDPSLTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRIGWGKILQCLSAQGLTSSGGGSSGAGGGGGDGGSGSGASRALVKERFKTFNIQFEELHQKQSQWTVPDAELQESLRLAVAEVLLPAYRSFLKRFGPLVDSGKNPQKYIRYQPEDLERMLGEFFEGKKLTEPKR 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7837112 7840911 - Conep11aG0099800.1 Cone11ag0966 448218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0966 662 MobiDBLite consensus disorder prediction 169 214 - -
Cone11ag0966 662 SUPERFAMILY Cullin repeat-like 80 653 IPR016159 -
Cone11ag0966 662 FunFam Exocyst subunit Exo70 family protein 88 660 - -
Cone11ag0966 662 Coils Coil 137 157 - -
Cone11ag0966 662 MobiDBLite consensus disorder prediction 547 567 - -
Cone11ag0966 662 Gene3D Exocyst complex component Exo70 78 662 - -
Cone11ag0966 662 Pfam Exo70 exocyst complex subunit C-terminal 284 649 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cone11ag0966 662 Pfam Exocyst complex component Exo70 N-terminal 73 156 - -
Cone11ag0966 662 PANTHER EXOCYST COMPLEX PROTEIN EXO70 16 655 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cone11ag0966 662 MobiDBLite consensus disorder prediction 175 190 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0966 Cone-Chr11:7837112 Cone5ag0416 Cone-Chr5:1766096 0 dispersed
Cone11ag0966 Cone-Chr11:7837112 Cone1ag1422 Cone-Chr1:56849045 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0966 K07195 - vvi:100253247 1029.24