Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1276 ATGGATACGGAGAAGGAATCTATGGCTATGGAGGAAGCGAAAGGGGTTTCTACGTATGGAGGAAAATACGTTCAGTACAACATTCTCGGCAACATCTTTGAGGTCTCCGCCAAGTACGTCCCTCCAATTCAACCGGTTGGTCGTGGTGCATACGGCATCGTTTGCTGTGCAGTGAATTCCAAGACGAAAGAAGAGGTTGCAATCAAGAAGATAGGGAATGCATTTGACAACAGGATTGATGCCAAGAGGACTCTTCGAGAGATCAAACTCCTCTGTCACATGGATCATGACAATGTGATCAAAATCAAGGATATCGTTGTACCACCTGAGAGGGAAATTTTCAATGATGTGTATATAGTATATGAATTATTAGATACTGATCTCCATCAGATAATTTGCTCTAACCAGGCTCTTACAGATGATCACTGTCAGTATTTCCTATATCAACTATTGCGGGGTTTGAAATACATACACTCTGCCAATGTGTTGCACCGAGATCTAAAACCAAGTAACCTTCTTCTCAATGCAAATTGTGACCTCAAGATCTGTGATTTTGGGCTTGCAAGGACTACCTCAGAGACAGATTTTATGACCGAATACGTTGTAACACGCTGGTATAGAGCCCCTGAATTGCTGCTAAACTGCTCAGAATACACAGCAGCAATTGATATCTGGTCAGTTGGGTGCATTCTCATGGAAATTATAAAAAGGGAACCGCTATTTCCTGGTAGAGATTATGTACAGCAATTGGGTCTTATAACTGAGCTACTAGGTTCGCAGGATGATACTGATCTTGGATTTCTGAGAAGTGATAATGCTAGAAAATATGTTAAGCAGCTTCCTTACTTTCCCAAGAAACCCTTTTCCGAAAAGTTTCCGGATGTTTCCCCATTGGCACTAGATCTTGCAGAGAGGATGCTAGTCTTTGATCCAAGCAAAAGAATAAGTGTTGAGGAGGCATTGACTCACCCTTATTTAGTTAGTCTCCATGAGATCAACGAGGAGCCTACCTGCCCATCCCCTTTCGTCTTCGATTTTGAACAGACATCCTTGGGTGAAGAAGATATCAAGGATCTTATATGGAAGGAATCTCTCAACTTCAACCCCGAATTTATGGAGGAGTAA 1125 42.04 MDTEKESMAMEEAKGVSTYGGKYVQYNILGNIFEVSAKYVPPIQPVGRGAYGIVCCAVNSKTKEEVAIKKIGNAFDNRIDAKRTLREIKLLCHMDHDNVIKIKDIVVPPEREIFNDVYIVYELLDTDLHQIICSNQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILMEIIKREPLFPGRDYVQQLGLITELLGSQDDTDLGFLRSDNARKYVKQLPYFPKKPFSEKFPDVSPLALDLAERMLVFDPSKRISVEEALTHPYLVSLHEINEEPTCPSPFVFDFEQTSLGEEDIKDLIWKESLNFNPEFMEE 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9480935 9483964 - Conep11aG0132000.1 Cone11ag1276 448528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1276 374 ProSiteProfiles Protein kinase domain profile. 40 326 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag1276 374 FunFam Mitogen-activated protein kinase 124 353 - -
Cone11ag1276 374 FunFam Mitogen-activated protein kinase 25 135 - -
Cone11ag1276 374 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524(InterPro)
Cone11ag1276 374 SUPERFAMILY Protein kinase-like (PK-like) 43 332 IPR011009 -
Cone11ag1276 374 Gene3D Transferase(Phosphotransferase) domain 1 124 353 - -
Cone11ag1276 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag1276 374 Gene3D Phosphorylase Kinase; domain 1 23 363 - -
Cone11ag1276 374 SMART serkin_6 40 326 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag1276 374 ProSitePatterns MAP kinase signature. 75 178 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag1276 374 CDD STKc_TEY_MAPK 33 369 - -
Cone11ag1276 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 33 362 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cone11ag1276 374 Pfam Protein kinase domain 44 326 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1276 Cone-Chr11:9480935 Cone14ag0377 Cone-Chr14:1764585 1.77E-212 dispersed
Cone11ag1276 Cone-Chr11:9480935 Cone18ag0309 Cone-Chr18:1516153 1.09E-272 wgd
Cone11ag1276 Cone-Chr11:9480935 Cone5ag1201 Cone-Chr5:5436270 4.96E-186 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81913 PF00583 Acetyltransf_1 4.60E-15 CL0257 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1276 K04371 - mdm:103421855 665.611