Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1115 ATGATAACGACGGCGTTTGGGGTATCATCAGGAGTGTCAGTATGGAACGCACTGGTATTAGAGATAATGATGATGTTTGGGCTGGTATACACGGTGTATGCAACGGCGGTAGATCCAAAGAAGTGCGACGTGGGAATTGTTGTGCCCATTGCAATTGGGCTTATTGTGGGCGCTAACATTTTAGTGGGCGGGGCTTTTGACGGTGCATCAATGAACCCAACAGTCGCTTTTGGGCCTTCTGTGATCAGCTGGACTTGGACTAATCATTGGGTCTACTGA 279 48.39 MITTAFGVSSGVSVWNALVLEIMMMFGLVYTVYATAVDPKKCDVGIVVPIAIGLIVGANILVGGAFDGASMNPTVAFGPSVISWTWTNHWVY 92
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8673968 8674246 + Conep11aG0115000.1 Cone11ag1115 448367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1115 92 PANTHER AQUAPORIN-8 3 92 IPR034294 GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER)
Cone11ag1115 92 Pfam Major intrinsic protein 8 92 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone11ag1115 92 SUPERFAMILY Aquaporin-like 5 92 IPR023271 -
Cone11ag1115 92 PRINTS Major intrinsic protein family signature 20 38 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone11ag1115 92 PRINTS Major intrinsic protein family signature 53 75 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone11ag1115 92 PRINTS Major intrinsic protein family signature 90 92 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone11ag1115 92 Gene3D Glycerol uptake facilitator protein. 1 92 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1115 Cone-Chr11:8673968 Cone1ag0665 Cone-Chr1:6272582 2.67E-47 dispersed
Cone11ag1115 Cone-Chr11:8673968 Cone18ag0465 Cone-Chr18:2246575 8.61E-52 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1115 K09873 - vvi:100250080 157.147