Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1129 ATGGGAAGGAAATTTTGTGACCGGACGGTACAAAGTGATGTCAAGCTCTGGACATTCGAAATCAGAGCAGGTCCTAATAACAAGCCAATGATTGTAGTGAGATATAAATGTGAAGAAAGACTAATTTTCGCAGAGCAAATTGCTGCCATGATCCTTACGAAGATGCGTGAGATTTCCGAGACATTTGTGGGTTCAACTGTAAAGGATGCTGTTATTACTGTCCCCGCCTACTTCAATAATGCACAACGTCAAGCCACGAAAGATGCTGGAATCATAGCCGGCTTCAATGTTAAGCGTATAATCAACGAACCAACTGCCTCTGCTATTGCTTATGGCTTTGACAAGAAAAAGGCAGGTCAGATGATCGGCCAGAAGATTATTCTCATTTTCGATTTTGGTTGTGGGACTTTGGATGTGTCTCTGCTCACAGTTCAAGATGGTGTGTTCGGAGTGATTTCAACCGAAGGAAACACTCATCTGGGAGGTGAGGACTTCGATTACATATTGGCCGAGTTTTTCGCCAAGGAATTTGAAAGTAAGCATAAGGAGGATATAAGCAGAAACCCAAGAGCTCTTGCAAGGGTTGAAAAGCGCTTGCGAAAAGGCCAAAAAGATACTCTCCTCTGCCACCCAAACCGAGATTGA 645 43.57 MGRKFCDRTVQSDVKLWTFEIRAGPNNKPMIVVRYKCEERLIFAEQIAAMILTKMREISETFVGSTVKDAVITVPAYFNNAQRQATKDAGIIAGFNVKRIINEPTASAIAYGFDKKKAGQMIGQKIILIFDFGCGTLDVSLLTVQDGVFGVISTEGNTHLGGEDFDYILAEFFAKEFESKHKEDISRNPRALARVEKRLRKGQKDTLLCHPNRD 214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8727534 8728178 - Conep11aG0116700.1 Cone11ag1129 448381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1129 214 Gene3D Actin; Chain A, domain 4 161 201 - -
Cone11ag1129 214 FunFam heat shock 70 kDa protein-like 1 50 - -
Cone11ag1129 214 Gene3D - 51 115 - -
Cone11ag1129 214 PRINTS 70kDa heat shock protein signature 135 145 - -
Cone11ag1129 214 PRINTS 70kDa heat shock protein signature 70 90 - -
Cone11ag1129 214 SUPERFAMILY Actin-like ATPase domain 1 115 IPR043129 -
Cone11ag1129 214 PANTHER HEAT SHOCK PROTEIN 70KDA 1 200 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Cone11ag1129 214 Gene3D - 116 160 - -
Cone11ag1129 214 Pfam Hsp70 protein 1 201 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Cone11ag1129 214 SUPERFAMILY Actin-like ATPase domain 125 201 IPR043129 -
Cone11ag1129 214 FunFam Endoplasmic reticulum chaperone BiP 23 121 - -
Cone11ag1129 214 Gene3D - 1 50 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1129 Cone-Chr11:8727534 Cone3ag0331 Cone-Chr3:1685177 8.53E-79 dispersed
Cone11ag1129 Cone-Chr11:8727534 Cone10ag0303 Cone-Chr10:1439048 3.08E-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1129 K03283 - vvi:100259551 256.529