Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1248 ATGGCGAAAGTCCTGATTTCATCTCCACCGTTCGTCGGCGCTCCACTTTCATCATCCCTCTCTCGCCATGGCGGCCTCAAGAGCCTACCTCAACGTAGACTCGTCGCAACCAGAGTCAAGTTCAGTCTCCATGAGATTCCACCTGTCCATTCTTTCGATTCCGCTGCCTTTGATTTCAACGCGATTGTAAGCAGAGCTGAAGGCTTGATTTATACGCTCGCCGATGCTGCAGTTGCGGTTGATCCGGCGGCTTCAGGCGACGCAGCTACTTCCACAGGTGATGCTGTCGTGCAGAAGAATGGTGGCTGGTTCGGATTTATCTCCGACGGAATGGAATTCGTTCTCAAGGTGTTGAAAGATGGACTTACAGCCGTGCACGTGCCTTATGCATATGGATTTGCAATTATACTGCTCACTGTTATTGTTAAAGTTGCCACTTTGCCTCTTACCAAGCAGCAGGTTGAATCCACGTTGGCAATGCAAAACCTCCAACCAAAGATTAAAGCCATCCAACAAAGATATGCTGGGAATCAAGAAAGAATACAACTTGAGACATCACGGCTTTATAGGCAGGCTGGCGTGAATCCGCTAGCAGGTTGTTTACCTACTTTGGCCACTATACCAGTCTGGATAGGACTATACCAAGCTCTTTCAAACGTGGCAAATGAGGGATTGTTGACAGAAGGTTTCTTTTGGATACCATCCCTAGGTGGCCCAACTACAATTGCTGCTCGACAAAGTGGAGCAGGAATTTCATGGCTAATACCATTTGTGGATGGCCATCCACCATTGGGCTGGCAAGATACTGCAGCATACCTTGTTCTACCTGTCCTCCTTGTTGCTTCTCAGTATGTATCGATGGAAATTATGAAGCCTCCCCAGACTGATGATCCAGCTCAAAAGAATACACTTCTTGTTTTCAAGTTTCTTCCACTCATGATTGGTTACTTCTCCTTATCTGTTCCGTCTGGATTATCCATTTATTGGTTCACAAATAATGTTCTTAGCACAGCACAGCAAGTTTGGTTACGGAAAATGGGAGGTGCGAAGCCAGTTGTGAACGAGGATGCTAGTGGAATCATAACAGCAGGACGGGCAAAAAGAATAGCTTTAGAGTCAGGGCGGGATGGTGATAAGTTTAGGCAGTTAAAAGAACAGGAGAACAGTAAAAAATCAAGAAAGCCCGTACAGGCTGAAGTGATTGAGACTCTGGCTCTTGAATCTGACTCTGAAGATGGCTCAGAAGAAGATATTAAGGAGAAGGGTGTGGAAGTGGAAGAAGCCTACGCTTCTAATGCTGGCAAAAGCATCCCAGATTATAACAGACCGAAAAGAAGCAAGCGTTCAAAGCGAAAGAGAGCTGTATGA 1368 46.2 MAKVLISSPPFVGAPLSSSLSRHGGLKSLPQRRLVATRVKFSLHEIPPVHSFDSAAFDFNAIVSRAEGLIYTLADAAVAVDPAASGDAATSTGDAVVQKNGGWFGFISDGMEFVLKVLKDGLTAVHVPYAYGFAIILLTVIVKVATLPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLIPFVDGHPPLGWQDTAAYLVLPVLLVASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKMGGAKPVVNEDASGIITAGRAKRIALESGRDGDKFRQLKEQENSKKSRKPVQAEVIETLALESDSEDGSEEDIKEKGVEVEEAYASNAGKSIPDYNRPKRSKRSKRKRAV 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9323512 9327788 + Conep11aG0129200.1 Cone11ag1248 448500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1248 455 Pfam 60Kd inner membrane protein 131 345 IPR028055 -
Cone11ag1248 455 NCBIfam membrane protein insertase YidC 131 344 IPR028055 -
Cone11ag1248 455 PANTHER OXA1 31 392 IPR001708 GO:0009535(PANTHER)|GO:0010027(PANTHER)|GO:0016020(InterPro)|GO:0032977(PANTHER)|GO:0032977(InterPro)|GO:0051205(PANTHER)|GO:0072598(PANTHER)
Cone11ag1248 455 MobiDBLite consensus disorder prediction 404 455 - -
Cone11ag1248 455 CDD 5TM_YidC_Alb3 132 345 IPR047196 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1248 Cone-Chr11:9323512 Cone13ag1100 Cone-Chr13:8887270 4.73E-143 dispersed
Cone11ag1248 Cone-Chr11:9323512 Cone18ag0342 Cone-Chr18:1681920 3.57E-299 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1248 K03217 - vvi:100260431 695.271