Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone11ag1246 | ATGGAGGAAGAGAAAGGTGTTCTCGCCCAGAAACTGGTCGACGTTGTGAACGAGATAGCTTCGATCTCGGATTACAGGTGTACGGTCAAGAAGCAGTATTGTAATCTGGTTAGGAGATTGAAGCTCTTAATTCCGATGTTCGAGGAGATTAGGGATTGCAAAGAGATTGTACCTGAGGAGACGGTGCATGCTCTGATCTCGTTGAAGAATACTCTAGAGTCAGCTAAGGAGTCGCTTAGATTTGGGAGCGAGGGGAGCAAGATATACTTGGTCCTAGAGAGGGAAAACATAATGAAAAAATTCCAAGAAGTAACAGCACAATTAGAACAAGCTTTGAGTGGGATTTCATATGACAAACTTGACATATCTGATGAAGTTAAGGAACAGGTCGAGCTTGTTCTTGCCCAGTTCAGACGAGCCAAAGGCAGGGCTGATGTGCCTGATGTTGAGCTATATGAAGATCTCTTGTCCCTTTACAATAGGAGCAATGATTCTTCTACAGATCCAGATGTCCTAAGGAGACTGGCTGGGAAGTTACAATTAGTGGGAATATCTGACCTCACCCAAGAGTCAATAGCTTTGCATGAGATGGTTGCTGCGAGTGGTGGTGATCCAGGAGAGAGCATTGAGAAGATGTCAATGCTACTAAAGCAAATTAAGGATTTTGTTCAAACAGAAAACCCTGAAATGGATACTCCTGAAAGATCAACGAGTCTTCCTTCGGGTTTCTCTGGTCAAATATACACCGACATGACTCAAAAGGCCACAGTCATACCAGATGATTTTCGCTGTCCTATATCCTTAGAGTTGATGAAGGATCCTGTAATAGTTTCAACTGGGCAGACCTATGAACGTTCCTGCATTGAAAAGTGGCTTGAGGCAGGGCATGGGACATGTCCTAAGACCCAGCAAACCCTCTCTAGCACCACTCTTACACCAAATTACGTCTTGCGTAGTCTCATAGCCCAATGGTGCGAGGCTAACGGCATCGAACCTCCAAAACGACCCAGCAGTTCTCGACCCACTAAAACCTTATCTTCATGCTCGCCTGCCGAACGAACAAAGATCGAAATTCTCCTCCGCAAGCTAAGCTCATCCAATCAAGAAGACCATCGTTCTGCTGCCTGTGAAATTCGCCTTCTTGCCAAACGCAATGCAGACAACAGGGTTGCCATAGCTGAGGCCGGAGCAATCCCTCTTCTTATAGGCCTCCTTTCAACCCCAGATTCCCGTACTCAAGAGCATGCAGTGACAGCACTTCTTAACCTTTCCATATGCGAGGATAACAAGGGAAGCATCATTTCCTCCGGGGCCGTTCCGGGTATAGTAAATGTGCTTAAAAAGGGAAGCATGGAAGCTCGGGAAAATGCTGCTGCTACCCTTTTTAGCCTCTCAGTTATAGATGAAAATAAAGTTACTATTGGTGCGTCAGGTGCCATCCCTCCACTTGTAACGCTTTTGAGTGAAGGTACTCAAAGGGGAAAGAAAGATGCAGCTACGGCTCTTTTCAATTTGTGCATTTACCAAGGGAATAAGGGAAAGGCCGTGAGGTCTGGTGTTGTTCCCACACTAATGCAGCTCTTGACTGAGCCGGGTGGAGGGATGGTTGATGAGGCCCTAGCCATCTTAGCCATATTGTCTAGCCATCCGGAAGGGAAGGCTGCCATTGGAGCTGCTGAAGCAGTGCCTGTCTTGGTTGAGGTGATTGGGATTGGATCCCCAAGGAATAGAGAGAATGCAGCTGCTGTTATGGTGCACCTTTGTGCGGGGGATCAACAACATTTAGTGGAGGCCCAGGAGTTGGGAGTGGTGGGTCCGTTAATAGATTTGGCACAGAATGGCACGGATAGAGGGAAGAGAAAGGCTGCACAATTGCTGGAGCGTTTGAACAGGTTTCTTGAGCAGCAAAAACAGGCTCAGGCTCAGGTAGAAGCGGAGGCTCAATCTCAAACCCAGATACCACCCTCCTCAACAGATGCTGCTGAAAGCTGA | 1992 | 47.19 | MEEEKGVLAQKLVDVVNEIASISDYRCTVKKQYCNLVRRLKLLIPMFEEIRDCKEIVPEETVHALISLKNTLESAKESLRFGSEGSKIYLVLERENIMKKFQEVTAQLEQALSGISYDKLDISDEVKEQVELVLAQFRRAKGRADVPDVELYEDLLSLYNRSNDSSTDPDVLRRLAGKLQLVGISDLTQESIALHEMVAASGGDPGESIEKMSMLLKQIKDFVQTENPEMDTPERSTSLPSGFSGQIYTDMTQKATVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQQTLSSTTLTPNYVLRSLIAQWCEANGIEPPKRPSSSRPTKTLSSCSPAERTKIEILLRKLSSSNQEDHRSAACEIRLLAKRNADNRVAIAEAGAIPLLIGLLSTPDSRTQEHAVTALLNLSICEDNKGSIISSGAVPGIVNVLKKGSMEARENAAATLFSLSVIDENKVTIGASGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRSGVVPTLMQLLTEPGGGMVDEALAILAILSSHPEGKAAIGAAEAVPVLVEVIGIGSPRNRENAAAVMVHLCAGDQQHLVEAQELGVVGPLIDLAQNGTDRGKRKAAQLLERLNRFLEQQKQAQAQVEAEAQSQTQIPPSSTDAAES | 663 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9316383 | 9320129 | + | Conep11aG0129000.1 | Cone11ag1246 | 448498 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone11ag1246 | 663 | Gene3D | - | 8 | 118 | IPR036537 | GO:0007166(InterPro) | |
Cone11ag1246 | 663 | PANTHER | U BOX DOMAIN-CONTAINING | 28 | 631 | - | - | |
Cone11ag1246 | 663 | Gene3D | - | 342 | 492 | IPR011989 | - | |
Cone11ag1246 | 663 | FunFam | RING-type E3 ubiquitin transferase | 5 | 118 | - | - | |
Cone11ag1246 | 663 | SUPERFAMILY | ARM repeat | 356 | 632 | IPR016024 | - | |
Cone11ag1246 | 663 | Pfam | Mixed lineage kinase domain-like N-terminal domain | 28 | 116 | IPR054000 | - | |
Cone11ag1246 | 663 | SUPERFAMILY | RING/U-box | 248 | 334 | - | - | |
Cone11ag1246 | 663 | ProSiteProfiles | U-box domain profile. | 257 | 331 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Cone11ag1246 | 663 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 396 | 438 | IPR000225 | GO:0005515(InterPro) | |
Cone11ag1246 | 663 | Coils | Coil | 619 | 646 | - | - | |
Cone11ag1246 | 663 | Pfam | U-box domain | 258 | 328 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Cone11ag1246 | 663 | FunFam | RING-type E3 ubiquitin transferase | 341 | 492 | - | - | |
Cone11ag1246 | 663 | Pfam | Armadillo/beta-catenin-like repeat | 385 | 424 | IPR000225 | GO:0005515(InterPro) | |
Cone11ag1246 | 663 | Pfam | Armadillo/beta-catenin-like repeat | 468 | 506 | IPR000225 | GO:0005515(InterPro) | |
Cone11ag1246 | 663 | SMART | arm_5 | 508 | 548 | IPR000225 | GO:0005515(InterPro) | |
Cone11ag1246 | 663 | SMART | arm_5 | 549 | 589 | IPR000225 | GO:0005515(InterPro) | |
Cone11ag1246 | 663 | SMART | arm_5 | 385 | 425 | IPR000225 | GO:0005515(InterPro) | |
Cone11ag1246 | 663 | SMART | arm_5 | 591 | 631 | IPR000225 | GO:0005515(InterPro) | |
Cone11ag1246 | 663 | SMART | arm_5 | 467 | 507 | IPR000225 | GO:0005515(InterPro) | |
Cone11ag1246 | 663 | SMART | arm_5 | 426 | 466 | IPR000225 | GO:0005515(InterPro) | |
Cone11ag1246 | 663 | Gene3D | - | 496 | 649 | IPR011989 | - | |
Cone11ag1246 | 663 | CDD | MLKL_NTD | 10 | 138 | - | - | |
Cone11ag1246 | 663 | SMART | Ubox_2 | 261 | 324 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Cone11ag1246 | 663 | FunFam | RING-type E3 ubiquitin transferase | 532 | 650 | - | - | |
Cone11ag1246 | 663 | CDD | RING-Ubox_PUB | 259 | 311 | IPR045210 | - | |
Cone11ag1246 | 663 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 255 | 331 | IPR013083 | - | |
Cone11ag1246 | 663 | MobiDBLite | consensus disorder prediction | 637 | 663 | - | - | |
Cone11ag1246 | 663 | FunFam | RING-type E3 ubiquitin transferase | 258 | 331 | - | - | |
Cone11ag1246 | 663 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 519 | 561 | IPR000225 | GO:0005515(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag1246 | Cone-Chr11:9316383 | Cone5ag0357 | Cone-Chr5:1515471 | 1.48E-155 | dispersed | |
Cone1ag1368 | Cone-Chr1:56616173 | Cone11ag1246 | Cone-Chr11:9316383 | 1.12E-15 | dispersed | |
Cone2ag0881 | Cone-Chr2:34729517 | Cone11ag1246 | Cone-Chr11:9316383 | 1.53E-09 | dispersed | |
Cone8ag1322 | Cone-Chr8:10723664 | Cone11ag1246 | Cone-Chr11:9316383 | 2.59E-14 | dispersed | |
Cone9ag1248 | Cone-Chr9:9156608 | Cone11ag1246 | Cone-Chr11:9316383 | 1.16E-15 | dispersed | |
Cone11ag1246 | Cone-Chr11:9316383 | Cone18ag0344 | Cone-Chr18:1688095 | 2.07E-307 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone11ag1246 | K27628 | - | cit:102612007 | 1028.85 |