Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone11ag1238 | ATGAAAGAGATCAATGAAGAACCAACGAGCGAACCAAGAGCTGGGAGGGCAACAGTGCAACCGCTGGTCGGTCCTGGTGCAGCTGCCGCAACTTTCGCCCAGTGGCTCCAAGCCCTCTCCGCCTCTGCTCCACACGAACTGAAAAACGAAAAATCGTCCCTTTCCCCCTCCGCAAAACTCTCGCGCCCGTTAATCGTTCGGGAAGGGAAGATCATAATGGTTGATCAAGTTCAACATCCCACTGTCTTTCAGAAGATGGCTGGAAGCCTCCACTGCCAGTCCACTCTTTCAACTGATTTTCAGGGTGACTTTGGCTTCCAGAGACCTGCTTTCCATCAAAGACGTGCCACCTTCGGGAACTACTCCAATGCTGCATTGGTTCCATCATGCAGGGCCACTGTTGATCTATCTAGCGTTACCTCAACTGCTTCCCCAGTTTTTGTTGCAGCCCCTGCAGAGAAAGGGCACTTTCTGATTGATTTCCTTATGGGTGGTGTCTCTGCTGCTGTGTCCAAGACAGCTGCTGCCCCAATTGAACGCGTCAAGCTTTTGATTCAAAATCAGGATGAGATGATTAAAACTGGCAGGCTTGCTGAACCCTACAAGGGCATTGGTGATTGTTTCAGCCGAACTATCAAGGAAGAGGGTTTTGGTTCATTGTGGAGGGGTAACACTGCTAATGTCATCCGTTACTTCCCAACTCAAGCCTTGAACTTTGCTTTCAAGGACTACTTCAAGAGGCTTTTTAACTTCAAGAAAGACAAGGATGGTTACTGGAAATGGTTTGCTGGAAACCTTGCATCTGGTGGTGCTGCTGGTGCTTCATCACTCCTCTTTGTCTATTCTCTTGACTATGCTCGTACCCGTTTGGCCAACGATGCTAAGGCTGCAAAGAAGGGAGGAGAGAGGCAATTCAATGGTCTGGTAGATGTATACAAGAAGACATTGGCATCTGATGGCATTGCTGGGCTTTACCGTGGGTTCAACATTTCATGTGTTGGTATCATTGTCTACCGTGGTCTTTACTTTGGAATGTACGACTCTCTGAAGCCAGTCCTCTTGACCGGATCGTTGCAGGATAGCTTCTTCGCTAGTTTTGCACTAGGTTGGCTCATCACCAACGGTGCAGGGCTTGCTTCCTACCCCATTGACACAGTCCGTAGAAGAATGATGATGACTTCTGGAGAAGCAGTCAAGTACAAGAGCTCTTTCGATGCATTCAACCAGATTCTGAAGAATGAGGGAGCCAAGTCTCTCTTCAAGGGTGCTGGTGCTAACATCCTCCGTGCTGTTGCTGGTGCTGGTGTGCTCGCTGGTTACGATAAGTTGCAGGTCATTGTGTTCGGAAAGAAGTACGGATCTGGTGGTGCTTAA | 1374 | 48.84 | MKEINEEPTSEPRAGRATVQPLVGPGAAAATFAQWLQALSASAPHELKNEKSSLSPSAKLSRPLIVREGKIIMVDQVQHPTVFQKMAGSLHCQSTLSTDFQGDFGFQRPAFHQRRATFGNYSNAALVPSCRATVDLSSVTSTASPVFVAAPAEKGHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKTGRLAEPYKGIGDCFSRTIKEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTLASDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFNQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA | 457 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 9278307 | 9282569 | - | Conep11aG0128200.1 | Cone11ag1238 | 448490 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone11ag1238 | 457 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Cone11ag1238 | 457 | PRINTS | Adenine nucleotide translocator signature | 234 | 246 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Cone11ag1238 | 457 | PRINTS | Adenine nucleotide translocator signature | 260 | 273 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Cone11ag1238 | 457 | PRINTS | Adenine nucleotide translocator signature | 157 | 169 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Cone11ag1238 | 457 | PRINTS | Adenine nucleotide translocator signature | 201 | 222 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Cone11ag1238 | 457 | PRINTS | Adenine nucleotide translocator signature | 365 | 381 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Cone11ag1238 | 457 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 260 | 352 | IPR018108 | - | |
| Cone11ag1238 | 457 | SUPERFAMILY | Mitochondrial carrier | 156 | 442 | IPR023395 | - | |
| Cone11ag1238 | 457 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 155 | 248 | IPR018108 | - | |
| Cone11ag1238 | 457 | FunFam | ADP,ATP carrier protein, mitochondrial | 158 | 453 | - | - | |
| Cone11ag1238 | 457 | Gene3D | Mitochondrial carrier domain | 158 | 453 | IPR023395 | - | |
| Cone11ag1238 | 457 | PRINTS | Mitochondrial carrier protein signature | 223 | 243 | IPR002067 | GO:0055085(InterPro) | |
| Cone11ag1238 | 457 | PRINTS | Mitochondrial carrier protein signature | 173 | 187 | IPR002067 | GO:0055085(InterPro) | |
| Cone11ag1238 | 457 | PRINTS | Mitochondrial carrier protein signature | 160 | 173 | IPR002067 | GO:0055085(InterPro) | |
| Cone11ag1238 | 457 | PRINTS | Mitochondrial carrier protein signature | 325 | 343 | IPR002067 | GO:0055085(InterPro) | |
| Cone11ag1238 | 457 | PRINTS | Mitochondrial carrier protein signature | 369 | 391 | IPR002067 | GO:0055085(InterPro) | |
| Cone11ag1238 | 457 | PRINTS | Mitochondrial carrier protein signature | 275 | 293 | IPR002067 | GO:0055085(InterPro) | |
| Cone11ag1238 | 457 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 360 | 446 | IPR018108 | - | |
| Cone11ag1238 | 457 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 153 | 454 | IPR002113 | GO:0005471(PANTHER)|GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Cone11ag1238 | 457 | Pfam | Mitochondrial carrier protein | 260 | 354 | IPR018108 | - | |
| Cone11ag1238 | 457 | Pfam | Mitochondrial carrier protein | 156 | 252 | IPR018108 | - | |
| Cone11ag1238 | 457 | Pfam | Mitochondrial carrier protein | 360 | 448 | IPR018108 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone10ag1356 | Cone-Chr10:10575099 | Cone11ag1238 | Cone-Chr11:9278307 | 1.82E-207 | dispersed | |
| Cone11ag1238 | Cone-Chr11:9278307 | Cone8ag1517 | Cone-Chr8:11444879 | 2.68E-208 | dispersed | |
| Cone11ag1238 | Cone-Chr11:9278307 | Cone18ag0355 | Cone-Chr18:1720121 | 2.36E-273 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone11ag1238 | K05863 | - | csv:101203733 | 656.366 |