Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone11ag0988 | ATGGGGATTCAAACAATGGGATCTCAAGGTGGGGGAGATAGTAACGGCAAACAATCGCAATTCCAGCCATTAGCCCGTCAAAGCTCAATGTATAGTCTCACTCTAGACGAGGTTCAAAACCAATTAGGTGACTTAGGAAAGCCGCTTAGCAGCATGAACCTAGACGAGCTTCTCAAAAACGTATGGATCGTCGAAGCAAACCAATCATCCGTCGGTATGGATGTCGAAGGCAATGGTGGTGGGACCCAATTGGCAAATCAGACAGTGACACTTCAGCACCAGGCGAGCATTTCATTAACCAGCGCGCTTAGTAAGAAAACAGTGGATGAGGTATGGAGAGATATCCAACAAAAAAAAGATGCAAATGACGGGGACAAGATGAAGAAGCCGGCAGGGGAGAGGCAATCCACTTTGGGGGAGATGACATTGGAGGACTTTTTGGTAAAAGCGGGCGTTGTGGCAGAAGCAGAAGGTTGTTCTGGTAAGAAAAGTAGTATGGAAGTAGTTGAGGGGGGAAATGTGGGGCCTCAATTTCTGGGACAGGCACAGCAGTGGGTGCAGTTCCCACAACAGAGTATGATGGGAGTTTATATTCCGGGCCAGCCTATGCATATGGATGGAGGTGGGATGGAAGTTGTGTACGGGGAGAATCCGGTAGGAGTGCCTTCTCCTTTGATGGGGACATTGTCAGATTCTCAGATGGTTGGAAGAAAGAGGGGAAACCCGGAGGAAATTATTGAGAAGACAGTGGAGAGGAGGCAGAAGAGGATGATTAAGAATCGGGAATCGGCTGCTCGATCACGAGCTAGGAAGCAGGCTTATACTACTGAGCTGGAGAACAAGGTTTCGAGATTGGAGGAGGAAAATGAGAGGCTTAGCAAGCAGAAGATGAACAAATTTTGGAGTCTTGGTAGATCGTGTCTATATTAA | 930 | 47.63 | MGIQTMGSQGGGDSNGKQSQFQPLARQSSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWIVEANQSSVGMDVEGNGGGTQLANQTVTLQHQASISLTSALSKKTVDEVWRDIQQKKDANDGDKMKKPAGERQSTLGEMTLEDFLVKAGVVAEAEGCSGKKSSMEVVEGGNVGPQFLGQAQQWVQFPQQSMMGVYIPGQPMHMDGGGMEVVYGENPVGVPSPLMGTLSDSQMVGRKRGNPEEIIEKTVERRQKRMIKNRESAARSRARKQAYTTELENKVSRLEEENERLSKQKMNKFWSLGRSCLY | 309 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7935542 | 7939504 | - | Conep11aG0102000.1 | Cone11ag0988 | 448240 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone11ag0988 | 309 | Gene3D | - | 250 | 301 | - | - | |
Cone11ag0988 | 309 | SMART | brlzneu | 248 | 306 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone11ag0988 | 309 | SUPERFAMILY | Leucine zipper domain | 252 | 295 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone11ag0988 | 309 | Coils | Coil | 268 | 298 | - | - | |
Cone11ag0988 | 309 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 255 | 270 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone11ag0988 | 309 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 250 | 295 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone11ag0988 | 309 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Cone11ag0988 | 309 | CDD | bZIP_plant_BZIP46 | 252 | 296 | - | - | |
Cone11ag0988 | 309 | FunFam | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | 250 | 302 | - | - | |
Cone11ag0988 | 309 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 26 | 296 | IPR043452 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro) | |
Cone11ag0988 | 309 | Pfam | bZIP transcription factor | 252 | 295 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0988 | Cone-Chr11:7935542 | Cone1ag1459 | Cone-Chr1:56983815 | 7.56E-115 | dispersed | |
Cone7ag1568 | Cone-Chr7:10759744 | Cone11ag0988 | Cone-Chr11:7935542 | 4.35E-14 | transposed | |
Cone11ag0988 | Cone-Chr11:7935542 | Cone18ag0589 | Cone-Chr18:2935282 | 5.97E-181 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44358 | None | None | None | None | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone11ag0988 | K14432 | - | mdm:103438647 | 379.407 |