Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1088 ATGGCGCCTATTGATCCTCACTCATTCACTGACTCCTCCCACCCACTGACCACAAACATCTCTCTCTCCCTCTTTTTCGACTTCCACTCCTCCATCATTTACGCTTCAGCTCTAATCTCTCTCCCAAATCCTCATACCGGCTCGCTCTCTCTCGACGCTCGATCTCTCACAATCCATTCCGTCATCGACCCCCAATCTCGATCTCCGATCCCGTTTTCCCTCTCTCCGGCCGACTCTATCAAAGGCAACCACCTCACCGTCTGTCTCTCAAACCACTCCTCGTTCCTCATTATTTACAACACTTCCCCTTCATCTTCCGCCCTGCAATGGCTTCTCCCTCCTCAAACCTTCAACAAGACCTTCCCCTTCGTCTACACTCAATGCCAATCCATCCACGCCCGCTCCGTCTTCCCATGCCAAGACACTCCAGCTGCTCGTATAAAATACACAGCTCGTTTGAACATTCCTCGGCAGTTATCAGCAGTAATGGCTGCTCAACATGTGGACCGCCGGCCGCCAGTGTCTGGCGAGGGATCGGAGCTAGCCGCAGGAGCTGACTCTCAGTGGTGTGCAGAAGGTAGGGTGGTAGAGGAATTCGTCATGGATCAACCTGTCCCGCCGTATTTATTTGCATTTGCTGTAGGGGAGCTAGGATTCAGGGAGGTGGGGCCCAGGACTAGGGTTTATGCGGAGGCGGTTCAAGCGGTGCTCGACTCAGCAGCTAGGGAGTTTTCCGGAACAGAGGAGATGATAAGGCAAGGGGAGATGCTGTTTGGGGCTTATGAATGGGAGAGGTTTGATTTACTGGTTTTGCCTCCAAGTTTTCCGTATGGAGGGATGGAGAATCCAAGGATGGTGTTCTTGACGCCTACCGTGATTAAAGGCGATGCGAGTGGGGCCCAGGTGGTGGCTCATGAGCTTGCCCATAGCTGGACTGGAAACTTGATCACTAACAAGAATAATGAACATTTCTGGTTGAATGAGGGTTTTACTACATATGCCGAGAGGAGAATTGTGGAGGTTGTGCAAGGAGAGGACCGGGCTGTACTGAATATTGGAATAGGTTGGAGGGGTTTAAACGAGGAAATGGAAAGATTCAAGGATAACTTAGAGTTTACAAAGCTTAAAACAAAGCAGGAAGGAGTAGACCCAGATGATGTTTACTCTCAAGTACCCTATGAGAAAGGTTTCCAATTCCTATGGCGCATTGAACGCCAGGTTGGAAGACCTGCATTTGATGAATTCATAAAGAAATATATATCTACATTCAAGTTCAAGTCGATTGATACAGAGACATTCCTTGATTTCCTGAAAGCAAACATTCCGGGAATAGAGAAAGCGGTCGATTTGTATCTTTGGACAGAAGGGACTGGAATCCCTCCAGATGCATATGAACCGGTTTCCAATCTATACACAAAGATTGTAACTCTGGCAAATGAATTCAAGCTTGGTCGAATGCCAAGGGAAGATGAAGTTTCTGATTGGCAGGGGCAAGAATGGGAACTCTACTTGGAAAACTTACCCAAATCCATTGAAGCTTCACAGATCCTTGGTTTAGATGCCCGTTATCAGCTTTCGGAATCGAAAGATTATGAGGTGAAGGTGGCATTTCTTCAACTCGCAATTTCAGCCAAGTGTAGGGATCATTATCCTGAGGTGGAGAAAACGTTGAAGGAAGTTGGGCGAATGAAGTATCTTCGCCCGCTTTACACTGCTCTTGTTCAAGGCACCGGAAATGAAGAAGAAAAGCTTCTCGCGAAAAGGGTGTTTTCTGAGGCTAAGGATTGTTATCACCCTATAGCACAAGGGGTTGTTGAATCTATATTTTCTAAGCACCTGTAA 1842 47.61 MAPIDPHSFTDSSHPLTTNISLSLFFDFHSSIIYASALISLPNPHTGSLSLDARSLTIHSVIDPQSRSPIPFSLSPADSIKGNHLTVCLSNHSSFLIIYNTSPSSSALQWLLPPQTFNKTFPFVYTQCQSIHARSVFPCQDTPAARIKYTARLNIPRQLSAVMAAQHVDRRPPVSGEGSELAAGADSQWCAEGRVVEEFVMDQPVPPYLFAFAVGELGFREVGPRTRVYAEAVQAVLDSAAREFSGTEEMIRQGEMLFGAYEWERFDLLVLPPSFPYGGMENPRMVFLTPTVIKGDASGAQVVAHELAHSWTGNLITNKNNEHFWLNEGFTTYAERRIVEVVQGEDRAVLNIGIGWRGLNEEMERFKDNLEFTKLKTKQEGVDPDDVYSQVPYEKGFQFLWRIERQVGRPAFDEFIKKYISTFKFKSIDTETFLDFLKANIPGIEKAVDLYLWTEGTGIPPDAYEPVSNLYTKIVTLANEFKLGRMPREDEVSDWQGQEWELYLENLPKSIEASQILGLDARYQLSESKDYEVKVAFLQLAISAKCRDHYPEVEKTLKEVGRMKYLRPLYTALVQGTGNEEEKLLAKRVFSEAKDCYHPIAQGVVESIFSKHL 613
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8499372 8502132 - Conep11aG0112300.1 Cone11ag1088 448340

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1088 613 PANTHER LEUKOTRIENE A-4 HYDROLASE 2 612 IPR034015 GO:0005829(PANTHER)
Cone11ag1088 613 Pfam Leukotriene A4 hydrolase, C-terminal 495 608 IPR015211 GO:0008237(InterPro)|GO:0008270(InterPro)
Cone11ag1088 613 Gene3D Neutral Protease Domain 2 315 464 IPR027268 -
Cone11ag1088 613 CDD M1_LTA4H 5 453 IPR049980 -
Cone11ag1088 613 Pfam Peptidase family M1 domain 250 439 IPR014782 GO:0008237(InterPro)|GO:0008270(InterPro)
Cone11ag1088 613 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 4 216 IPR042097 -
Cone11ag1088 613 SMART Leuk_A4_hydro_C_2 469 609 IPR015211 GO:0008237(InterPro)|GO:0008270(InterPro)
Cone11ag1088 613 FunFam Leukotriene A(4) hydrolase 315 463 - -
Cone11ag1088 613 PRINTS Membrane alanyl dipeptidase (M1) family signature 134 149 IPR001930 GO:0006508(InterPro)
Cone11ag1088 613 PRINTS Membrane alanyl dipeptidase (M1) family signature 321 333 IPR001930 GO:0006508(InterPro)
Cone11ag1088 613 PRINTS Membrane alanyl dipeptidase (M1) family signature 275 285 IPR001930 GO:0006508(InterPro)
Cone11ag1088 613 PRINTS Membrane alanyl dipeptidase (M1) family signature 302 317 IPR001930 GO:0006508(InterPro)
Cone11ag1088 613 Pfam Peptidase M1 N-terminal domain 26 162 IPR045357 -
Cone11ag1088 613 SUPERFAMILY ARM repeat 484 609 IPR016024 -
Cone11ag1088 613 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 224 460 - -
Cone11ag1088 613 Gene3D tricorn interacting facor f3 domain 17 215 IPR042097 -
Cone11ag1088 613 FunFam Leukotriene A(4) hydrolase 216 314 - -
Cone11ag1088 613 Gene3D - 216 314 - -
Cone11ag1088 613 Gene3D - 468 609 IPR038502 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1088 K01254 - - vvi:100243305 1049.65
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1088 Cone-Chr11:8499372 Cone18ag0490 Cone-Chr18:2382990 2.16E-70 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1258 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone11ag1088 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Vvi13g193 Blo04g00087 . . . . . . . . . . . . . . Cpe13g00825 . . . . . . . . . . . . . . . . . Cone11ag1088 Cone18ag0490 Lsi02g01690 . . . . . . . . . . . . Cmo04g02727 Cmo15g00440 Cma04g02606 Cma15g00428 Car04g02512 Car15g00400 . Cpe01g02263 . . . . . . . . . . . . . . . Csa05g01786 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006938 1 1 1 1 1 1 2 1 1 2 1 1 2 3 1 2 1 1 2 1 1 1 1 1 1 1 1 1 1 1 37