Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone11ag1115 | ATGATAACGACGGCGTTTGGGGTATCATCAGGAGTGTCAGTATGGAACGCACTGGTATTAGAGATAATGATGATGTTTGGGCTGGTATACACGGTGTATGCAACGGCGGTAGATCCAAAGAAGTGCGACGTGGGAATTGTTGTGCCCATTGCAATTGGGCTTATTGTGGGCGCTAACATTTTAGTGGGCGGGGCTTTTGACGGTGCATCAATGAACCCAACAGTCGCTTTTGGGCCTTCTGTGATCAGCTGGACTTGGACTAATCATTGGGTCTACTGA | 279 | 48.39 | MITTAFGVSSGVSVWNALVLEIMMMFGLVYTVYATAVDPKKCDVGIVVPIAIGLIVGANILVGGAFDGASMNPTVAFGPSVISWTWTNHWVY | 92 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8673968 | 8674246 | + | Conep11aG0115000.1 | Cone11ag1115 | 448367 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone11ag1115 | 92 | PANTHER | AQUAPORIN-8 | 3 | 92 | IPR034294 | GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER) | |
Cone11ag1115 | 92 | Pfam | Major intrinsic protein | 8 | 92 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone11ag1115 | 92 | SUPERFAMILY | Aquaporin-like | 5 | 92 | IPR023271 | - | |
Cone11ag1115 | 92 | PRINTS | Major intrinsic protein family signature | 20 | 38 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone11ag1115 | 92 | PRINTS | Major intrinsic protein family signature | 53 | 75 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone11ag1115 | 92 | PRINTS | Major intrinsic protein family signature | 90 | 92 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone11ag1115 | 92 | Gene3D | Glycerol uptake facilitator protein. | 1 | 92 | IPR023271 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag1115 | Cone-Chr11:8673968 | Cone1ag0665 | Cone-Chr1:6272582 | 2.67E-47 | dispersed | |
Cone11ag1115 | Cone-Chr11:8673968 | Cone18ag0465 | Cone-Chr18:2246575 | 8.61E-52 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone11ag1115 | K09873 | - | vvi:100250080 | 157.147 |