Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag0986 ATGGTGAATTCTAATTGTTCCTTTACGCCCTACGGCAAAATAGATGAAGCCAAACAAGCAAAGCTCGAATCTCGCCGGAGAACCAAAAAGCAAATCATCATCATAGTCTTATCCTCCATAGTTCTAGTCAGCGTCGTCCTTGCCACCGTCTATAGCACTTTAGCTTCCAACAAAAACAACAACGGCGGCGGAGCTAACCACAATAACCCTCTCTCTGCTGTTTGCGAGGTCACTCTCTACCCTGATACGTGTTATAGCACTCTCTTTCCTTTGATCAACTCGACCAATCTCCAACCTCATGAAATCTCCAAGTTAGCGATTCTCGTTGCTGTTAACGAACTCTCACGTGCCAGCAACGATGTCCTAAAGGGCGTGATTCTGAACTCACCGGACAACATGACAGTCCACGCTTTGGAGAATTGTCAACAACTTTTGAACCTGGCTTTAGATCATTTAAACCAAACGCTTACATCGACCCAAGCTGGTGATGATCTTCAAACGTGGTTAAGCTCCGCCGGTACTTATCAACAAACGTGTATCGACGGATTAGAGGAAATCAATAGCGGTTTGAAGGATATTATTTCTGGATTTTTGAAGAACTCGTTGGAATCGACGAGTAATGGTCTTGCGATCATAACGTGGTTATCTAAGCTGACGGGGTCCGTGAAAGGAGGCCGGAGGTTGATGGGTTCGACCGGCATTGAGCCGGATTGGGTGGGACCGGGCGTGAGGAGGTTGTTGCAGAGTGATTTGCAGCGGCAAGCGGGGTTTGTGGTATCGAAAGACGGTTCGGGAAAGTATAAAACGATTGGGGATGCGCTTAAGGATGTGCCGGATAAGAGTGAGAATAGGTCAGTGATTTATGTGAAGAGAGGGGTTTATTATGAGAACGTTAGGGTTGAGAAGACCAAGTGGAACGTGGTGTTTGTCGGTGATGGGATGAATTTGACGGTTGTTTCCGGCCGGCTCAATTTCGTCGACGGCACTCCGACGTTTTCAACCGCTACATTTGCCGTTTTGGGGAAGGGGTTTGTTGCACGAGACATAGGCTTCAAGAACACCGCAGGAGCAATCAAGCACCAAGCCGTAGCCCTACTGTCGACCGCTGACCAATCGGTTTTTTACCGATGTCTCGCCGATGCATATCAAGATACCCTGTACACACATTCAAACCGTCAATTCTACCAGGAATGCACCATCTACGGCACAGTGGACTTCATCTTTGGAAACTCGGCTGTTGTTTTCCAAAACTGCACCATAATGCCAAGATTACCATTACAAGGCCAACAAAACATGGTGACGGCCCAAGGAAAATTCGACCCGAATCAAAATACCGGCATTTCAATACAAGATTCGATCATCCAGCCTCTTGGAAACTTGAGCTCCAGAGACACGTACCTCGGCCGGCCGTGGAAGAATTATTCAACAACGGTTTACCTAACTAACTACTTTGGTGGGTTCATTAACCCAAAGGGGTGGTTTCCATGGGTTGGCACCACTGCACCAGACACTATCTTTTATGCGGAGTATGGAAATTTTGGTCCCGGTTCTTCAACGGTGAATAGAGTGAAATGGAGGGGGGTGAGGAGTAATATTACTAAGAAACAAGCTATGGGATTTACGGTTTCTTCGTTTATCGGCGGCGGGAAGTGGATATCGACGGCGGGTATTCAATTCAAATCAGGCATCTGA 1692 47.16 MVNSNCSFTPYGKIDEAKQAKLESRRRTKKQIIIIVLSSIVLVSVVLATVYSTLASNKNNNGGGANHNNPLSAVCEVTLYPDTCYSTLFPLINSTNLQPHEISKLAILVAVNELSRASNDVLKGVILNSPDNMTVHALENCQQLLNLALDHLNQTLTSTQAGDDLQTWLSSAGTYQQTCIDGLEEINSGLKDIISGFLKNSLESTSNGLAIITWLSKLTGSVKGGRRLMGSTGIEPDWVGPGVRRLLQSDLQRQAGFVVSKDGSGKYKTIGDALKDVPDKSENRSVIYVKRGVYYENVRVEKTKWNVVFVGDGMNLTVVSGRLNFVDGTPTFSTATFAVLGKGFVARDIGFKNTAGAIKHQAVALLSTADQSVFYRCLADAYQDTLYTHSNRQFYQECTIYGTVDFIFGNSAVVFQNCTIMPRLPLQGQQNMVTAQGKFDPNQNTGISIQDSIIQPLGNLSSRDTYLGRPWKNYSTTVYLTNYFGGFINPKGWFPWVGTTAPDTIFYAEYGNFGPGSSTVNRVKWRGVRSNITKKQAMGFTVSSFIGGGKWISTAGIQFKSGI 563
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7926614 7928580 + Conep11aG0101800.1 Cone11ag0986 448238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag0986 563 SUPERFAMILY Pectin lyase-like 255 561 IPR011050 -
Cone11ag0986 563 CDD PMEI-like_3 73 217 - -
Cone11ag0986 563 Pfam Plant invertase/pectin methylesterase inhibitor 72 211 IPR006501 GO:0004857(InterPro)
Cone11ag0986 563 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Cone11ag0986 563 FunFam Pectinesterase 250 563 - -
Cone11ag0986 563 Pfam Pectinesterase 258 548 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cone11ag0986 563 Gene3D - 251 563 IPR012334 -
Cone11ag0986 563 Gene3D Invertase/pectin methylesterase inhibitor family protein 68 216 IPR035513 -
Cone11ag0986 563 PANTHER PECTINESTERASE 32 553 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cone11ag0986 563 SMART PMEI_2 66 211 IPR006501 GO:0004857(InterPro)
Cone11ag0986 563 NCBIfam pectinesterase inhibitor domain 41 215 IPR006501 GO:0004857(InterPro)
Cone11ag0986 563 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 70 216 IPR035513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0986 Cone-Chr11:7926614 Cone4ag0890 Cone-Chr4:6423977 2.57E-144 dispersed
Cone11ag0986 Cone-Chr11:7926614 Cone18ag0592 Cone-Chr18:2959618 3.38E-237 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag0986 - - - 0.0