Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1145 ATGAGATCTATAGACCCCCTTTCCTCCTCCTCCTCATCTGATCCCTCCCTTCACCTCAAAATCACAGATCAAGTAGAAGACAACCGCACAAGTTCGCTCTCGGACCGGCTTGGTCCCGGAAGAGAACAAATTTTCTTTGAACACAAAGAAAGTAATGGACATAACAACATTAGTATGAATGTTGAAGATCTCAACTCTGTCAGCCAATTAGAATCATCCGTCTGTGAACCGCCCAGTAATTACATGATTGCTCGCCAGCATACAAGAGGCCGTCCTCCGGGGTCTAAAAACAAGCCCAAACCACGTCCGATTGTTCTCACTGAAGAGGTCGGTGGGCCTGACCCTCTTCGGAGCTTCATCTTCGAGATCGATAACGGCAACGACATTGTGGCGTGCATAGATACCTTTGCAAAGCGAAGACATAGAGGAGTCACGATTCTAAGTGGAAGTGGAACTGTTGCTAACGTTACTCTTAAGCAGCAATTATTAGGTGATCAAGAAAATCAAGTTTTGAATCTTGAAGGAAGGTTTGAGATATTATCTCTTTCTGGGGTATTTTTGCCCGCCCCTTTGCCAACCCGAGCTTCGAGGCTGACCGTGTATCTAGCCGGAGGGGAAGGGGGCCAAGTTGTTGGAGGTTGTGTTTCAGGCCCACTTGTGGCGGATGGACCAGTTGTTGTAGTTGCCGCGACGTTTATGAATGTGATGTATGAGAATTTGCCGATTAGAGACGGTTGGGAAAGCGTCTATAATGATAATTTGTCTAATAAATTGATTGAAAATGGTGACAAGATGCAGCATGATGATTTGTATCAGGGCCTTCCTCGACCGTGA 834 46.16 MRSIDPLSSSSSSDPSLHLKITDQVEDNRTSSLSDRLGPGREQIFFEHKESNGHNNISMNVEDLNSVSQLESSVCEPPSNYMIARQHTRGRPPGSKNKPKPRPIVLTEEVGGPDPLRSFIFEIDNGNDIVACIDTFAKRRHRGVTILSGSGTVANVTLKQQLLGDQENQVLNLEGRFEILSLSGVFLPAPLPTRASRLTVYLAGGEGGQVVGGCVSGPLVADGPVVVVAATFMNVMYENLPIRDGWESVYNDNLSNKLIENGDKMQHDDLYQGLPRP 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8815268 8816101 - Conep11aG0118600.1 Cone11ag1145 448397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1145 277 Gene3D - 116 245 - -
Cone11ag1145 277 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 233 IPR005175 -
Cone11ag1145 277 SUPERFAMILY AF0104/ALDC/Ptd012-like 114 241 - -
Cone11ag1145 277 MobiDBLite consensus disorder prediction 84 110 - -
Cone11ag1145 277 MobiDBLite consensus disorder prediction 1 39 - -
Cone11ag1145 277 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 82 244 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cone11ag1145 277 CDD DUF296 117 190 IPR005175 -
Cone11ag1145 277 ProSiteProfiles PPC domain profile profile. 113 252 IPR005175 -
Cone11ag1145 277 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1145 Cone-Chr11:8815268 Cone3ag0681 Cone-Chr3:3469813 5.49E-53 dispersed
Cone1ag1260 Cone-Chr1:56147160 Cone11ag1145 Cone-Chr11:8815268 4.00E-50 wgd
Cone11ag1145 Cone-Chr11:8815268 Cone18ag0437 Cone-Chr18:2129411 2.99E-146 wgd
Cone11ag1145 Cone-Chr11:8815268 Cone5ag0246 Cone-Chr5:1041605 3.95E-52 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1145 - - - 0.0