Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone11ag1168 | ATGGCAAGGATCAGAGATAGAACTGAAGATTTCAAGGATGCTGTGAGGCATACTGCTCAATCTTTAGGATATAATGAGTCCAAGTTAGCATCAATTATGGCCTCTTTCATAATTCAGAAACCCCGTCAGAGGTCTTCTTTTATCAAAGCTGCACTAAAGACGCTAGAAAGTATTGGAGCTCTCGAACAGTTTTTGTTGAAACATCGGAAAGACTATGTAGATATGCGCCGTACCACAGAGCAGGAGAGAGACAGCATTGAAACTGAAGTGAGTGCTTTCATCAAAGCATGCCAAGAACAAATTGATATTCTTAAAAACAGTATAAATGATGAAGAAGCGCACTCAAAGGGCTGGCTCGGTATATCAGCTAATGATGCTAATGCTGATACCATAGCACACAAACATGGGGTGGTCCTGATTTTGAGTGAGAAGCTCCACTCGGTTACATCCCAATTTGATCAGCTAAGAGCGATTCGCTTCCAAGATGTCATTAACAAAGCAACGCCAAGAAGAAAACCTACACGGGTTATAAGTGCAAATTCCGAATATACCTCTAGATCGAAAAATTCAAATTTGAGAGAGCCTGAGGATTTTCAACCCGAGCCTCTAAGAGTCCAACAACAACTGTTGGACGATGAAACGCGTGCACTTCAGGCAGAATTGAGTAGTCTTCTTGATGTAGCTCAAGAAACCGAGAGGAAAATGGTGGAAATGTCTGCTTTAAATCACCTCATGTCAACCCATGTTTTGCAGCAATCTCAACAAATAGAATTTCTTTATGAACAGGCAGTAGAAGCCACGAAGAACGTCGAGCTTGGTAACAAGGAACTGTCGCAAGCCATTAACCGGAATAGCAGCAGCAGAACATTTCTTTTGCTTTTTCTGTTTGTCCTTACCTTTTCAGTCATCTTTCTTGATTGGTATAGTTGA | 930 | 41.29 | MARIRDRTEDFKDAVRHTAQSLGYNESKLASIMASFIIQKPRQRSSFIKAALKTLESIGALEQFLLKHRKDYVDMRRTTEQERDSIETEVSAFIKACQEQIDILKNSINDEEAHSKGWLGISANDANADTIAHKHGVVLILSEKLHSVTSQFDQLRAIRFQDVINKATPRRKPTRVISANSEYTSRSKNSNLREPEDFQPEPLRVQQQLLDDETRALQAELSSLLDVAQETERKMVEMSALNHLMSTHVLQQSQQIEFLYEQAVEATKNVELGNKELSQAINRNSSSRTFLLLFLFVLTFSVIFLDWYS | 309 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 8925283 | 8927654 | + | Conep11aG0120900.1 | Cone11ag1168 | 448420 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone11ag1168 | 309 | Coils | Coil | 94 | 114 | - | - | |
| Cone11ag1168 | 309 | MobiDBLite | consensus disorder prediction | 170 | 200 | - | - | |
| Cone11ag1168 | 309 | MobiDBLite | consensus disorder prediction | 174 | 188 | - | - | |
| Cone11ag1168 | 309 | Gene3D | - | 211 | 306 | - | - | |
| Cone11ag1168 | 309 | Coils | Coil | 214 | 234 | - | - | |
| Cone11ag1168 | 309 | FunFam | Syntaxin-81 like | 212 | 306 | - | - | |
| Cone11ag1168 | 309 | PANTHER | SYNTAXIN-18 | 1 | 309 | - | GO:0005783(PANTHER)|GO:0006890(PANTHER)|GO:0031201(PANTHER) | |
| Cone11ag1168 | 309 | Pfam | SNARE-complex protein Syntaxin-18 N-terminus | 5 | 86 | IPR019529 | - | |
| Cone11ag1168 | 309 | SUPERFAMILY | t-snare proteins | 56 | 273 | IPR010989 | GO:0016020(InterPro)|GO:0016192(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone11ag1168 | Cone-Chr11:8925283 | Cone18ag0421 | Cone-Chr18:2044321 | 4.80E-200 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone11ag1168 | K08492 | - | mdm:103423429 | 469.159 |