Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1101 ATGAAAGAAAATTTCGAAACCGCAGAATCAATCATCACGAAATGGGACCCAAACTCCGCTCGACCATTTCCACAACCCTCCTCTCTCTTCCGCCATAACCGGAAAGAGTCCCAAGACTTCCTCAACTCCACCGAAAACTTATGGCGAGTCATGAACTTTCTAGTCTCCGAAAACTCGTCATCCGATAAGCTTGTTCTCGCTCAAAAGCTAATGCAAGTCGCCATGAAAAGACTCAAAAAGGAGTTCTTTCATATATTGTCTGAAAACCGGGAGCACCTTGACCCGGAATCAGTTTCAGGCCGATCCTCAAATGCTTCGATCACTTCCGACAGTGAAGAAAAAGTTCGACCAAATAACAGGACAATCAGCGAGGAAGAGAGAATTGTCCAAATTGCTATGTCGGATTTGAAGTCAATAGCAGATTGTATGATTGGCGCTGGCTATGGAAAAGAGTGTGCTAAGATATACAAAACTGTCCGAAAATCCATACTAGAAGAAGCATTACATGATCTTGGATCAATCCAGCAGCTCAAATCTTCACAGATTCAGAAAATGAGTAGAGAATCATTTGAGCATCAAATTAATAAATGGATCAAAGCTGTGAGGAATTCTGTGAGAAATATTTTCAAAGGAGAAAGAATTCTCTGTGACTATGTTTTTTCGGCTTCTAAGACAATCCGAGAATCATGCTTTTTTCACATAACCAACTTAGAAGCAATCAATCTTTTCAAATTCCCAGAACTTATAACAAAGAGTACTAGTAAGAGATCATCACCGGAGAAGATTTTTCCTCTATTGCAAATCTATGAAGCAATGTCTCAACTTTGGCCAGAAATAGAATCAGTTTTCAGCTCAGAATCAACCTTACCTATTAAATTACAAGCTCTTTCATCAATAATCAAACTTGGGGAATCTGTTCGGGAAATCCTATCTGAATTTGAATCGACAATTCAAAAGGACTCGTCTAAGACTCCGGTTTTAGGGGGTGGAGTAGACCCTTTGACCAAATCATCAATGGTTTACATTTCTTCTCTTGCATTTTACAGTGAAGTTCTCTTCGGAATCATTTCGGATAATCCACTACCCAGGAGTTCACCTTTGCCAGAGTCCTATTTTCCGAACCCAGCCGGGAGTGGAGAACTATCTACTCACTTGGCTTGGCTCATTTTCGTTCTTCTGTGCAAGGTTGATAGAAAAGCTGATCTCTACAAAGATGTCTCTTTGTCGTATATTTTTCTGGCGAATAATCTTCACTTCATTGTAGAGACAGTGCGTAAAACCTGCCTTAAACCTATTCTTGGTGATGATTGGATATCTACACACACAAGGAGGGTTACAAAATATGCATCATACTATGATTCTCTAGCATGGGGCAAGGTTTATTCATCCTTGCCAGATAAAAATATTCCGGAAATTTCACCTCAAGTCATAAAAGAATGTTTTAACAGGTTTAATGAAGCATTTCAAGAAGAATACAAGAAGCAAACATCATGGCAAGTAGAGGATGGGAAATTAAGAGATGAGTTAAAGGTATCCATTGCCAGTAAGCTTGTACCGGCTTATCGAGAATTTTACGAATCAAGCTTGGCGAGATTAAAAGAGGAGAAGGATTTGGAAATGTGGGTAAGAATTAAACCAGAAGATTTGGGGAATTACTTGTCTGATTTGTTCCATGGGGCCACTTATTCGGGTTTTACTTCATCTTCATCTTCATCTTCATCATCGTCATCTTTAACAATGAGATGGCTACGGTCATTATCTCACCGGAAAGTATCACCTTAA 1782 39.39 MKENFETAESIITKWDPNSARPFPQPSSLFRHNRKESQDFLNSTENLWRVMNFLVSENSSSDKLVLAQKLMQVAMKRLKKEFFHILSENREHLDPESVSGRSSNASITSDSEEKVRPNNRTISEEERIVQIAMSDLKSIADCMIGAGYGKECAKIYKTVRKSILEEALHDLGSIQQLKSSQIQKMSRESFEHQINKWIKAVRNSVRNIFKGERILCDYVFSASKTIRESCFFHITNLEAINLFKFPELITKSTSKRSSPEKIFPLLQIYEAMSQLWPEIESVFSSESTLPIKLQALSSIIKLGESVREILSEFESTIQKDSSKTPVLGGGVDPLTKSSMVYISSLAFYSEVLFGIISDNPLPRSSPLPESYFPNPAGSGELSTHLAWLIFVLLCKVDRKADLYKDVSLSYIFLANNLHFIVETVRKTCLKPILGDDWISTHTRRVTKYASYYDSLAWGKVYSSLPDKNIPEISPQVIKECFNRFNEAFQEEYKKQTSWQVEDGKLRDELKVSIASKLVPAYREFYESSLARLKEEKDLEMWVRIKPEDLGNYLSDLFHGATYSGFTSSSSSSSSSSSLTMRWLRSLSHRKVSP 593
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8582489 8584270 - Conep11aG0113600.1 Cone11ag1101 448353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1101 593 SUPERFAMILY Cullin repeat-like 6 558 IPR016159 -
Cone11ag1101 593 MobiDBLite consensus disorder prediction 93 119 - -
Cone11ag1101 593 Pfam Exocyst complex component Exo70 N-terminal 5 88 - -
Cone11ag1101 593 Gene3D Exocyst complex component Exo70 25 564 - -
Cone11ag1101 593 PANTHER EXOCYST COMPLEX PROTEIN EXO70 4 559 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cone11ag1101 593 Pfam Exo70 exocyst complex subunit C-terminal 196 555 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cone11ag1101 593 MobiDBLite consensus disorder prediction 98 112 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1101 Cone-Chr11:8582489 Cone20ag1348 Cone-Chr20:8666061 3.25E-83 dispersed
Cone1ag0674 Cone-Chr1:6316183 Cone11ag1101 Cone-Chr11:8582489 2.03E-187 wgd
Cone10ag0284 Cone-Chr10:1348849 Cone11ag1101 Cone-Chr11:8582489 1.83E-168 wgd
Cone11ag1101 Cone-Chr11:8582489 Cone11ag1266 Cone-Chr11:9409923 7.88E-174 wgd
Cone11ag1101 Cone-Chr11:8582489 Cone13ag1312 Cone-Chr13:9740457 1.01E-148 wgd
Cone11ag1101 Cone-Chr11:8582489 Cone18ag0321 Cone-Chr18:1595951 4.17E-175 wgd
Cone11ag1101 Cone-Chr11:8582489 Cone18ag0474 Cone-Chr18:2306911 0 wgd
Cone11ag1101 Cone-Chr11:8582489 Cone19ag1300 Cone-Chr19:8771675 4.23E-151 wgd
Cone11ag1101 Cone-Chr11:8582489 Cone3ag0313 Cone-Chr3:1592344 3.36E-163 wgd
Cone11ag1101 Cone-Chr11:8582489 Cone5ag1180 Cone-Chr5:5298449 1.28E-180 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1101 K07195 - rcu:8285767 642.114