Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone11ag0985 | ATGGTGAACTCAATGGAAATCTTCGAAGAAATGGGCTTTTATGGTAATCTCGAGTTTCTTCAAGCCACCCCTCTTGGGCAAAGAGAAGCGGCTCAAGAGCATGAATCAAAGGTGGTTATGGAGGATGAGGAGGGTTATAGTGATGAGGAATCAGTAGATCTTGAGGAGCTTGAGAGAAGAATGTGGAGAGACCGGACTCTCTATAGGCGGCTCAAAGAACGGAAAAAGGGAGGCCAAGAAGTAGGAGCGAGTGAAAGTGCAAAGAGGAAACATCAATCCCAAGATCAAGCCCAGAGGAAAAAGATGTCAAGGGCACAAGATGGTATTTTAAAATACATGCTCAAAATGATGGAGGTTTGTAATGCTCAAGGTTTTGTTTATGGAATCATCCCTGAGAAAGGAAAGCCGGTTAGTGGAGCCTCAGATAATCTCCGTGCATGGTGGAAGGAAAAGGTTCGATTTGACCGTAATGGGCCCGCTGCAATCTCCAAGTACGATCTAGACCACTGGATTTCAATTCCGGGAAAGACTTCTTCTGATGTAGAGGCATCAATTTCTCAAAACTTACAAGAGCTCCAAGACACTACTTTAGGATCGCTTCTTTCAGCTTTAATGCAGCATTGTGACCCGCCCCAGAGGCGGTTTCCATTGGAGAAGGGTGTTGCTCCACCGTGGTGGCCCACTGGAAACGAGGAATGGTGGTCTTCTCAAGTGGGTTTCTTACCGAACAATGATGGAGCAACTCCTCCTTATAAGAAGCCTCATGATCTAAAGAAGGCTTGGAAGGTTAGTGTTCTTACGGCTGTTATCAAACATATTTCCCCTGACACTGCCAAGATCAGAAAGCTTGTTCTTCAGTCAAAATGTCTTCAAGACAAAATGACTGCCAAAGAGAGTGCCACTTGGCTTGCTATCGTAAACCAGGAAGAAGCTTTGGCCCGTAAGTTATATCCCGATAAATTCTTACCTGAAATATCGCCTCTTGGGTCTGACTCTCTCATGATTGGTGACACTAGTGATTATGATGTTGAAGGTGTTAAAGAATGCAAGCCTTCTGGTAATAAAGATCTTTTCAATACAATGATGCCGTTAATGGGTCCCCAAATTAAAGGAGAGGTCTTAGAGAGTGATATATCGGATTTTGGCTTGAAGCGGAAGAAGGTGAGTGATGAAAGAGATCATATAATGGCGGGTCAAACTCAAAAAACATATTATACATGTGAGAATTCTCAGTGCCCTTATAACGATGTCCGTCTTGGGTTTCCGGACAGGAGTTCTAAAAACATCCACCAACTGAATTGTCCATTTCGGACTACTTCTGTCCAAAGTCTTGCAATATCAAATTTTAACATAACAAGTGACCAAGCTCCAAACCATAGTGTTAAGGGACTTGAGCTGATTCCGGAAGACGGGCAGAAAATGATATCCGATCTGATGACATTCTATGACAGTAATCTCCAAAGGAGCGAAAACTTTGATCAAGTGAATATTGATGTTACCGACGGTCTTAATCATCGGCAGCAAAACTTCCAACTTAATCGGATGGACGGGAAATTTTACGGGCAGGAAGGAATCACAGGAGGTGGCTCCTATACTAATTTTCCATCAATTCAGTTCGATCAATGTAACTCATACAACTTGGAAGACACCTCCTTCTGGTACCTTTGA | 1668 | 43.23 | MVNSMEIFEEMGFYGNLEFLQATPLGQREAAQEHESKVVMEDEEGYSDEESVDLEELERRMWRDRTLYRRLKERKKGGQEVGASESAKRKHQSQDQAQRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAISKYDLDHWISIPGKTSSDVEASISQNLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPTGNEEWWSSQVGFLPNNDGATPPYKKPHDLKKAWKVSVLTAVIKHISPDTAKIRKLVLQSKCLQDKMTAKESATWLAIVNQEEALARKLYPDKFLPEISPLGSDSLMIGDTSDYDVEGVKECKPSGNKDLFNTMMPLMGPQIKGEVLESDISDFGLKRKKVSDERDHIMAGQTQKTYYTCENSQCPYNDVRLGFPDRSSKNIHQLNCPFRTTSVQSLAISNFNITSDQAPNHSVKGLELIPEDGQKMISDLMTFYDSNLQRSENFDQVNIDVTDGLNHRQQNFQLNRMDGKFYGQEGITGGGSYTNFPSIQFDQCNSYNLEDTSFWYL | 555 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7920393 | 7923297 | - | Conep11aG0101700.1 | Cone11ag0985 | 448237 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone11ag0985 | 555 | PANTHER | ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN | 20 | 506 | IPR006957 | GO:0003677(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(InterPro) | |
Cone11ag0985 | 555 | Coils | Coil | 54 | 74 | - | - | |
Cone11ag0985 | 555 | SUPERFAMILY | DNA-binding domain of EIN3-like | 188 | 313 | IPR023278 | GO:0003700(InterPro)|GO:0005634(InterPro) | |
Cone11ag0985 | 555 | MobiDBLite | consensus disorder prediction | 74 | 102 | - | - | |
Cone11ag0985 | 555 | FunFam | Ethylene insensitive 3-like 1 | 180 | 320 | - | - | |
Cone11ag0985 | 555 | Pfam | Ethylene insensitive 3, DNA-binding domain | 55 | 310 | IPR047091 | GO:0003700(InterPro) | |
Cone11ag0985 | 555 | FunFam | Ethylene insensitive 3-like 1 | 91 | 169 | - | - | |
Cone11ag0985 | 555 | Gene3D | - | 178 | 321 | IPR023278 | GO:0003700(InterPro)|GO:0005634(InterPro) | |
Cone11ag0985 | 555 | Gene3D | - | 91 | 172 | IPR023278 | GO:0003700(InterPro)|GO:0005634(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0985 | Cone-Chr11:7920393 | Cone5ag0446 | Cone-Chr5:1893514 | 2.87E-198 | dispersed | |
Cone11ag0985 | Cone-Chr11:7920393 | Cone18ag0594 | Cone-Chr18:2981687 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44357 | PF00076 | RRM_1 | 7.70E-12 | CL0221 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone11ag0985 | K14514 | - | vvi:100250496 | 624.394 |