Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1108 ATGGAGATAACGGACGGCTCCCCGAGCTCGACGAACTTGGCCGACTCTGGCGCAGGAGGAGCCGCTCCATCTATGCCTTCGACGACCCGACCCGTTAAGATCATTCAGTTGCAGCATCCGAATGCGTCGTCTTCTTCTTCCTCTAATGCTGCCGCTTTGTTTTCCAAGTGGACGGAGAAAATTCAGCGGCTGACATGGATTGAATGGATGGAGATCCTGCTGCCTTGCTTCCGTTGGATGAGAACCTACAAATGGCGGGAATATTTGCAGGTAGATCTCGCGGCCGGGGTTACTGTTGGAATTATGCTTGTTCCGCAGTCAATGTCTTATGCAAAGCTGGCTGGGCTTGAAGCAATATATGGACTCTACTCTGCGTTTGTGCCCTTATTTGTGTATGCCATATTCGGTTCATCTCGCCAGCTTGCAGTTGGTCCAGTAGCATTGGTTTCCCTTTTGGTTTCTAATGTCTTAGGTGCGATTGTTGATTCTTCTGATGCATTATACACGGAGCTTGCAATATTGCTGGCACTTATGGTTGGAGTGTGTGAATGCATAATGGGTCTATTGAGGCTTGGATGGATTATTCGTTTTATCAGTCATTCTGTGATTTCTGGCTTTACATCAGCTTCAGCCATTGTTATTGCATTATCTCAAATTAAGTACTTTCTTGGATACTCTGTTGCAAGAAGTAGCAAAATTGTGCCATTGATTGAGAGCATAATTGCCGGAGCAGATGGGTTTCTATGGCAACCTTTCGTGATGGGATCGATCCTCCTTGCAATACTTCTGACTATGAAACACTTGGGGAAAACAAGGAAGTACTTGCGATTTATGAGAGCAGCAGGTCCCCTCACAGCAGTTGTTTTGGGAACAGTTTTTGTGGAGATATTCAATCCATCTTCTATTTCTTTGGTTGGAGATATTCCTCAGGGCCTTCCATCGTTCTCTATTCCTAAGGGTCTCGAATATGTGGTGACATTGATTCCAACAGCCCTTCTTATTACTGGTGTAGCTATACTGGAATCTGTCGGGATAGCCAAAGCATTAGCAGCAAAGAATGGCTATGAGTTGGATTCAAATCAAGAGCTCTTTGGTCTCGGGGTATCCAACATAGTTGGTTCATTTTTCTCAGCCTATCCAACAACAGGTTCATTTTCTAGATCGGCTGTGAATCATGAAAGTGGAGCAAAAACTGGCTTATCTGGGATTGTTATGGGAATCATAATAGGCTGTGCCCTTCTCTTCTTGACTTCATTGTTTGAAGATATACCTCAGTGTGCACTGGCTGCCATTGTGATCTCTGCTGTCATGGGTCTGGTTGATTACCATGAGGCTATCTTTTTGTGGCGTGTAGATAAGAAAGATTTCCTTCTTTGGACAATTACTAGCACTACAACATTATTTCTTGGTATCGAGATTGGAGTCCTAGTTGGGGTGGGTTTTTCACTTGCTTTTGTCATCCATGAATCTGCAAATCCACACATTGCTGTCTTGGGTCGTCTTCCAGGCACCACTGTCTATAGAAATGTTAGTCAGTACCCAGAAGCATATACTTATAATGGAATTGTAATTGTTCGGGTCGATGCACCGATGTACTTTGCAAACATAAGCTACATAAAAGATAGGTTACGAGAATATGAAGTTGAAGTCGATAGATCTTCTAGCCGTGGACCAGAAGTTGAAAGAGTCTATTTCGTAATTATAGAGCTGGCACCTGTTACGTATATAGACTCTAGTGCTGTTCAAGCCTTGAAAGACTTGCATCAAGAGTACAAACTGCGTGACATTCAAATTGCCATTTCAAATCCGAACAGAGAAGTTTTGCTGACCTTATCGAAATCAGGTGTGGTAGAGCTGATTGGCAAGGAGTGGTACTTTGTAAGAGTCCACGATGCTGTTCAAGTTTGCCTTCAACATGTTGAGAGCTTAAGAGGAACAGAGAAGAAAGCTGAGTCCATACTCGAAGATAAACCGAGTTTCTTGCAGAGGTTATTGAAAAAGAGAAGCGCGGATTCATCAATCAGCGAGTTGGAGTCGGGTGGTCAAAAATCCGACTCTCAATTAGAGCCATTGCTGTCTCGTAAGCCCTGA 2091 43.81 MEITDGSPSSTNLADSGAGGAAPSMPSTTRPVKIIQLQHPNASSSSSSNAAALFSKWTEKIQRLTWIEWMEILLPCFRWMRTYKWREYLQVDLAAGVTVGIMLVPQSMSYAKLAGLEAIYGLYSAFVPLFVYAIFGSSRQLAVGPVALVSLLVSNVLGAIVDSSDALYTELAILLALMVGVCECIMGLLRLGWIIRFISHSVISGFTSASAIVIALSQIKYFLGYSVARSSKIVPLIESIIAGADGFLWQPFVMGSILLAILLTMKHLGKTRKYLRFMRAAGPLTAVVLGTVFVEIFNPSSISLVGDIPQGLPSFSIPKGLEYVVTLIPTALLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNIVGSFFSAYPTTGSFSRSAVNHESGAKTGLSGIVMGIIIGCALLFLTSLFEDIPQCALAAIVISAVMGLVDYHEAIFLWRVDKKDFLLWTITSTTTLFLGIEIGVLVGVGFSLAFVIHESANPHIAVLGRLPGTTVYRNVSQYPEAYTYNGIVIVRVDAPMYFANISYIKDRLREYEVEVDRSSSRGPEVERVYFVIIELAPVTYIDSSAVQALKDLHQEYKLRDIQIAISNPNREVLLTLSKSGVVELIGKEWYFVRVHDAVQVCLQHVESLRGTEKKAESILEDKPSFLQRLLKKRSADSSISELESGGQKSDSQLEPLLSRKP 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8619655 8624396 - Conep11aG0114300.1 Cone11ag1108 448360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1108 696 PANTHER SULFATE TRANSPORTER 62 638 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone11ag1108 696 FunFam Sulfate transporter 31 492 639 - -
Cone11ag1108 696 ProSiteProfiles STAS domain profile. 512 636 IPR002645 -
Cone11ag1108 696 SUPERFAMILY SpoIIaa-like 514 636 IPR036513 -
Cone11ag1108 696 MobiDBLite consensus disorder prediction 673 696 - -
Cone11ag1108 696 NCBIfam sulfate permease 75 632 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cone11ag1108 696 Pfam Sulfate permease family 89 462 IPR011547 GO:0016020(InterPro)
Cone11ag1108 696 MobiDBLite consensus disorder prediction 1 17 - -
Cone11ag1108 696 MobiDBLite consensus disorder prediction 1 27 - -
Cone11ag1108 696 Gene3D STAS domain 492 639 IPR036513 -
Cone11ag1108 696 Pfam STAS domain 513 632 IPR002645 -
Cone11ag1108 696 ProSitePatterns SLC26A transporters signature. 118 139 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cone11ag1108 696 MobiDBLite consensus disorder prediction 674 689 - -
Cone11ag1108 696 CDD STAS_SulP_like_sulfate_transporter 513 629 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1108 Cone-Chr11:8619655 Cone7ag1578 Cone-Chr7:10808977 2.68E-125 dispersed
Cone11ag1108 Cone-Chr11:8619655 Cone18ag0469 Cone-Chr18:2277303 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1108 K18059 - mdm:103434544 1092.41