Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1268 ATGGGAAAAGGAGGTGAAGATTATGGTAAAAAAGAAACCGTTTATACCGACTCTTCAGAACGAGAAACCTTCCCTGCATGGGGGAAGGACGTTCAAGAATGCGAGGAGAAGTACCAAGTGAGTCGTCACGTAGGGTTATCATCCAAAGAAGTTGAGAAGCGGAGAAAAATATATGGTTTGAATGAACTGGAGAAGCATGAAGGTACTTCAATTTTTAAACTGATTCTGGAGCAGTTCGATGACACATTGGTTAGGATTCTATTAGCCGCGGCAGTTGTATCTTTTGTTCTTGCATGGTACGATGGTGATGAAGGGGGTGAGCTGACAATTACAGCTTTTGTAGAGCCACTTGTGATTTTTCTGATCTTAATTGTAAATGCCATTGTGGGGATCTGGCAGGAGAGCAACGCTGAGAAAGCACTAGAAGCTTTGAAAGAAATTCAGTCTGAGCAGGCAACTGTGATTCGAGATGGTAAGCGGGTTCCAAATTTCCCTGCAAAGGAGCTTGTACCTGGTGATATTGTTGAATTGAAGGTCGGTGATAAAGTTCCTGCTGACATGAGGGTCTTGAGTTTAATCAGTTCAACTTTCCGAACTGAGCAGGGGTCATTGACTGGTGAGAGTGAAGCTGTGAGCAAGACTACTAAGGCTGTTCCAGAAAATGCAGATATACAGGGCAAGAAATGTATGGTTTTTGCAGGGACAACTGTGGTGAATGGGAATTGCATTTGCTTGGTTACCCATATAGGGATGGATACCGAGTTAGGAAAGGTGCACTCCCAGATTCAAGAAGCATCAGAAAATGAGGACGATACCCCATTGAAGAAGAAGCTGAATGAGTTTGGAGAGCTCTTAACTGTGATAATCGGATTAGTCTGTGCATTGGTCTGGCTTATTAACTTGAAGTACTTTCTTACATGGGAAGTTGTTGATGGGTGGCCAAGAAATTTTAAGTTCTCTTTTGAGAAGTGTACATATTACTTTGAGATTGCTGTGGCATTGGCTGTTGCTGCTATTCCAGAAGGTCTTCCAGCAGTTATTACAACATGCTTGGCTCTTGGAACACGGAAGATGGCTCAAAAGAACGCACTTGTCCGGAAGCTTCCCAGCGTTGAAACACTTGGTTGTACGACTGTGATTTGTTCTGATAAAACAGGTACTCTGACAACCAATCAGATGGCTGTGTCAAAGCTTGTCGCGATGGGTTCTAGGGCTGGTTCTCTCCGAGCTTTTGATGTTGAAGGGACCTCGTATGATCCATGTGATGGAAAAATACATGGCTGGCCAGCAAGCAAAATGGATGCTAATCTTCAGATGGTTGCAAAAATTGCTGCTGTTTGTAATGATGCAGGTGTTGAGCAGTCTGGGAATCATTTTGTTGCTAGTGGAATGCCCACTGAGGCAGCTTTGAAAGTTCTGGTGGAGAAGATGGGACATCCTCAAGGAGTTTATTCTGATTCAAGGTCCACTGATGGGAATGTCCTGCGATGTTGTCAACTATGGAATGAAACTGAGCGTCGCATTGCAACCCTTGAGTTTGATCGAGATCGTAAATCTATGGGAGTTATTGCAAATTCTAGCTCTGGGAAAAAGTTGTTGCTGGTCAAGGGTGCGGTTGAGAATTTGTTGGAACGAAGTTCATCGATTCTGCTGCTTGATGGATCCATTGTGAAGCTGGATGATAATTCCAGAAATTTTGTCTTAGAAAGCCTTCATGAAATGTCGACAGGTGCATTACGATGTTTGGGTTTTGCATACAAGGATGAGCTTCCAGAGTTTGAAACATATAATGGTGATGAAGATCATCCAGCTCACGAGCTTTTGCTTAACCCATCCAATTACTCATCCATTGAAAGTAACATGATTTTTGTTGGCTTGGCTGGTTTGAGGGATCCTCCTCGGAAAGAGGTCCGTCAAGCAATTGAAGACTGCAGAGCTGCTGGCATTCGAGTGATGGTCATCACTGGAGACAATAAGAATACTGCTGAAGCCATATGCCGCGAAATAGGCGTATTTGAATGTAATGAAAATATAGGTTCAAAAAGCTTAACAGGTAAAGAATTCATGTGCCTGGATACTTGTGATCAGAAAAATCATCTAAGACAAAGCGGAGGACTTCTATTCTCGAGGGCTGAACCTAGGCATAAACAAGAAATAGTGAGATTGCTTAAGGAAGATGGTGAAGTTGTTGCAATGACTGGAGATGGAGTCAATGATGCACCTGCTTTGAAATTGGCTGACATTGGGATTGCAATGGGCATTTCTGGGACAGAGGTTGCAAAGGAAGCCTCAGACATGGTCCTAGCAGATGATAACTTTAGCACGATAGTTGCAGCCGTTGGTGAAGGCAGATCTATCTACAACAATATGAAGGCTTTTATCAGGTACATGATCTCATCAAATATCGGTGAGGTTGCCTCTATATTTCTAACTGCAGCACTGGGTATTCCTGAAGGAATGATCCCAGTCCAACTTCTCTGGGTCAATCTTGTTACTGATGGGCCCCCAGCTACAGCATTAGGATTTAATCCCCCTGACAAAGATATAATGAAGAAGCAACCTAGAAGAAGCGATGACTCATTGATTACCCTTTGGATTTTGATACGCTATCTGGTGATTGGAATGTATGTTGGTATTGCAACAGTGGGTGCATTTGTGATCTGGTACACACAGTCTTCATTCTTGGGCATTGACTTGACCAAAGACGGACATACCCTTGTCTCATATTCTCAACTTGCTAACTGGGATCAGTGTCACACTTGGGATGGATTTACGGTCTCACCCTTTACAGCTGGATCTGATGTGTTTAACTTTGATGCGAATCCATGCGAGTACTTCAAGTCTGGAAAAATCAAGGCCTCAACTCTGTCTCTTTCCGTCTTGGTTGCAATTGAGATGTTCAATTCCCTAAATGCCCTTTCCGAGGATGGCAGTCTACTGACCATGCCCCCATGGGTCAACCCATTTCTTCTTTTAGCCATGGCTGTTTCTTTTGGCTTGCACTTCTTGATTCTCTATGTGCCATTCCTTGCCCAAGTGTTTGGTATAGTTCCTCTGAGTCTGAATGAATGGCTCTTGGTTCTGGCTGTTTCTTTACCGGTTATTCTCATCGATGAGGTTCTCAAGTTGATTGGAAGGTGTACCAGTGGATTAAGAGATTCTCGTCCAAGAAAATACGTGAAGGATGACAAAGAAGAGTGA 3201 43.33 MGKGGEDYGKKETVYTDSSERETFPAWGKDVQECEEKYQVSRHVGLSSKEVEKRRKIYGLNELEKHEGTSIFKLILEQFDDTLVRILLAAAVVSFVLAWYDGDEGGELTITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVIRDGKRVPNFPAKELVPGDIVELKVGDKVPADMRVLSLISSTFRTEQGSLTGESEAVSKTTKAVPENADIQGKKCMVFAGTTVVNGNCICLVTHIGMDTELGKVHSQIQEASENEDDTPLKKKLNEFGELLTVIIGLVCALVWLINLKYFLTWEVVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVSKLVAMGSRAGSLRAFDVEGTSYDPCDGKIHGWPASKMDANLQMVAKIAAVCNDAGVEQSGNHFVASGMPTEAALKVLVEKMGHPQGVYSDSRSTDGNVLRCCQLWNETERRIATLEFDRDRKSMGVIANSSSGKKLLLVKGAVENLLERSSSILLLDGSIVKLDDNSRNFVLESLHEMSTGALRCLGFAYKDELPEFETYNGDEDHPAHELLLNPSNYSSIESNMIFVGLAGLRDPPRKEVRQAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFECNENIGSKSLTGKEFMCLDTCDQKNHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGISGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKQPRRSDDSLITLWILIRYLVIGMYVGIATVGAFVIWYTQSSFLGIDLTKDGHTLVSYSQLANWDQCHTWDGFTVSPFTAGSDVFNFDANPCEYFKSGKIKASTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPFLLLAMAVSFGLHFLILYVPFLAQVFGIVPLSLNEWLLVLAVSLPVILIDEVLKLIGRCTSGLRDSRPRKYVKDDKEE 1066
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9421252 9427445 + Conep11aG0131200.1 Cone11ag1268 448520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1268 1066 Pfam haloacid dehalogenase-like hydrolase 625 747 - -
Cone11ag1268 1066 NCBIfam HAD-IC family P-type ATPase 118 308 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone11ag1268 1066 NCBIfam HAD-IC family P-type ATPase 320 402 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone11ag1268 1066 NCBIfam HAD-IC family P-type ATPase 707 817 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone11ag1268 1066 Pfam E1-E2 ATPase 147 361 - -
Cone11ag1268 1066 Gene3D - 378 778 IPR023214 -
Cone11ag1268 1066 SUPERFAMILY HAD-like 379 837 IPR036412 -
Cone11ag1268 1066 Gene3D - 45 263 - -
Cone11ag1268 1066 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 388 629 IPR023299 GO:0000166(InterPro)
Cone11ag1268 1066 PANTHER CALCIUM-TRANSPORTING ATPASE 29 1049 - GO:0005388(PANTHER)|GO:0006874(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0070588(PANTHER)
Cone11ag1268 1066 Pfam Cation transport ATPase (P-type) 445 549 - -
Cone11ag1268 1066 SMART Cation_ATPase_N_a_2 25 99 IPR004014 -
Cone11ag1268 1066 SFLD C1.7: P-type atpase like 362 785 - -
Cone11ag1268 1066 Gene3D - 391 632 IPR023299 GO:0000166(InterPro)
Cone11ag1268 1066 SUPERFAMILY Calcium ATPase, transduction domain A 149 260 IPR008250 -
Cone11ag1268 1066 FunFam Calcium-transporting ATPase, putative 126 263 - -
Cone11ag1268 1066 Gene3D - 77 1046 - -
Cone11ag1268 1066 FunFam Calcium-transporting P-type ATPase, putative 622 778 - -
Cone11ag1268 1066 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 391 632 - -
Cone11ag1268 1066 SFLD p-type atpase 362 785 IPR044492 -
Cone11ag1268 1066 PRINTS P-type cation-transporting ATPase superfamily signature 200 214 - -
Cone11ag1268 1066 PRINTS P-type cation-transporting ATPase superfamily signature 381 395 - -
Cone11ag1268 1066 PRINTS P-type cation-transporting ATPase superfamily signature 647 657 - -
Cone11ag1268 1066 PRINTS P-type cation-transporting ATPase superfamily signature 757 769 - -
Cone11ag1268 1066 PRINTS P-type cation-transporting ATPase superfamily signature 625 636 - -
Cone11ag1268 1066 PRINTS P-type cation-transporting ATPase superfamily signature 733 752 - -
Cone11ag1268 1066 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 243 401 - -
Cone11ag1268 1066 SUPERFAMILY Calcium ATPase, transmembrane domain M 26 1047 IPR023298 -
Cone11ag1268 1066 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 797 1051 - -
Cone11ag1268 1066 ProSitePatterns E1-E2 ATPases phosphorylation site. 383 389 IPR018303 -
Cone11ag1268 1066 MobiDBLite consensus disorder prediction 1 23 - -
Cone11ag1268 1066 Pfam Cation transporting ATPase, C-terminus 819 1044 IPR006068 -
Cone11ag1268 1066 Pfam Cation transporter/ATPase, N-terminus 27 94 IPR004014 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1268 Cone-Chr11:9421252 Cone14ag0443 Cone-Chr14:2069229 0 dispersed
Cone1ag0679 Cone-Chr1:6365823 Cone11ag1268 Cone-Chr11:9421252 0 wgd
Cone11ag1268 Cone-Chr11:9421252 Cone18ag0318 Cone-Chr18:1574066 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1268 K01537 - rcu:8278031 1771.9