Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0985 ATGGTGAACTCAATGGAAATCTTCGAAGAAATGGGCTTTTATGGTAATCTCGAGTTTCTTCAAGCCACCCCTCTTGGGCAAAGAGAAGCGGCTCAAGAGCATGAATCAAAGGTGGTTATGGAGGATGAGGAGGGTTATAGTGATGAGGAATCAGTAGATCTTGAGGAGCTTGAGAGAAGAATGTGGAGAGACCGGACTCTCTATAGGCGGCTCAAAGAACGGAAAAAGGGAGGCCAAGAAGTAGGAGCGAGTGAAAGTGCAAAGAGGAAACATCAATCCCAAGATCAAGCCCAGAGGAAAAAGATGTCAAGGGCACAAGATGGTATTTTAAAATACATGCTCAAAATGATGGAGGTTTGTAATGCTCAAGGTTTTGTTTATGGAATCATCCCTGAGAAAGGAAAGCCGGTTAGTGGAGCCTCAGATAATCTCCGTGCATGGTGGAAGGAAAAGGTTCGATTTGACCGTAATGGGCCCGCTGCAATCTCCAAGTACGATCTAGACCACTGGATTTCAATTCCGGGAAAGACTTCTTCTGATGTAGAGGCATCAATTTCTCAAAACTTACAAGAGCTCCAAGACACTACTTTAGGATCGCTTCTTTCAGCTTTAATGCAGCATTGTGACCCGCCCCAGAGGCGGTTTCCATTGGAGAAGGGTGTTGCTCCACCGTGGTGGCCCACTGGAAACGAGGAATGGTGGTCTTCTCAAGTGGGTTTCTTACCGAACAATGATGGAGCAACTCCTCCTTATAAGAAGCCTCATGATCTAAAGAAGGCTTGGAAGGTTAGTGTTCTTACGGCTGTTATCAAACATATTTCCCCTGACACTGCCAAGATCAGAAAGCTTGTTCTTCAGTCAAAATGTCTTCAAGACAAAATGACTGCCAAAGAGAGTGCCACTTGGCTTGCTATCGTAAACCAGGAAGAAGCTTTGGCCCGTAAGTTATATCCCGATAAATTCTTACCTGAAATATCGCCTCTTGGGTCTGACTCTCTCATGATTGGTGACACTAGTGATTATGATGTTGAAGGTGTTAAAGAATGCAAGCCTTCTGGTAATAAAGATCTTTTCAATACAATGATGCCGTTAATGGGTCCCCAAATTAAAGGAGAGGTCTTAGAGAGTGATATATCGGATTTTGGCTTGAAGCGGAAGAAGGTGAGTGATGAAAGAGATCATATAATGGCGGGTCAAACTCAAAAAACATATTATACATGTGAGAATTCTCAGTGCCCTTATAACGATGTCCGTCTTGGGTTTCCGGACAGGAGTTCTAAAAACATCCACCAACTGAATTGTCCATTTCGGACTACTTCTGTCCAAAGTCTTGCAATATCAAATTTTAACATAACAAGTGACCAAGCTCCAAACCATAGTGTTAAGGGACTTGAGCTGATTCCGGAAGACGGGCAGAAAATGATATCCGATCTGATGACATTCTATGACAGTAATCTCCAAAGGAGCGAAAACTTTGATCAAGTGAATATTGATGTTACCGACGGTCTTAATCATCGGCAGCAAAACTTCCAACTTAATCGGATGGACGGGAAATTTTACGGGCAGGAAGGAATCACAGGAGGTGGCTCCTATACTAATTTTCCATCAATTCAGTTCGATCAATGTAACTCATACAACTTGGAAGACACCTCCTTCTGGTACCTTTGA 1668 43.23 MVNSMEIFEEMGFYGNLEFLQATPLGQREAAQEHESKVVMEDEEGYSDEESVDLEELERRMWRDRTLYRRLKERKKGGQEVGASESAKRKHQSQDQAQRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAISKYDLDHWISIPGKTSSDVEASISQNLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPTGNEEWWSSQVGFLPNNDGATPPYKKPHDLKKAWKVSVLTAVIKHISPDTAKIRKLVLQSKCLQDKMTAKESATWLAIVNQEEALARKLYPDKFLPEISPLGSDSLMIGDTSDYDVEGVKECKPSGNKDLFNTMMPLMGPQIKGEVLESDISDFGLKRKKVSDERDHIMAGQTQKTYYTCENSQCPYNDVRLGFPDRSSKNIHQLNCPFRTTSVQSLAISNFNITSDQAPNHSVKGLELIPEDGQKMISDLMTFYDSNLQRSENFDQVNIDVTDGLNHRQQNFQLNRMDGKFYGQEGITGGGSYTNFPSIQFDQCNSYNLEDTSFWYL 555
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 7920393 7923297 - Conep11aG0101700.1 Cone11ag0985 448237
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0985 555 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 20 506 IPR006957 GO:0003677(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(InterPro)
Cone11ag0985 555 Coils Coil 54 74 - -
Cone11ag0985 555 SUPERFAMILY DNA-binding domain of EIN3-like 188 313 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cone11ag0985 555 MobiDBLite consensus disorder prediction 74 102 - -
Cone11ag0985 555 FunFam Ethylene insensitive 3-like 1 180 320 - -
Cone11ag0985 555 Pfam Ethylene insensitive 3, DNA-binding domain 55 310 IPR047091 GO:0003700(InterPro)
Cone11ag0985 555 FunFam Ethylene insensitive 3-like 1 91 169 - -
Cone11ag0985 555 Gene3D - 178 321 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cone11ag0985 555 Gene3D - 91 172 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0985 Cone-Chr11:7920393 Cone5ag0446 Cone-Chr5:1893514 2.87E-198 dispersed
Cone11ag0985 Cone-Chr11:7920393 Cone18ag0594 Cone-Chr18:2981687 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44357 PF00076 RRM_1 7.70E-12 CL0221 Cone TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0985 K14514 - vvi:100250496 624.394