Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1023 ATGGCTGCACCCAAGTCACGGACGGCTCGAACGACGTCGTCGTCGCTTAGGGGCAGCTTCGAGTCGGAAAGGATGGAAGGTGCTGGTAGCTGGGAGGCCCTAGAATGGACCAAGATTGAGCCGGTTTCGCGCTCGGTTTCGCATGTGAAATTGGATTGCTTGCTGGAATCCGAGCAAATAATGGCAGAGGGGTATGGTGTTGTACTCGTCAATACTGATGAGGCGGGCACCTTGTTCGTGACCAATTTTCGTCTTCTTTTTCTGAGTGAAGGAACTAGGGATATTATCGCCCTTGGAACTATACCCTTGGCAACTATAGAGAAGTTTAGTAAAATTGTTGTGAAGGCTCCTTCAGCCCCTCGCCCATCGGAGAAGACTCCGACTCAACGACATTTGCAAGTCATTGGAAAAGATATGAGAATTATAGTCTTTGGGTTTCGCCCCAAAACAAAACAGAGACGCCTAGTTTATGAAGCATTACTTAGATGTACCAAGCCAACAACTTTATGGGATCTCTATGCATTTGCATCCGGACCTTCCAAATACAATAACACCAACCCAAAAGTTCGGTTACTAAATGAGTATTTTCGGCTTCTTGGAATGGGCTGCCGTCGTGCATTGATGAGCATGATTGAAGACGGATCGTTCACATTGTCCAACAACTTGTGGAGAATAACAAACATAAATTCCAATTATGCAATGTGCCCAACTTATCCATTTGCCTTGCTTGTTCCAAAAAGCATTACTGATGAAGAAGTGTTGCAGGCTTCCACCTTCCGTGCAAGATGTCGGCTTCCAGTAGTTTCATGGTGCCATCCTGCAACTGGAGCTGTTCTTGCACGTTCATCTCAACCTCTGGTTGGACTCATGATGAATATGAGGAGTGAGAAAGACGAAAAGCTTGTTGCTGCACTCTGCTCACAACTGGCGGGTGGTAAGGAGTCACGAAGGAAGCTGTATATTTGTGATGCAAGGCCTAGGAAAAATGCTTTAGCAAATGGAGCAATGGGAGGTGGCTCAGAGTCGTCTTCAAATTATTTTCAATCAGAGATAGTTTTCTTTGGGATTGACAACATACATGCAATGAGGGATAGTCTTGCTCGGCTTAGAGATTACTTGGACACTCATGGGGCCACATCATCTGATGGAATGTCATCTTTCTTGAGACATGGTGGTTGGACTTGGAGTGGAGGGAATCTCAGTAGTATGTCCGCTTCTGTGTCAACCCTTGGAGATAGTGGCTGGTTAATACATGTTCAAAATGTCTTGGCCGGTTCTGCATGGATTGCTGCCCGTGTTGCTCTGGAATCAGCATCGGTGCTTGTGCATTGTAGTGATGGATGGGATAGAACTACTCAGCTGGTATCCCTTGCTAGTTTGCTGCTTGATCCGTACTATCGGACTTTTGCTGGTTTTCAGGCACTGGTTGAGAAGGATTGGCTAGCATTTGGTCATCCTTTCTCAGATCGGGTGAGCATGCCAACCATATGTGGAAGTGGAAATGTGCCAAGTGAGTTATCTAGACAGTATTCCACTGGGAGTTTTTCATCATCACCAGTGCGACAGTCAACAGGATCATTCATGTCTCAAACTCCGACTCCTACTACTACTCATGCACACACGTCAAACAACTATTCTCCCATATTTTTGCAGTGGGTTGATTGCGTTTCACAACTGATGCGGATGTATCCTTCTGCTTTCGAATTTTCCTCGGCTTTTCTGGTGGACTTGATAGACTCTGTGCTTTCCTGCCGCTTTGGAAACTTCTTGTGTAATAGTGAAAAGGAGAGACAGGTATGTGCTGTTTCAGAAGTTTGTGGGTGCTTGTGGACATACATGGCAGAGCTTCGTGCCTCGGAGGGAAGTTCTCATCATAACCTTTTCTATGATCCATCTAAATATGATGGCCCTCTAAAACCCCCAGCAGCAGCGTTAGCCCCAACTGTGTGGCCCCAGTTCCACCTCCGTTGGGCCTGCCCGTCAGAAGCCCAAGCGGGGGAGGTTGACTCACAATATAGGGAAATGGTCATCAAGTTCTCGGAAATGCAGAAGGAAAAAGAAGTGGCGGAAAGGAAAGCCAGAGAAATGACCGCTGCTATGGAGTCTGTGAATGCAGAGTTACGGAATGAGAGAAATCTTAACAGCTCAGCTATGGACTGGGCAAAAAGGGTAAGCAAGGAAAGTGAAGCCATGAAGCGAGCAATACAGTCCCTAGGATGTAAGGTTCATTTTTCTACCACTGGTGATCAAACAGTTGATATTCAAAACAACCTAATGGAAACTCCCCAGAGATTGTCTTATCATTCTCCTAGAAGTGCAGCGAGTAGTTTAGTGCAAGAAGGTGAGACAAATGATGTCTCCGTTTCTATCACAGTTATGCCCGAAGATGATGTTTCGAACAGTAATCCTCTTGGACGTGTTTGTGAAACACTATGCCCGTTAAGGACTAGAGATGGAGGGTGTAGATGGCCAGATGCAGGTTGTGCTCAGTTAAGTAGTCAATTTGTGGGATTAAAAGCGAACTTTGATGCATTTGATAAGCTTTCTATATATGATAGTTATTTCAAATCTGAGTGA 2577 45.6 MAAPKSRTARTTSSSLRGSFESERMEGAGSWEALEWTKIEPVSRSVSHVKLDCLLESEQIMAEGYGVVLVNTDEAGTLFVTNFRLLFLSEGTRDIIALGTIPLATIEKFSKIVVKAPSAPRPSEKTPTQRHLQVIGKDMRIIVFGFRPKTKQRRLVYEALLRCTKPTTLWDLYAFASGPSKYNNTNPKVRLLNEYFRLLGMGCRRALMSMIEDGSFTLSNNLWRITNINSNYAMCPTYPFALLVPKSITDEEVLQASTFRARCRLPVVSWCHPATGAVLARSSQPLVGLMMNMRSEKDEKLVAALCSQLAGGKESRRKLYICDARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRDSLARLRDYLDTHGATSSDGMSSFLRHGGWTWSGGNLSSMSASVSTLGDSGWLIHVQNVLAGSAWIAARVALESASVLVHCSDGWDRTTQLVSLASLLLDPYYRTFAGFQALVEKDWLAFGHPFSDRVSMPTICGSGNVPSELSRQYSTGSFSSSPVRQSTGSFMSQTPTPTTTHAHTSNNYSPIFLQWVDCVSQLMRMYPSAFEFSSAFLVDLIDSVLSCRFGNFLCNSEKERQVCAVSEVCGCLWTYMAELRASEGSSHHNLFYDPSKYDGPLKPPAAALAPTVWPQFHLRWACPSEAQAGEVDSQYREMVIKFSEMQKEKEVAERKAREMTAAMESVNAELRNERNLNSSAMDWAKRVSKESEAMKRAIQSLGCKVHFSTTGDQTVDIQNNLMETPQRLSYHSPRSAASSLVQEGETNDVSVSITVMPEDDVSNSNPLGRVCETLCPLRTRDGGCRWPDAGCAQLSSQFVGLKANFDAFDKLSIYDSYFKSE 858
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8108516 8114623 + Conep11aG0105500.1 Cone11ag1023 448275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1023 858 MobiDBLite consensus disorder prediction 1 21 - -
Cone11ag1023 858 Coils Coil 672 713 - -
Cone11ag1023 858 ProSitePatterns Tyrosine specific protein phosphatases active site. 442 452 IPR016130 GO:0016311(InterPro)
Cone11ag1023 858 ProSiteProfiles Myotubularin phosphatase domain. 185 654 IPR010569 -
Cone11ag1023 858 PANTHER MYOTUBULARIN-RELATED 21 791 IPR030564 GO:0004438(PANTHER)|GO:0106018(PANTHER)
Cone11ag1023 858 Gene3D - 65 164 IPR011993 -
Cone11ag1023 858 Pfam Myotubularin-like phosphatase domain 208 598 IPR010569 -
Cone11ag1023 858 SMART gram2001c 47 113 IPR004182 -
Cone11ag1023 858 MobiDBLite consensus disorder prediction 1 20 - -
Cone11ag1023 858 MobiDBLite consensus disorder prediction 508 539 - -
Cone11ag1023 858 CDD PTP-MTM-like 263 558 - -
Cone11ag1023 858 SUPERFAMILY PH domain-like 53 176 - -
Cone11ag1023 858 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 217 658 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0555 Cone-Chr18:2734967 Cone11ag1023 Cone-Chr11:8108516 0 transposed
Cone18ag0556 Cone-Chr18:2738858 Cone11ag1023 Cone-Chr11:8108516 6.17E-72 transposed
Cone11ag1023 Cone-Chr11:8108516 Cone18ag0554 Cone-Chr18:2734598 2.41E-35 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1023 K18081 - vvi:100252361 1285.78