Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0980 ATGACTTCATATCGACCCCTTTTGATTCCTTCTCCTAGAACAACTGGAACACAAGAGCATCTTCCTCCCTTGCCCACTTTTCACGATCTAACAACCAAACCAGAATTAAGCAATTCCGGATCGGCAACAAGTATGGATTCTTCAAACCCAGTTGGTACTTTCACAAATGTTGAATTGGGCCATCGCTCTTCTTCACGAAGAAGTGCTAATTCACTCTACTCAAAATCCCAAGCTGGAAATTCAATAAGAGAAGTGAGTTTTGCCGATTTGGACTCAAAACCGGTCCGTTTCGGGTCGAGACGGGCAGATTCAGAAGCCCTTAGCGTTTCCCAGAAGGAGATCAAAGATGAAGATGCCAGGTTGGTCTATGTCAATGATCCCGTAAAGTCAAATGATAGGTTTGACTTTGCGGGAAACTCAATCCGAACAGGGAAGTATTCATTCATCACTTTCTTGCCTCGGAATCTTTTTGAACAGTTTCATAGAGTTGCATACATATATTTCCTTGTCATTGCTGTTCTTAATCAATTGCCCCAACTTGCCGTTTTTGGCCGAGGAGTTTCCATCCTTCCCTTATCTTTCGTTTTGTTAGTTACTGCTGTTAAAGATGCATATGAGGATTGGAGAAGACATAAGTCAGACCGAATTGAGAATAACAGATTAGCCTTAGTTTTGGTCAATAATCAGTTTGAGTCAAAGAAATGGAAAGATATAAGAGTAGGCGAAATCATAAAACTCCAAGCAAATGAAACCATTCCTTGTGATATGGTCTTACTCTCTACCAGTGATAGTACTGGAGTTGCCTATGTTCAAACGATTAATCTTGACGGGGAATCTAATTTGAAAACCCGTTATGCAAAGCAAGAGACTCTTTCCAAATTGCCCGAAAAGGAGAATTTTTCGGGACTGATTACTTGTGAAAAGCCGAATAGGAACATATATGGGTTTCAAGCATGTATGGATATTGATGGGAAAAGGCTTTCTCTTGGACCGTCTAATATTGTTCTTAGAGGATGTGAGCTCAAGAACACTACATGGGCCCTTGGAGTTGTGGTCTATGCTGGTCGTGAGACCAAAGCTATGCTTAACAATTCGGGAGCCCCATCTAAGAGGAGCCGACTTGAGACAAGCATGAACTTCGAAGTCATCATTTTGTCTTTTTATCTTATCGCTTTGTGCATGGTAGTTTCAGTTTGTGCTGCTGTTTGGTTCATTAGAAAGGGGGATGAATTGGACAACTTGCCGTATTTCAGAAAGAAGGACTACTCAGAGATTCCAGCTGATGATTATAACTTTTATGGATGGGGACTGGATACATTATTCGTCTTTCTCATGTCTGTTATTGTCTTCCAGATAATGATCCCGATATCTTTGTATATTTCCATGGAGCTTGTTCGGGTTGGTCAGGCTTATTTCATGATCCGTGATAGTAAAATGTATGATAAGGCATCCAATTCTAGGTTTCAATGTAGGGCATTGAATATAAATGAAGATTTGGGGCAAATAAGGTATGTCTTTTCTGACAAGACTGGTACACTTACCGAAAACAAGATGGAATTTCAATGTGCAAGCATTTGGGGGGTAGATTATAGTGGAAAAGCTAGTTCTGAAAGCGAGCAAATTGGGTACTCTGTTCAAGTGGATGGAAATGTTTTGAGACCGAAGATGAAGGTGAGGGTTGATCCCGAGCTTTTAAGGTTATCTGAAAGTGGAAAGGATAACAAGGAAGGAAAATATATTTATGATTTCTTTCTTGCACTGGCTACGTGCAATACTATTGTTCCGATAGTTACAGACACTTCAGATCCTTCTGTGAAGTTAGTTGATTATCAGGGAGAATCTCCGGATGAACAGGCATTGGTTTATGCAGCTGCGGCCTATGGTTTCATGCTTATTGAAAGAACTTCTGGCCATATAGTTGTTGACGTCCAAGGTGAAAGACAAAGATTCAATGTTTTAGGTTTACACGAGTTTGATAGTGACCGGAAAAGAATGTCAGTGATATTGGGCTTCCCAGATGGGACCTTCAAAGTCTTTGTGAAAGGGGCAGACACAACCATGTTTAAGGTGAGAGATAAATCTTCAAACCTGGAGATAATCCAATCTACTCAATCACACCTTCATGCTTATTCCTCACTTGGTTTGAGAACACTTGTCGTGGGTATGCGTGAATTGACCGGTGTAGAATTCGAGCAATGGCACTTGCTTTTCGAGGAAGCAAACACTGCCATTATTGGCCGGGCAATTCGCCTAAAAGAAGTTGCCACCAAAGTGGAAAATGTTGTGAAAATTCTTGGGGCATCTGGAATTGAGGACAAACTGCAAGATGGGGTTCCGGAAGCTATTGAGTCTTTGAGAATGGCGGGGATTAAAGTATGGGTTTTGACCGGAGATAAGCAAGAAACTGCCATTTCGATTGGGTACTCCTCAAAGCTTCTTACAAGGAGGATGACTCAACTTATAATCAATAGCAACTCGAAAGGGTCTTGTGAGAGGAGTTTGGATGAGGCAATTCTCATGTCGAAGACGCTCTTAAATGGGCAAACAGGCCCACGTGATGGTGGAGAAAACAATGGAGCTGGTGCAAATTCCTCCGCCTTGATCATTGATGGCACTAGCCTTGTTCATATCCTTGACGGCGACCTTGAAGAAAAGTTATTCCAATTGGCTTCTAATTGTTCCGTGGTGCTATGTTGTCGGGTAGCTCCGTTACAAAAAGCCGGAATCATTGCCCTTGTGAAAAGCCGGACTTCTGACATGACCCTTGCCATTGGAGATGGCGCTAATGACGTTTCAATGATCCAAATGGCGGACGTGGGGGTCGGGATTAGTGGGCAGGAGGGAAGACAAGCCGTAATGGCATCGGACTTTGCTATGGGTCAGTTCAGATTTTTGGTTCCCCTTCTATTGGTCCATGGCCATTGGAATTATCAGAGAATGGGGTACATGATTTTATACAACTTTTACAAGAGTGCGGTGATGGTCCTTATTTTGTTTTGGTACGTGCTATTTACGAGTTTTTCCTTGACACCTGCAATCAACGAATGGAGCAGTATGCTATATTCTATAATCTACACCTCACTGCCCACAATTATAGTTGGAATGCTTGACAAGGATCTGAGCAGAAGGACTCTAATGAAGTATCCTCAGCTCTACGGGGCAGGCCACAGGAAAGAGGCCTACAACCGGAAACTCTTTTGGATAACAATGGCTGACACATTGTGGCAAAGCATGGTCATTTTCTTCATCCCCCTCTTGGCTTATTGGAAGAGTACTATTAGCATTTCGAGCATAGGAGATCTTTGGACCATCGCCTTGGTCATTTTGGTTAATTTACACTTGGCCATGGATGTTACCCGTTGGAATTGGCTCGTTCATTTGGTCATTTGGGGTTCTATTGTTGCCACCTTCATTTGCATCTTCATTATCGATGCTTTACCTATGTTATTCGGTTACTGGGCGATATTCCATGCCATGTCGGAAGCATCATTTTGGCTATGCTTGCTGATAATTATCGTAGCAGGCGTTGTTCCACGTCTCGTTGTAAAGTACGTCCATCAATATTATGTGCCATCTGATATTCGGATTGCGAAAGAAGTTGAGAAGAATGAAAGCCGACGGGAATTAGGAACAATTGTACAGATAGAAATGAACCCTTTGGATGGGTGA 3669 42.27 MTSYRPLLIPSPRTTGTQEHLPPLPTFHDLTTKPELSNSGSATSMDSSNPVGTFTNVELGHRSSSRRSANSLYSKSQAGNSIREVSFADLDSKPVRFGSRRADSEALSVSQKEIKDEDARLVYVNDPVKSNDRFDFAGNSIRTGKYSFITFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLSFVLLVTAVKDAYEDWRRHKSDRIENNRLALVLVNNQFESKKWKDIRVGEIIKLQANETIPCDMVLLSTSDSTGVAYVQTINLDGESNLKTRYAKQETLSKLPEKENFSGLITCEKPNRNIYGFQACMDIDGKRLSLGPSNIVLRGCELKNTTWALGVVVYAGRETKAMLNNSGAPSKRSRLETSMNFEVIILSFYLIALCMVVSVCAAVWFIRKGDELDNLPYFRKKDYSEIPADDYNFYGWGLDTLFVFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDSKMYDKASNSRFQCRALNINEDLGQIRYVFSDKTGTLTENKMEFQCASIWGVDYSGKASSESEQIGYSVQVDGNVLRPKMKVRVDPELLRLSESGKDNKEGKYIYDFFLALATCNTIVPIVTDTSDPSVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVVDVQGERQRFNVLGLHEFDSDRKRMSVILGFPDGTFKVFVKGADTTMFKVRDKSSNLEIIQSTQSHLHAYSSLGLRTLVVGMRELTGVEFEQWHLLFEEANTAIIGRAIRLKEVATKVENVVKILGASGIEDKLQDGVPEAIESLRMAGIKVWVLTGDKQETAISIGYSSKLLTRRMTQLIINSNSKGSCERSLDEAILMSKTLLNGQTGPRDGGENNGAGANSSALIIDGTSLVHILDGDLEEKLFQLASNCSVVLCCRVAPLQKAGIIALVKSRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYKSAVMVLILFWYVLFTSFSLTPAINEWSSMLYSIIYTSLPTIIVGMLDKDLSRRTLMKYPQLYGAGHRKEAYNRKLFWITMADTLWQSMVIFFIPLLAYWKSTISISSIGDLWTIALVILVNLHLAMDVTRWNWLVHLVIWGSIVATFICIFIIDALPMLFGYWAIFHAMSEASFWLCLLIIIVAGVVPRLVVKYVHQYYVPSDIRIAKEVEKNESRRELGTIVQIEMNPLDG 1222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7892699 7897982 - Conep11aG0101200.1 Cone11ag0980 448232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0980 1222 Gene3D - 608 739 IPR023299 GO:0000166(InterPro)
Cone11ag0980 1222 FunFam Phospholipid-transporting ATPase 761 964 - -
Cone11ag0980 1222 SFLD p-type atpase 490 975 IPR044492 -
Cone11ag0980 1222 Gene3D - 192 363 - -
Cone11ag0980 1222 FunFam Phospholipid-transporting ATPase 194 363 - -
Cone11ag0980 1222 CDD P-type_ATPase_APLT_Dnf-like 138 1084 - -
Cone11ag0980 1222 NCBIfam phospholipid-translocating P-type ATPase 136 1199 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cone11ag0980 1222 SUPERFAMILY HAD-like 501 979 IPR036412 -
Cone11ag0980 1222 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 110 1198 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Cone11ag0980 1222 MobiDBLite consensus disorder prediction 1 21 - -
Cone11ag0980 1222 Pfam E1-E2 ATPase 222 462 - -
Cone11ag0980 1222 MobiDBLite consensus disorder prediction 1 75 - -
Cone11ag0980 1222 PRINTS P-type cation-transporting ATPase superfamily signature 506 520 - -
Cone11ag0980 1222 PRINTS P-type cation-transporting ATPase superfamily signature 924 943 - -
Cone11ag0980 1222 Pfam Cation transport ATPase (P-type) 612 688 - -
Cone11ag0980 1222 MobiDBLite consensus disorder prediction 31 75 - -
Cone11ag0980 1222 SUPERFAMILY Calcium ATPase, transmembrane domain M 138 1191 IPR023298 -
Cone11ag0980 1222 Pfam Phospholipid-translocating P-type ATPase C-terminal 952 1192 IPR032630 -
Cone11ag0980 1222 Pfam Phospholipid-translocating ATPase N-terminal 122 188 IPR032631 -
Cone11ag0980 1222 NCBIfam HAD-IC family P-type ATPase 876 1007 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone11ag0980 1222 Gene3D - 761 964 IPR023214 -
Cone11ag0980 1222 SFLD Haloacid Dehalogenase 490 975 - -
Cone11ag0980 1222 FunFam Phospholipid-transporting ATPase 609 742 - -
Cone11ag0980 1222 SUPERFAMILY Calcium ATPase, transduction domain A 219 360 IPR008250 -
Cone11ag0980 1222 ProSitePatterns E1-E2 ATPases phosphorylation site. 508 514 IPR018303 -
Cone11ag0980 1222 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 513 732 IPR023299 GO:0000166(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0980 Cone-Chr11:7892699 Cone3ag0482 Cone-Chr3:2347796 0 dispersed
Cone11ag0980 Cone-Chr11:7892699 Cone18ag0600 Cone-Chr18:3025610 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0980 K14802 - mdm:103420527 1829.3