Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1025 ATGTTGGCAATGGAGAAGGATTTTGATGCGAAGCTGGTGATTCAGGAGAATCCTTCAAATGTAGGAAGTAATGTTCAGAGATCTAAGAGCTTCTCGTTCCGGGCTCCTCAGGAGAATTTCACCATTCAGGATTTCGAATTGGGCAAGATATATGGTGTCGGTTCCTATTCCAAGGTTGTGAGAGCAAAGAAGAAGGACACAGGAGCTATATATGCAATGAAGATAATGGACAAAAAGTTCATTACAAAAGAAAATAAAACTGCTTACGTGAAATTGGAACGGATCGTGCTTGATCAGTTGAATCATCCCGGCATTATTCGCCTCTTTTTCACATTTCAAGATACCTTTTCACTCTATATGGCACTTGAATCGTGTGAAGGCGGAGAACTGTTTGATCAAATAAACAGGAAAGGTCGCTTACCAGAAGATGAAGCTCGTTTCTATGCTGCAGAAGCTGTGGATGCGCTTGAATACATACACAGCATGGGATTACTTCACAGAGACATCAAGCCAGAGAATTTGCTTCTTACTTCTGATGGTCATATCAAAGTTGCCGATTTTGGGAGTGTTAAGCCTATGCAGGATAGTCGAATCACTGTCCTTCCAAATGCGGCATCAGACGATAAAGCGTGTACATTTGTGGGGACAGCTGCTTATGTTCCGCCAGAAGTTCTTAATTCTTCTCCTGCAACTTTCGGAAATGACCTCTGGGCACTTGGCTGCACCTTATACCAAATGCTTTCAGGAACTTCCCCTTTCAAAGATGCAAGCGAATGGCTTATTTTTCAAAGAATCATAGCCCGAGATATAAGATTTCCAGATTACTTTTCTCCTGAAGCTAGAGACCTCATAGACCGCCTTTTGGACTTAGATCCGGGCAGGAGACCCGGGACAGGACCCAATGGTTATGCAGCACTTAAGATGCATCCTTTCTTCGAGGGGGTTAACTGGAATAATATAAGAGACCAAATGCCTCCAAAACTTGCTTTGGAATCATTGGTTAACGGGGATGATGGCTCTGATTCTTCACGGAATCCAACTCATATTGGTGATGGGAATAGTGGGTCTGCTTCGCCTTCTGATGGCTCCGCTCATGTGACCAGGATTGCTTCAATCGACTCCTTTGATTCAAAATGGCAACAATTCCTTGAGCCAGGAGAATCGGTGCTTATGATCTCGACGCTAAAGAAGCTTCAGAAGCTATCGAGCAAAAAAGTGCAACTTATCCTCACCAACAAACCAAAACTAGTATATGTGAACCCTTCGAAGTTGGTTGCTAGAAACATAGTTTGGTCCGATAATCCTATTGACCTCAACATCCAAGTGATTAGTCCTTCCACTTTCAAGATTTGCACGCCGAAAAAGATTATGTCATTTGAGGATGCAAAACAGAGAGGATCACTATGGAAGAAGGCAATCGAGTCGCTTCAAAACCGGTGA 1440 43.12 MLAMEKDFDAKLVIQENPSNVGSNVQRSKSFSFRAPQENFTIQDFELGKIYGVGSYSKVVRAKKKDTGAIYAMKIMDKKFITKENKTAYVKLERIVLDQLNHPGIIRLFFTFQDTFSLYMALESCEGGELFDQINRKGRLPEDEARFYAAEAVDALEYIHSMGLLHRDIKPENLLLTSDGHIKVADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDIRFPDYFSPEARDLIDRLLDLDPGRRPGTGPNGYAALKMHPFFEGVNWNNIRDQMPPKLALESLVNGDDGSDSSRNPTHIGDGNSGSASPSDGSAHVTRIASIDSFDSKWQQFLEPGESVLMISTLKKLQKLSSKKVQLILTNKPKLVYVNPSKLVARNIVWSDNPIDLNIQVISPSTFKICTPKKIMSFEDAKQRGSLWKKAIESLQNR 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8118512 8121516 - Conep11aG0105700.1 Cone11ag1025 448277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1025 479 MobiDBLite consensus disorder prediction 331 364 - -
Cone11ag1025 479 FunFam 3-phosphoinositide-dependent protein kinase 2-like 129 327 - -
Cone11ag1025 479 SUPERFAMILY PH domain-like 306 478 - -
Cone11ag1025 479 Pfam PH domain 377 478 IPR033931 -
Cone11ag1025 479 SUPERFAMILY Protein kinase-like (PK-like) 24 332 IPR011009 -
Cone11ag1025 479 Gene3D Phosphorylase Kinase; domain 1 43 128 - -
Cone11ag1025 479 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 326 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Cone11ag1025 479 FunFam 3-phosphoinositide-dependent protein kinase 2-like 43 128 - -
Cone11ag1025 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag1025 479 MobiDBLite consensus disorder prediction 336 364 - -
Cone11ag1025 479 Gene3D Transferase(Phosphotransferase) domain 1 129 326 - -
Cone11ag1025 479 CDD STKc_PDK1 43 312 IPR039046 GO:0004674(InterPro)
Cone11ag1025 479 SMART serkin_6 45 312 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag1025 479 Gene3D - 354 479 IPR011993 -
Cone11ag1025 479 Pfam Protein kinase domain 46 311 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag1025 479 ProSiteProfiles Protein kinase domain profile. 45 312 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag1025 479 FunFam 3-phosphoinositide-dependent protein kinase 1 350 479 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1025 Cone-Chr11:8118512 Cone3ag1262 Cone-Chr3:31437606 8.54E-54 dispersed
Cone1ag1396 Cone-Chr1:56734111 Cone11ag1025 Cone-Chr11:8118512 2.10E-255 wgd
Cone11ag1025 Cone-Chr11:8118512 Cone11ag1361 Cone-Chr11:9912074 1.76E-25 wgd
Cone11ag1025 Cone-Chr11:8118512 Cone18ag0217 Cone-Chr18:1076442 1.81E-23 wgd
Cone11ag1025 Cone-Chr11:8118512 Cone3ag0209 Cone-Chr3:1113014 7.87E-37 wgd
Cone11ag1025 Cone-Chr11:8118512 Cone5ag0387 Cone-Chr5:1653954 3.36E-254 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81903 PF12697 Abhydrolase_6 3.30E-23 CL0028 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1025 K06276 - mdm:103439475 791.186