Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1110 ATGATGGATACCCATGAAAAGCCTCTAAGAACCGGGGAGATAGTAAGAAATTCCGGAAACAAAACTACAAATGGGCCTCCTCCCTCCACCCCCGGTTTCTATACGCCGGTGGTCGGCTCTGCCGCTTCTCCGGCAACCTCAGCTACTAAGCCTCCAAAGATCCCTCCCGAGCCAAGTAAACCAAGTGCTCTGAAAAGGTCAGTCTACTCTAAACCAAAATCAAGATTTTGGGAACAACCAGTTCGCATAGACTCCAACTTGTTTGAAGAAAAGCTCAAGCTGACCTCGAGAGAACAAATCGCATCTCCTGCTCCACTTGATGATCAAAATGAGGAGGAAGATGAAGAGGCCGAGATCTTCGAGGAAGTAGAGTGGGGAGAGAAGCGCCAAAGAGTAAAGTTCAAAACTTTAGTCAAATTGGTTTTAGCTTTTTGCATTACAGGTTGCTTAATTGGCAGCTTAACGGTTCAAAAATTCAGAAACTCTTTTCTTTGGCGTTTAGAGAGTTGGAAATGGTGTTTTTTCTTAACGGTAACATTCTGTGGCCTTGTGGTTACAAGTTGGTTCACCCATTTCATAGTTTTCATCATTGAAATGAACTTCCTCTTAAGAAAGAAACTTCTCTATTTTGTTTATGGATTGAAAAAAAGTGTCCAAGTTACCGTTTGGTTAGCTTTTGTTCTTGGTACATGGGTGCTTTTATTCCATCATGGGCCTAGTAGATCTCAAAGATCAAAAACTGCTAATGTGATTTTAGTTGATATAACATGGACTTTAGTATCATTCTTTATCGGGGCAATTCTATGGTTGTTTAAAACCCTTTTTCTCCAAATCATAGCATCAAATTTCCATATGAACCAATATTTCGATAGAATCCATGAAACTATCTTTCATCAGTATGTTCTGCATTCCCTCTCGGGCCCGGCTCTTATAGAAGAGGCAGAGAGGGTAGGGAGGCCGGTTAGTAGTGGTCATTTGAGTCTCAGAAGTAAGAAGAAGAATAAAGGTGGGAAGGAGGAGGTGATTGATATGGGAAAGCTTCATAGGATGAAGAGAGAAAATGTCTCAGCTTGGACTATGAAAGTCTTAGTCGATGCGGTTATGAATTCGGAGTTGTCTACGGTTTCCAATGCATTGGATAAATGTATTGGAAATGGAGAAGAGCCAAGAGATATTGAGATTACTAATGAGATGGAAGCAATTGCAGCTGCTTATAAAATTTTCAAGAATGTTGCTCATCATGCTAACAACTATGTTGAGGAAGATGATCTATTGAGGTTCATGATTAAGGAAGAAGTGGGTCTTGTATTATCACTCTTTGAAGGACGAATCAACAAAAAATCTCTTGTCAATTGGGTGGTGAAGGTATGCCAGGGTCGGAAAATGCTAGCACATTCTCTAAACGACACGAAAACGGCTGTCAAGCAACTGGACAAGCTCGTGAGGGTGATTGTTATCATAACAACGGTTATCATCTGGCTTTTATTAATGGAAATTGCAACAACAGAAGTACTTATTGTCCTAACTTCTCAGCTTGTGGTTGCTGCTTCCGTGTTTGGGGACACTTGTATGACCACTTTTGAAGCCCTTATTTTTGTTTTTGTCATGCATCCATTTGATGTTGGGGATCGATGTGTCGTTGACGGCGTTCAGATGACGGTTGAAGAGATGAATATATTGACGACAGTGTTCTTGAAGCTGAATAATGAAAAGGTTTACTACCCAAACTCCGTTTTGGCTACAAAGCCAATCGAAAACAAAATTCCAAACAAGATTGCATTTGGAGGAAAATTCTCAGCAGTGGTATCCGAACCGAACCATAGTGCAGTGGTGAAGGAGATTGAACAAAACATAAGCACTAGCCTGTCTCTGTCAGAATATGACATTGAGTTATCCTTAAACTTCAATGTTACAATCATGCTGAGGCTCGAGCTTTCTACTCATGCTGAAGCAATAAAATCATTCACTGGGACCAAGAAAAAACTGTTACAGTATTAA 1998 40.54 MMDTHEKPLRTGEIVRNSGNKTTNGPPPSTPGFYTPVVGSAASPATSATKPPKIPPEPSKPSALKRSVYSKPKSRFWEQPVRIDSNLFEEKLKLTSREQIASPAPLDDQNEEEDEEAEIFEEVEWGEKRQRVKFKTLVKLVLAFCITGCLIGSLTVQKFRNSFLWRLESWKWCFFLTVTFCGLVVTSWFTHFIVFIIEMNFLLRKKLLYFVYGLKKSVQVTVWLAFVLGTWVLLFHHGPSRSQRSKTANVILVDITWTLVSFFIGAILWLFKTLFLQIIASNFHMNQYFDRIHETIFHQYVLHSLSGPALIEEAERVGRPVSSGHLSLRSKKKNKGGKEEVIDMGKLHRMKRENVSAWTMKVLVDAVMNSELSTVSNALDKCIGNGEEPRDIEITNEMEAIAAAYKIFKNVAHHANNYVEEDDLLRFMIKEEVGLVLSLFEGRINKKSLVNWVVKVCQGRKMLAHSLNDTKTAVKQLDKLVRVIVIITTVIIWLLLMEIATTEVLIVLTSQLVVAASVFGDTCMTTFEALIFVFVMHPFDVGDRCVVDGVQMTVEEMNILTTVFLKLNNEKVYYPNSVLATKPIENKIPNKIAFGGKFSAVVSEPNHSAVVKEIEQNISTSLSLSEYDIELSLNFNVTIMLRLELSTHAEAIKSFTGTKKKLLQY 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8653799 8656508 - Conep11aG0114500.1 Cone11ag1110 448362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1110 665 MobiDBLite consensus disorder prediction 1 69 - -
Cone11ag1110 665 Gene3D - 538 586 IPR023408 -
Cone11ag1110 665 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 45 586 IPR016688 GO:0005886(PANTHER)|GO:0006820(PANTHER)|GO:0008381(PANTHER)|GO:0050982(PANTHER)
Cone11ag1110 665 Pfam Mechanosensitive ion channel, beta-domain 531 586 IPR006685 GO:0016020(InterPro)|GO:0055085(InterPro)
Cone11ag1110 665 SUPERFAMILY Sm-like ribonucleoproteins 526 586 IPR010920 -
Cone11ag1110 665 FunFam Predicted mechanosensitive ion channel 538 586 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1110 Cone-Chr11:8653799 Cone4ag1693 Cone-Chr4:12597498 1.75E-298 dispersed
Cone11ag1110 Cone-Chr11:8653799 Cone18ag0468 Cone-Chr18:2270743 2.61E-295 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1110 K22048 - mdm:103440894 622.854