Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1274 ATGTGTCATGAGCAAAAGGAAGTCAATAATGAGGCAGTGGAGGAAGGACAGGGTTTGGGATCATCTGAAGAATATGAACCTAGATTCAATGAGGTGACTCAAGATATAAATACCGGGCCTGTTGGGCCAGTTCAGGTTGGTGAGGGGTTGCAAATACCACAACAGCAGCCTCAAGGGAACGTGAGGTGGGATAGATTTCTTCCTGTCAGATCATTGAAGGTGTTACTCGTAGAGAATGATGATTCAACTCGCCATGTTGTCACTGCTCTATTAAGAAATTGCAGTTATGAAGTTGTAGCTGTTGGTAATGGTCATCAAGCATGGAAAATCTTAGAAGATGCAACTAATCATATCGAACTGGTTCTAACAGAGGTAGCATTGCCTGTATTATCTGGAATCGGTCTTTTGTGCAAGATTGTGAGCCATCAAAATTTAAAGAACATACCTGTGATAATGATGTCATCTCATGATTCTATGTCCACGGTCTTTAAGTGTTTGTCAAAGGGTGCAGTTGATTTTCTAGTTAAACCTATTCGGAAGAATGAACTTAAGAACCTCTGGCAGCATGTTTGGAGGAGATGCCACAGTTCTAGTGGCAGTGGGAGTGAAAGTGGGACACAGACCAAAAAATATGTTAAATCAAAAGGTAATGATGAATCTGAAAACAACTCTGGAAGTAGTGAGGAGCATTATGGTGGAAGCAATGGTCCGAGTATCAGGGGTGGGAGTGACAATGGGAGTGGCACTCAGAGTTCTTGGACGAAAAGGGCAGCTGAAGATGACAGAGCCCAACCAACATCACCTCAGACTCAGTGGCGTGATGCTCCTGACAGCATCTGTGCCCAGGTGACTGATACAAAACCTGAAAAACATAGCAACATTGAGATTCATGCCACTGAAATGAAGCAGTTCCTAGAACACGCTGATAAACTTGACAATGTTTCGATAGGTAAAGACTTGGAATTGGGAGTCTCTAAAAATTTGCATTTACATTACACCTATCAACAAGAGAAATTGCCTATCCATTCAACGAGCAAGAAGCAGAATAGATCAACTGAAATAGATGGTAAACCATTTGATAATGGACAGCTGGAACAGAATGGTGAGAACTTAACTGGAAGAACCAGAAACCAAGCTCCCAATATGGTGGGTGCAGTCTTCAATTGTGCCAATCCACATGGAGAAACCAGAAACTTTGAGAAAACCAGTAGGCTTTGTGATAACCCACAAATTAAACCGGAAGGTGATTCTGAAGGACTTCCATCACTTGAGCTAACTTTGAAGAGGCTCGGAGGAGTAGGCAATGTTGGAAACATTGCAAGTGAAGACCGCAATGTCTTGAGACATTCAGGTCTATCAGCATTTTCTAAATACAACTCTGCCTCCTCCTCTAATCAGGCTCCAACAGCAAATGCAGGAAGCTGTTCTCCACTTGAAAACAGTCCAGTTGCACCAAATAAAGCTACCCCACTAGATTTCCCATCTATTTCCAATGGCACTGATACAAATCATCAGCCTAATGAGAATAATTGCAACAATGAGACGACCTCTACCAGTAAATGCACCATCCCTAAGCCAGAAACCATAAATGAGAAGCCAGAATCAAGATCCACATTTCTACCTTTTCATTCTTCTGGCGCTAGTAATTCAACCCAGAAAGCACCCATGATGGGAGAAGATACTAAAATGGTTCAAGCCCAAGCAACTGTTAGAGACTCGCAACCCCCTGTTCAAGTCCAACACCACCACCACCACCACCACCATTACCACCACCACCTCCATAGCATGCAACATCACCAACCAGAACAGACAGAGAACAATGATATAACGTTGAATAACATGGAAGAAACTGCTCAGCATTGTGGGTCGTCAAATGATTTTGGGGGCAATATTGAAAGCAATGCTGGCAACTATAGTGTCAATGGAAGTGCTTCTGGTAGTAATCATGTAAGCAATAATGGACAGAATGGAAACAGAATCGCTGTTAATGCTGGAACAAGGAATGTGGAAAGTGATAATGGAGTAGTAGGGATAAACAGTGGAAGTGGAGTAGACAAAGATCGGGCTGCTCAAAGAGAGGCTGCCTTGAACAAATTTCGGCAAAAGAGGAAAGAAAGATGCTTTGAGAAGAAGTTCAGGTACGATATCATAGCAGGAAGAAATTGGCTGAACAGAGACCTCGAATTCGTGGACAATTTGTTCGACAAATAG 2211 42.61 MCHEQKEVNNEAVEEGQGLGSSEEYEPRFNEVTQDINTGPVGPVQVGEGLQIPQQQPQGNVRWDRFLPVRSLKVLLVENDDSTRHVVTALLRNCSYEVVAVGNGHQAWKILEDATNHIELVLTEVALPVLSGIGLLCKIVSHQNLKNIPVIMMSSHDSMSTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTKKYVKSKGNDESENNSGSSEEHYGGSNGPSIRGGSDNGSGTQSSWTKRAAEDDRAQPTSPQTQWRDAPDSICAQVTDTKPEKHSNIEIHATEMKQFLEHADKLDNVSIGKDLELGVSKNLHLHYTYQQEKLPIHSTSKKQNRSTEIDGKPFDNGQLEQNGENLTGRTRNQAPNMVGAVFNCANPHGETRNFEKTSRLCDNPQIKPEGDSEGLPSLELTLKRLGGVGNVGNIASEDRNVLRHSGLSAFSKYNSASSSNQAPTANAGSCSPLENSPVAPNKATPLDFPSISNGTDTNHQPNENNCNNETTSTSKCTIPKPETINEKPESRSTFLPFHSSGASNSTQKAPMMGEDTKMVQAQATVRDSQPPVQVQHHHHHHHHYHHHLHSMQHHQPEQTENNDITLNNMEETAQHCGSSNDFGGNIESNAGNYSVNGSASGSNHVSNNGQNGNRIAVNAGTRNVESDNGVVGINSGSGVDKDRAAQREAALNKFRQKRKERCFEKKFRYDIIAGRNWLNRDLEFVDNLFDK 736
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9470078 9474812 - Conep11aG0131800.1 Cone11ag1274 448526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1274 736 MobiDBLite consensus disorder prediction 459 555 - -
Cone11ag1274 736 MobiDBLite consensus disorder prediction 580 595 - -
Cone11ag1274 736 MobiDBLite consensus disorder prediction 195 277 - -
Cone11ag1274 736 MobiDBLite consensus disorder prediction 339 376 - -
Cone11ag1274 736 MobiDBLite consensus disorder prediction 491 525 - -
Cone11ag1274 736 SMART REC_2 72 187 IPR001789 GO:0000160(InterPro)
Cone11ag1274 736 SUPERFAMILY CheY-like 70 196 IPR011006 -
Cone11ag1274 736 MobiDBLite consensus disorder prediction 639 660 - -
Cone11ag1274 736 Gene3D - 71 221 - -
Cone11ag1274 736 Pfam Response regulator receiver domain 74 185 IPR001789 GO:0000160(InterPro)
Cone11ag1274 736 PANTHER TWO-COMPONENT RESPONSE REGULATOR 65 333 IPR045279 GO:0009736(InterPro)
Cone11ag1274 736 MobiDBLite consensus disorder prediction 1 24 - -
Cone11ag1274 736 MobiDBLite consensus disorder prediction 572 603 - -
Cone11ag1274 736 CDD psREC_PRR 74 177 - -
Cone11ag1274 736 MobiDBLite consensus disorder prediction 533 555 - -
Cone11ag1274 736 FunFam Two-component response regulator-like PRR37 72 230 - -
Cone11ag1274 736 ProSiteProfiles Response regulatory domain profile. 73 191 IPR001789 GO:0000160(InterPro)
Cone11ag1274 736 MobiDBLite consensus disorder prediction 459 483 - -
Cone11ag1274 736 MobiDBLite consensus disorder prediction 195 211 - -
Cone11ag1274 736 MobiDBLite consensus disorder prediction 226 254 - -
Cone11ag1274 736 MobiDBLite consensus disorder prediction 263 277 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1274 Cone-Chr11:9470078 Cone1ag1021 Cone-Chr1:55118294 7.52E-46 dispersed
Cone10ag0269 Cone-Chr10:1282359 Cone11ag1274 Cone-Chr11:9470078 2.29E-83 wgd
Cone11ag1091 Cone-Chr11:8511929 Cone11ag1274 Cone-Chr11:9470078 5.85E-125 wgd
Cone11ag1274 Cone-Chr11:9470078 Cone13ag1299 Cone-Chr13:9702566 2.62E-27 wgd
Cone11ag1274 Cone-Chr11:9470078 Cone18ag0310 Cone-Chr18:1521944 0 wgd
Cone11ag1274 Cone-Chr11:9470078 Cone19ag1288 Cone-Chr19:8731478 1.37E-86 wgd
Cone11ag1274 Cone-Chr11:9470078 Cone3ag0296 Cone-Chr3:1530099 5.05E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44377 PF09353 DUF1995 1.40E-48 No_clan Cone TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1274 K12129 - vvi:100246836 718.768