Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1143 ATGGCTACAGAGCCACAGCGCGTAACTCTCTTCTGTCTCTTCCTCTTCCTCTTGAGCCGCACAGCAAAATCCCAGCTCACCAACTCCGATTCTGAGCTCTTCTTCAACGGCTTCACTAACCGCACAGGAAACATCACCCTAAACGGTGCCGCAGAGATCGAACCTAGCGGCCTTCTCCGCCTCACGAACACGAGCTACCAGATCCTCGGCCACGCCTTCTACTCTTCTCCGATTCAATTCAAGAACTCAACCTCCCCTAAAGCTCTTTCCTTCTCCACCGCCTTCGCCTTCGCCATAGTCCCTCAGTACACTAACTCCGGCGGCCATGGCTTCGCCTTCACCATCTCTCCTTCCAAAACCCTCGCCGGAGCTCTCCCCAGCCAGTACCTCGGACTTCTCAACGCCAGTGACGCCGGAAACTTCTCCAACCATTTGTTCGCCGTAGAATTCGATACCGTTCAGGATTTCGAATTCAACGACATTGATAACAACCATGTCGGAATCGACATCAACAGTTTGGATTCAAACAAATCCGTGTCGGTTTCCAGCAAGAATTCTTCCTACCCGAATTTCAATCTGAAGAGCGGTGAAATTTTTCAAGCCTGGATCGATTACGATGCGGAAAATAATCTGATCGAGGTAAGGCTCAACAGGTCTTCGATAAAACCCATAAACCCAATTCTGTCTTGGAACGTGGATCTTTCGAATGTTCTAGAAGATTCCATGTACGTCGGATTTTCCAGCTCAACTGGTTCCCTTTCGAGCTCGCATTACATTCTGGGTTGGAGCTTCAGAATCAATAGTGGAGAAGCAAGGTCTTTCTATCTAGAAGCTTTACCTTCACTATCTCAGCCGAAGGAAAAGAGTCGGACGGCTCTGATAGTCGGTGTTTCGATTGGGACCGGTTTAGGGGCTTGTTTGGTAATAGGGATAGCTTATTACGTGTTTAGGAGAGTAAAAAACGCGGATGTGATCGAGCCGTGGGAAGTTGGAATTGGGCCGCATAGATTTCCTTACAAGGAGTTGAAGAAGGCAACAAGAGGGTTCGCAGAAAAAGAAGTGATCGGATTTGGCGGATTTGGTCGGGTTTATAAAGGGACATTGCCGAATTCGAAAACTGAAATCGCGGTCAAGCGGATTTATAGTGAATCCAAACAGGGGATTCAAGAATTCGTATCGGAAATTGCTAGCATCGGACGGCTTCGTCATAGGAATTTGGTTCAATTACTTGGTTGGTGTAGAAGAAAAGATGATCTCTTACTTGTGTATGACTTTATGCATAATGGGAGTTTAGATAAATGCCTTTTTAATCCATCGAATGGGTTGGTTTTGACTTGGGAACAACGGTTTAAGATCATTAAAGGTGTAGCTTCCGGGTTGTTATATTTGCACGAGGAGTGGGAGCAAACCGTGATTCATAGAGATATTAAAGCGGGAAATGTTTTGCTTGATATTGATCTAAATGCAAAGCTTGGTGATTTCGGATTGGCTAAGTTGCATGAGCACGGGTCAAACCCGAGCACAACCAGGGTTGTAGGCACATTAGGGTATTTGGCACCGGAGCTGACTCGGACCGGGAAACCCACGACGAACTCGGATGTGTTTGCGTTTGGGGCTTTGTTGCTTGAAGTGGTGTGTGGGAGAAGGCCCATGGATCCCAAGGCAATGCCTGAGGAGCTTATGTTGGTTGATTGGGTTTGGGAGAGGTGGAGGGACAGAGCAATCCTTGATGTTGTGGATCCAAAGTTGGGAGGTGAGTTTGATGAAGTGGAGGTTGTTGTGGTGTTGAAGTTGGGCCTTATGTGTTCTAACGATTTGCCTGAATCCCGGCCCAGTATGAGGCAGGTAGTGCGGTTCCTGGAGGGGGAGATTGCGCTACCAGATGTGGTGGAGAATCCGAATTTCCATGATATGAAAAAAGGGGGGAATGTCGTTGCATTTGAGGAGTGTATTGATTTGAAACCAACTTCTTATTTTGAAAAGGAAAGCATTTGGTCATCTGCCGGTGACGATAATGATGATGATGGCGAAGATGATAATGATGTTGAAATAGGTCGTTTAGTCTCACCCGTGATGGTTACCGGTAAAGCTCAATGA 2097 46.97 MATEPQRVTLFCLFLFLLSRTAKSQLTNSDSELFFNGFTNRTGNITLNGAAEIEPSGLLRLTNTSYQILGHAFYSSPIQFKNSTSPKALSFSTAFAFAIVPQYTNSGGHGFAFTISPSKTLAGALPSQYLGLLNASDAGNFSNHLFAVEFDTVQDFEFNDIDNNHVGIDINSLDSNKSVSVSSKNSSYPNFNLKSGEIFQAWIDYDAENNLIEVRLNRSSIKPINPILSWNVDLSNVLEDSMYVGFSSSTGSLSSSHYILGWSFRINSGEARSFYLEALPSLSQPKEKSRTALIVGVSIGTGLGACLVIGIAYYVFRRVKNADVIEPWEVGIGPHRFPYKELKKATRGFAEKEVIGFGGFGRVYKGTLPNSKTEIAVKRIYSESKQGIQEFVSEIASIGRLRHRNLVQLLGWCRRKDDLLLVYDFMHNGSLDKCLFNPSNGLVLTWEQRFKIIKGVASGLLYLHEEWEQTVIHRDIKAGNVLLDIDLNAKLGDFGLAKLHEHGSNPSTTRVVGTLGYLAPELTRTGKPTTNSDVFAFGALLLEVVCGRRPMDPKAMPEELMLVDWVWERWRDRAILDVVDPKLGGEFDEVEVVVVLKLGLMCSNDLPESRPSMRQVVRFLEGEIALPDVVENPNFHDMKKGGNVVAFEECIDLKPTSYFEKESIWSSAGDDNDDDGEDDNDVEIGRLVSPVMVTGKAQ 698
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8802768 8805274 - Conep11aG0118400.1 Cone11ag1143 448395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1143 698 FunFam Lectin-domain containing receptor kinase A4.3 334 425 - -
Cone11ag1143 698 SUPERFAMILY Protein kinase-like (PK-like) 331 638 IPR011009 -
Cone11ag1143 698 PANTHER - 38 627 IPR050528 GO:0005886(PANTHER)
Cone11ag1143 698 SMART serkin_6 349 620 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag1143 698 FunFam L-type lectin-domain containing receptor kinase S.4 29 272 - -
Cone11ag1143 698 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524(InterPro)
Cone11ag1143 698 Gene3D Transferase(Phosphotransferase) domain 1 426 638 - -
Cone11ag1143 698 CDD lectin_legume_LecRK_Arcelin_ConA 35 267 IPR001220 GO:0030246(InterPro)
Cone11ag1143 698 Pfam Legume lectin domain 33 272 IPR001220 GO:0030246(InterPro)
Cone11ag1143 698 MobiDBLite consensus disorder prediction 664 685 - -
Cone11ag1143 698 Gene3D - 31 269 - -
Cone11ag1143 698 CDD STKc_IRAK 355 622 - -
Cone11ag1143 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag1143 698 FunFam L-type lectin-domain containing receptor kinase S.4 426 633 - -
Cone11ag1143 698 Pfam Protein kinase domain 350 553 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag1143 698 ProSiteProfiles Protein kinase domain profile. 349 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag1143 698 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 268 IPR013320 -
Cone11ag1143 698 Gene3D Phosphorylase Kinase; domain 1 334 425 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1143 Cone-Chr11:8802768 Cone19ag1343 Cone-Chr19:8943281 1.67E-274 dispersed
Cone14ag0227 Cone-Chr14:1053584 Cone11ag1143 Cone-Chr11:8802768 2.89E-56 dispersed
Cone15ag0245 Cone-Chr15:1156053 Cone11ag1143 Cone-Chr11:8802768 2.13E-62 dispersed
Cone10ag0326 Cone-Chr10:1536026 Cone11ag1143 Cone-Chr11:8802768 2.49E-227 wgd
Cone11ag1143 Cone-Chr11:8802768 Cone18ag0439 Cone-Chr18:2140102 0 wgd
Cone11ag1143 Cone-Chr11:8802768 Cone19ag1342 Cone-Chr19:8941194 3.69E-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81907 PF00646 F-box 6.10E-05 CL0271 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1143 - - - 0.0